Publications

Viral Markers

Moore PS, Chang Y. The conundrum of causality in tumor virology: the cases of KSHV and MCV. Semin Cancer Biol. 2014 Jun;264-12. doi: 10.1016/j.semcancer.2013.11.001. PubMed PMID: 24304907; PMCID: PMC4040341.
Li Z, Pantanowitz L, Khalbuss WE, Arya P, Monaco SE. Challenges in diagnosing metastatic breast carcinoma in fluid cytology. Diagn Cytopathol. 2014 Nov;42(11):1006-8. doi: 10.1002/dc.23067. PubMed PMID: 24610775.
Mishra N, Pereira M, Rhodes RH, An P, Pipas JM, Jain K, Kapoor A, Briese T, Faust PL, Lipkin WI. Identification of a novel polyomavirus in a pancreatic transplant recipient with retinal blindness and vasculitic myopathy. J Infect Dis. 2014 Nov 15;210(10):1595-9. doi: 10.1093/infdis/jiu250. PubMed PMID: 24795478; PMCID: PMC4334791.
Forero A, Giacobbi NS, McCormick KD, Gjoerup OV, Bakkenist CJ, Pipas JM, Sarkar SN. Simian virus 40 large T antigen induces IFN-stimulated genes through ATR kinase. J Immunol. 2014 Jun 15;192(12):5933-42. doi: 10.4049/jimmunol.1303470. PubMed PMID: 24799566; PMCID: PMC4078001.
Chang PY, Detels R, Martínez-Maza O, Zhang ZF, Jacobson LP, Margolick JB, Variakojis D, Rinaldo CR Jr, Hussain SK. Comment on "characteristics of B-cell lymphomas in HIV/HCV-coinfected patients during the combined antiretroviral therapy era: an ANRS CO16 LYMPHOVIR cohort study". J Acquir Immune Defic Syndr. 2014 Oct 1;67(2):e84-6. doi: 10.1097/QAI.0000000000000204. PubMed PMID: 24820108; PMCID: PMC4162807.
Nolen BM, Breen EC, Bream JH, Jenkins FJ, Kingsley LA, Rinaldo CR, Lokshin AE. Circulating mediators of inflammation and immune activation in AIDS-related non-hodgkin lymphoma. PLoS One. 2014;9(6):e99144. doi: 10.1371/journal.pone.0099144. PubMed PMID: 24922518; PMCID: PMC4055650.
Forero A, McCormick KD, Jenkins FJ, Sarkar SN. Downregulation of IRF4 induces lytic reactivation of KSHV in primary effusion lymphoma cells. Virology. 2014 Jun;458-4594-10. doi: 10.1016/j.virol.2014.04.020. PubMed PMID: 24928034; PMCID: PMC4058074.
Zhu J, Zhang Y, Ghosh A, Cuevas RA, Forero A, Dhar J, Ibsen MS, Schmid-Burgk JL, Schmidt T, Ganapathiraju MK, Fujita T, Hartmann R, Barik S, Hornung V, Coyne CB, Sarkar SN. Antiviral activity of human OASL protein is mediated by enhancing signaling of the RIG-I RNA sensor. Immunity. 2014 Jun 19;40(6):936-48. doi: 10.1016/j.immuni.2014.05.007. PubMed PMID: 24931123; PMCID: PMC4101812.
Yu X, Bian X, Throop A, Song L, Moral LD, Park J, Seiler C, Fiacco M, Steel J, Hunter P, Saul J, Wang J, Qiu J, Pipas JM, LaBaer J. Exploration of panviral proteome: high-throughput cloning and functional implications in virus-host interactions. Theranostics. 2014;4(8):808-22. doi: 10.7150/thno.8255. PubMed PMID: 24955142; PMCID: PMC4063979.
Sáenz Robles MT, Chong JL, Koivisto C, Trimboli A, Liu H, Leone G, Pipas JM. Viral oncogene expression in the stem/progenitor cell compartment of the mouse intestine induces adenomatous polyps. Mol Cancer Res. 2014 Oct;12(10):1355-64. doi: 10.1158/1541-7786.MCR-14-0166. PubMed PMID: 24994749; PMCID: PMC4201981.
Hensler HR, Tomaszewski MJ, Rappocciolo G, Rinaldo CR, Jenkins FJ. Human herpesvirus 8 glycoprotein B binds the entry receptor DC-SIGN. Virus Res. 2014 Sep 22;19097-103. doi: 10.1016/j.virusres.2014.07.003. PubMed PMID: 25018023; PMCID: PMC4142096.
Shridhar V, Chen Y, Gupta P. The CD8 antiviral factor (CAF) can suppress HIV-1 transcription from the long terminal repeat (LTR) promoter in the absence of elements upstream of the CATATAA box. Virol J. 2014 Jul 21;11130. doi: 10.1186/1743-422X-11-130. PubMed PMID: 25048949; PMCID: PMC4223764.
Cucoranu IC, Parwani AV, Vepa S, Weinstein RS, Pantanowitz L. Digital pathology: A systematic evaluation of the patent landscape. J Pathol Inform. 2014;5(1):16. doi: 10.4103/2153-3539.133112. PubMed PMID: 25057430; PMCID: PMC4060404.
Xue M, Yao S, Hu M, Li W, Hao T, Zhou F, Zhu X, Lu H, Qin D, Yan Q, Zhu J, Gao SJ, Lu C. HIV-1 Nef and KSHV oncogene K1 synergistically promote angiogenesis by inducing cellular miR-718 to regulate the PTEN/AKT/mTOR signaling pathway. Nucleic Acids Res. 2014 Sep;42(15):9862-79. doi: 10.1093/nar/gku583. PubMed PMID: 25104021; PMCID: PMC4150761.
Seneca NTM, Sáenz Robles MT, Pipas JM. Removal of a small C-terminal region of JCV and SV40 large T antigens has differential effects on transformation. Virology. 2014 Nov;468-47047-56. doi: 10.1016/j.virol.2014.07.038. PubMed PMID: 25129438; PMCID: PMC4253650.
Yang S, Deng P, Zhu Z, Zhu J, Wang G, Zhang L, Chen AF, Wang T, Sarkar SN, Billiar TR, Wang Q. Adenosine deaminase acting on RNA 1 limits RIG-I RNA detection and suppresses IFN production responding to viral and endogenous RNAs. J Immunol. 2014 Oct 1;193(7):3436-45. doi: 10.4049/jimmunol.1401136. PubMed PMID: 25172485; PMCID: PMC4169998.
Knowlton ER, Rappocciolo G, Piazza P, Lepone LM, Nadgir SV, Bullotta A, Berendam SJ, Li J, Reinhart TA, Jenkins FJ, Rinaldo CR. Human herpesvirus 8 induces polyfunctional B lymphocytes that drive Kaposi's sarcoma. mBio. 2014 Sep 2;5(5):e01277-14. doi: 10.1128/mBio.01277-14. PubMed PMID: 25182322; PMCID: PMC4173773.
Roy S, Pantanowitz L, Amin M, Seethala RR, Ishtiaque A, Yousem SA, Parwani AV, Cucoranu I, Hartman DJ. Smartphone adapters for digital photomicrography. J Pathol Inform. 2014;5(1):24. doi: 10.4103/2153-3539.137728. PubMed PMID: 25191623; PMCID: PMC4141421.
Yeh FC, Parwani AV, Pantanowitz L, Ho C. Automated grading of renal cell carcinoma using whole slide imaging. J Pathol Inform. 2014;5(1):23. doi: 10.4103/2153-3539.137726. PubMed PMID: 25191622; PMCID: PMC4141422.
Campbell DM, Rappocciolo G, Jenkins FJ, Rinaldo CR. Dendritic cells: key players in human herpesvirus 8 infection and pathogenesis. Front Microbiol. 2014;5452. doi: 10.3389/fmicb.2014.00452. PubMed PMID: 25221546; PMCID: PMC4148009.
Fraietta JA, Mueller YM, Lozenski KL, Ratner D, Boesteanu AC, Hancock AS, Lackman-Smith C, Zentner IJ, Chaiken IM, Chung S, LeGrice SF, Snyder BA, Mankowski MK, Jones NM, Hope JL, Gupta P, Anderson SH, Wigdahl B, Katsikis PD. Abasic phosphorothioate oligomers inhibit HIV-1 reverse transcription and block virus transmission across polarized ectocervical organ cultures. Antimicrob Agents Chemother. 2014 Dec;58(12):7056-71. doi: 10.1128/AAC.02991-14. PubMed PMID: 25224013; PMCID: PMC4249537.
Kwun HJ, Toptan T, Ramos da Silva S, Atkins JF, Moore PS, Chang Y. Human DNA tumor viruses generate alternative reading frame proteins through repeat sequence recoding. Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):E4342-9. doi: 10.1073/pnas.1416122111. PubMed PMID: 25271323; PMCID: PMC4205619.
Rhoads DD, Sintchenko V, Rauch CA, Pantanowitz L. Clinical microbiology informatics. Clin Microbiol Rev. 2014 Oct;27(4):1025-47. doi: 10.1128/CMR.00049-14. PubMed PMID: 25278581; PMCID: PMC4187636.
Ohkuri T, Ghosh A, Kosaka A, Zhu J, Ikeura M, David M, Watkins SC, Sarkar SN, Okada H. STING contributes to antiglioma immunity via triggering type I IFN signals in the tumor microenvironment. Cancer Immunol Res. 2014 Dec;2(12):1199-208. doi: 10.1158/2326-6066.CIR-14-0099. PubMed PMID: 25300859; PMCID: PMC4258479.
Katz JP, Pipas JM. SummonChimera infers integrated viral genomes with nucleotide precision from NGS data. BMC Bioinformatics. 2014 Oct 22;15348. doi: 10.1186/s12859-014-0348-4. PubMed PMID: 25331652; PMCID: PMC4210586.
Chang Y, Moore P. Twenty years of KSHV. Viruses. 2014 Nov 7;6(11):4258-64. doi: 10.3390/v6114258. PubMed PMID: 25386844; PMCID: PMC4246220.
Ireland AW, Gobillot TA, Gupta T, Seguin SP, Liang M, Resnick L, Goldberg MT, Manos-Turvey A, Pipas JM, Wipf P, Brodsky JL. Synthesis and structure–activity relationships of small molecule inhibitors of the simian virus 40 T antigen oncoprotein, an anti-polyomaviral target. Bioorg Med Chem. 2014 Nov 15;22(22):6490-6502. doi: 10.1016/j.bmc.2014.09.019. PubMed PMID: 25440730; PMCID: PMC4293281.
Smith KN, Mailliard RB, Rinaldo CR. Programming T cell Killers for an HIV Cure: Teach the New Dogs New Tricks and Let the Sleeping Dogs Lie. For Immunopathol Dis Therap. 2015;6(1-2):67-77. doi: 10.1615/ForumImmunDisTher.2016014160. PubMed PMID: 28344852; PMCID: PMC5363401.
Singhal RL, Monaco SE, Pantanowitz L. Cytopathology of myeloid sarcoma: a study of 16 cases. J Am Soc Cytopathol. 2015 Mar - Apr;4(2):98-103. doi: 10.1016/j.jasc.2014.10.001. PubMed PMID: 31051716.
Giacobbi NS, Gupta T, Coxon AT, Pipas JM. Polyomavirus T antigens activate an antiviral state. Virology. 2015 Feb;476377-385. doi: 10.1016/j.virol.2014.12.032. PubMed PMID: 25589241; PMCID: PMC4323618.
Schneider F, Smith MA, Lane MC, Pantanowitz L, Dacic S, Ohori NP. Adequacy of core needle biopsy specimens and fine-needle aspirates for molecular testing of lung adenocarcinomas. Am J Clin Pathol. 2015 Feb;143(2):193-200; quiz 306. doi: 10.1309/AJCPMY8UI7WSFSYY. PubMed PMID: 25596245.
Kwun HJ, Shuda M, Camacho CJ, Gamper AM, Thant M, Chang Y, Moore PS. Restricted protein phosphatase 2A targeting by Merkel cell polyomavirus small T antigen. J Virol. 2015 Apr;89(8):4191-200. doi: 10.1128/JVI.00157-15. PubMed PMID: 25631078; PMCID: PMC4442354.
Cantalupo PG, Katz JP, Pipas JM. HeLa nucleic acid contamination in the cancer genome atlas leads to the misidentification of human papillomavirus 18. J Virol. 2015 Apr;89(8):4051-7. doi: 10.1128/JVI.03365-14. PubMed PMID: 25631090; PMCID: PMC4442357.
Zhu J, Ghosh A, Sarkar SN. OASL-a new player in controlling antiviral innate immunity. Curr Opin Virol. 2015 Jun;1215-9. doi: 10.1016/j.coviro.2015.01.010. PubMed PMID: 25676874; PMCID: PMC4470762.
Wendzicki JA, Moore PS, Chang Y. Large T and small T antigens of Merkel cell polyomavirus. Curr Opin Virol. 2015 Apr;1138-43. doi: 10.1016/j.coviro.2015.01.009. PubMed PMID: 25681708; PMCID: PMC4456251.
Gupta T, Sáenz Robles MT, Pipas JM. Cellular transformation of mouse embryo fibroblasts in the absence of activator E2Fs. J Virol. 2015 May;89(9):5124-33. doi: 10.1128/JVI.03578-14. PubMed PMID: 25717106; PMCID: PMC4403490.
Herbeck J, Ghorai S, Chen L, Rinaldo CR, Margolick JB, Detels R, Jacobson L, Wolinsky S, Mullins JI. p21(WAF1/CIP1) RNA expression in highly HIV-1 exposed, uninfected individuals. PLoS One. 2015;10(3):e0119218. doi: 10.1371/journal.pone.0119218. PubMed PMID: 25746435; PMCID: PMC4352077.
Lachmann J, Glaubke E, Moore PS, Ungermann C. The Vps39-like TRAP1 is an effector of Rab5 and likely the missing Vps3 subunit of human CORVET. Cell Logist. 2014 Oct-Dec;4(4):e970840. doi: 10.4161/21592780.2014.970840. PubMed PMID: 25750764; PMCID: PMC4325178.
An P, Brodsky JL, Pipas JM. The conserved core enzymatic activities and the distinct dynamics of polyomavirus large T antigens. Arch Biochem Biophys. 2015 May 1;57323-31. doi: 10.1016/j.abb.2015.02.033. PubMed PMID: 25752954; PMCID: PMC4865250.
Pantanowitz L, McHugh J, Cable W, Zhao C, Parwani AV. Imaging file management to support international telepathology. J Pathol Inform. 2015;617. doi: 10.4103/2153-3539.153917. PubMed PMID: 25838969; PMCID: PMC4382758.
Evans AJ, Krupinski EA, Weinstein RS, Pantanowitz L. 2014 American Telemedicine Association clinical guidelines for telepathology: Another important step in support of increased adoption of telepathology for patient care. J Pathol Inform. 2015;613. doi: 10.4103/2153-3539.153906. PubMed PMID: 25838965; PMCID: PMC4382756.
Shuda M, Velásquez C, Cheng E, Cordek DG, Kwun HJ, Chang Y, Moore PS. CDK1 substitutes for mTOR kinase to activate mitotic cap-dependent protein translation. Proc Natl Acad Sci U S A. 2015 May 12;112(19):5875-82. doi: 10.1073/pnas.1505787112. PubMed PMID: 25883264; PMCID: PMC4434708.
Ibsen MS, Gad HH, Andersen LL, Hornung V, Julkunen I, Sarkar SN, Hartmann R. Structural and functional analysis reveals that human OASL binds dsRNA to enhance RIG-I signaling. Nucleic Acids Res. 2015 May 26;43(10):5236-48. doi: 10.1093/nar/gkv389. PubMed PMID: 25925578; PMCID: PMC4446440.
Zhang H, Cockrell SK, Kolawole AO, Rotem A, Serohijos AW, Chang CB, Tao Y, Mehoke TS, Han Y, Lin JS, Giacobbi NS, Feldman AB, Shakhnovich E, Weitz DA, Wobus CE, Pipas JM. Isolation and Analysis of Rare Norovirus Recombinants from Coinfected Mice Using Drop-Based Microfluidics. J Virol. 2015 Aug;89(15):7722-34. doi: 10.1128/JVI.01137-15. PubMed PMID: 25972549; PMCID: PMC4505660.
Wasil LR, Wei L, Chang C, Lan L, Shair KH. Regulation of DNA Damage Signaling and Cell Death Responses by Epstein-Barr Virus Latent Membrane Protein 1 (LMP1) and LMP2A in Nasopharyngeal Carcinoma Cells. J Virol. 2015 Aug;89(15):7612-24. doi: 10.1128/JVI.00958-15. PubMed PMID: 25972552; PMCID: PMC4505682.
Hanna MG, Pantanowitz L, Evans AJ. Overview of contemporary guidelines in digital pathology: what is available in 2015 and what still needs to be addressed? J Clin Pathol. 2015 Jul;68(7):499-505. doi: 10.1136/jclinpath-2015-202914. PubMed PMID: 25979986.
Farahani N, Pantanowitz L. Overview of Telepathology. Surg Pathol Clin. 2015 Jun;8(2):223-31. doi: 10.1016/j.path.2015.02.018. PubMed PMID: 26065796.
Hanna MG, Pantanowitz L. Bar Coding and Tracking in Pathology. Surg Pathol Clin. 2015 Jun;8(2):123-35. doi: 10.1016/j.path.2015.02.017. PubMed PMID: 26065787.
Rhoads DD, Novak SM, Pantanowitz L. A review of the current state of digital plate reading of cultures in clinical microbiology. J Pathol Inform. 2015;623. doi: 10.4103/2153-3539.157789. PubMed PMID: 26110091; PMCID: PMC4466785.
Pantanowitz L, Carbone A, Dolcetti R. Microenvironment and HIV-related lymphomagenesis. Semin Cancer Biol. 2015 Oct;3452-7. doi: 10.1016/j.semcancer.2015.06.002. PubMed PMID: 26118690.
Ohkuri T, Ghosh A, Kosaka A, Sarkar SN, Okada H. Protective role of STING against gliomagenesis: Rational use of STING agonist in anti-glioma immunotherapy. Oncoimmunology. 2015 Apr;4(4):e999523. doi: 10.1080/2162402X.2014.999523. PubMed PMID: 26137417; PMCID: PMC4485761.
Seaberg EC, Witt MD, Jacobson LP, Detels R, Rinaldo CR, Margolick JB, Young S, Phair JP, Thio CL. Spontaneous Clearance of the Hepatitis C Virus Among Men Who Have Sex With Men. Clin Infect Dis. 2015 Nov 1;61(9):1381-8. doi: 10.1093/cid/civ562. PubMed PMID: 26175521; PMCID: PMC4599393.
He T, Brocca-Cofano E, Gillespie DG, Xu C, Stock JL, Ma D, Policicchio BB, Raehtz KD, Rinaldo CR, Apetrei C, Jackson EK, Macatangay BJ, Pandrea I. Critical Role for the Adenosine Pathway in Controlling Simian Immunodeficiency Virus-Related Immune Activation and Inflammation in Gut Mucosal Tissues. J Virol. 2015 Sep;89(18):9616-30. doi: 10.1128/JVI.01196-15. PubMed PMID: 26178986; PMCID: PMC4542384.
Dhar J, Cuevas RA, Goswami R, Zhu J, Sarkar SN, Barik S. 2'-5'-Oligoadenylate Synthetase-Like Protein Inhibits Respiratory Syncytial Virus Replication and Is Targeted by the Viral Nonstructural Protein 1. J Virol. 2015 Oct;89(19):10115-9. doi: 10.1128/JVI.01076-15. PubMed PMID: 26178980; PMCID: PMC4577923.
Liu H, Tang X, Srivastava A, Pécot T, Daniel P, Hemmelgarn B, Reyes S, Fackler N, Bajwa A, Kladney R, Koivisto C, Chen Z, Wang Q, Huang K, Machiraju R, Sáenz-Robles MT, Cantalupo P, Pipas JM, Leone G. Redeployment of Myc and E2f1-3 drives Rb-deficient cell cycles. Nat Cell Biol. 2015 Aug;17(8):1036-48. doi: 10.1038/ncb3210. PubMed PMID: 26192440; PMCID: PMC4526313.
Tao Y, Rotem A, Zhang H, Cockrell SK, Koehler SA, Chang CB, Ung LW, Cantalupo PG, Ren Y, Lin JS, Feldman AB, Wobus CE, Pipas JM, Weitz DA. Artifact-Free Quantification and Sequencing of Rare Recombinant Viruses by Using Drop-Based Microfluidics. Chembiochem. 2015 Oct 12;16(15):2167-71. doi: 10.1002/cbic.201500384. PubMed PMID: 26247541.
Flores RR, Kim E, Zhou L, Yang C, Zhao J, Gambotto A, Robbins PD. IL-Y, a synthetic member of the IL-12 cytokine family, suppresses the development of type 1 diabetes in NOD mice. Eur J Immunol. 2015 Nov;45(11):3114-25. doi: 10.1002/eji.201445403. PubMed PMID: 26260044; PMCID: PMC4823813.
Hanna MG, Parwani AV, Pantanowitz L, Punjabi V, Singh R. Smartphone applications: A contemporary resource for dermatopathology. J Pathol Inform. 2015;644. doi: 10.4103/2153-3539.161612. PubMed PMID: 26284155; PMCID: PMC4530504.
Han HS, Cantalupo PG, Rotem A, Cockrell SK, Carbonnaux M, Pipas JM, Weitz DA. Whole-Genome Sequencing of a Single Viral Species from a Highly Heterogeneous Sample. Angew Chem Int Ed Engl. 2015 Nov 16;54(47):13985-8. doi: 10.1002/anie.201507047. PubMed PMID: 26316088; PMCID: PMC4715630.
Trejo Bittar HE, Pantanowitz L. Merkel Cell Polyomavirus is Not Detected in Lung Adenocarcinomas by Immunohistochemistry. Appl Immunohistochem Mol Morphol. 2016 Jul;24(6):427-30. doi: 10.1097/PAI.0000000000000210. PubMed PMID: 26317307.
Xing J, Radkay L, Monaco SE, Roth CG, Pantanowitz L. Cerebrospinal Fluid Cytology of Lyme Neuroborreliosis: A Report of 3 Cases with Literature Review. Acta Cytol. 2015;59(4):339-44. doi: 10.1159/000439160. PubMed PMID: 26343489.
Pan TJ, Pantanowitz L, Weiss KR. High-Grade Leiomyosarcoma Arising in a Previously Replanted Limb. Case Rep Oncol Med. 2015;2015172603. doi: 10.1155/2015/172603. PubMed PMID: 26366310; PMCID: PMC4561096.
Shu Q, Lennemann NJ, Sarkar SN, Sadovsky Y, Coyne CB. ADAP2 Is an Interferon Stimulated Gene That Restricts RNA Virus Entry. PLoS Pathog. 2015 Sep;11(9):e1005150. doi: 10.1371/journal.ppat.1005150. PubMed PMID: 26372645; PMCID: PMC4570769.
Hu M, Wang C, Li W, Lu W, Bai Z, Qin D, Yan Q, Zhu J, Krueger BJ, Renne R, Gao SJ, Lu C. A KSHV microRNA Directly Targets G Protein-Coupled Receptor Kinase 2 to Promote the Migration and Invasion of Endothelial Cells by Inducing CXCR2 and Activating AKT Signaling. PLoS Pathog. 2015 Sep;11(9):e1005171. doi: 10.1371/journal.ppat.1005171. PubMed PMID: 26402907; PMCID: PMC4581863.
Hartman DJ, Pantanowitz L. Safety Assurance Factors for Electronic Health Record Resilience (SAFER) Guidelines. Arch Pathol Lab Med. 2015 Oct;139(10):1201-4. doi: 10.5858/arpa.2015-0155-LE. PubMed PMID: 26414462.
Dwyer J, Pantanowitz L, Ohori NP, Pai RK, Vrbin C, Brand RE, Monaco SE. Endoscopic ultrasound-guided FNA and ProCore biopsy in sampling pancreatic and intra-abdominal masses. Cancer Cytopathol. 2016 Feb;124(2):110-21. doi: 10.1002/cncy.21623. PubMed PMID: 26430767.
Yao S, Hu M, Hao T, Li W, Xue X, Xue M, Zhu X, Zhou F, Qin D, Yan Q, Zhu J, Gao SJ, Lu C. MiRNA-891a-5p mediates HIV-1 Tat and KSHV Orf-K1 synergistic induction of angiogenesis by activating NF-κB signaling. Nucleic Acids Res. 2015 Oct 30;43(19):9362-78. doi: 10.1093/nar/gkv988. PubMed PMID: 26446987; PMCID: PMC4627096.
Shuda M, Chang Y, Moore PS. Mitotic 4E-BP1 hyperphosphorylation and cap-dependent translation. Cell Cycle. 2015;14(19):3005-6. doi: 10.1080/15384101.2015.1084192. PubMed PMID: 26496165; PMCID: PMC4825615.
Gupta T, Robles MT, Schowalter RM, Buck CB, Pipas JM. Expression of the small T antigen of Lymphotropic Papovavirus is sufficient to transform primary mouse embryo fibroblasts. Virology. 2016 Jan;487112-20. doi: 10.1016/j.virol.2015.10.003. PubMed PMID: 26517398; PMCID: PMC4679568.
Shuda M, Guastafierro A, Geng X, Shuda Y, Ostrowski SM, Lukianov S, Jenkins FJ, Honda K, Maricich SM, Moore PS, Chang Y. Merkel Cell Polyomavirus Small T Antigen Induces Cancer and Embryonic Merkel Cell Proliferation in a Transgenic Mouse Model. PLoS One. 2015;10(11):e0142329. doi: 10.1371/journal.pone.0142329. PubMed PMID: 26544690; PMCID: PMC4636375.
Jain S, Palekar A, Monaco SE, Craig FE, Bejjani G, Pantanowitz L. Human Immunodeficiency Virus-associated primary effusion lymphoma: An exceedingly rare entity in cerebrospinal fluid. Cytojournal. 2015;1222. doi: 10.4103/1742-6413.168059. PubMed PMID: 26604975; PMCID: PMC4630777.
Macatangay BJ, Riddler SA, Wheeler ND, Spindler J, Lawani M, Hong F, Buffo MJ, Whiteside TL, Kearney MF, Mellors JW, Rinaldo CR. Therapeutic Vaccination With Dendritic Cells Loaded With Autologous HIV Type 1-Infected Apoptotic Cells. J Infect Dis. 2016 May 1;213(9):1400-9. doi: 10.1093/infdis/jiv582. PubMed PMID: 26647281; PMCID: PMC4813736.
Carbone A, Pantanowitz L. TAFRO syndrome: An atypical variant of KSHV-negative multicentric Castleman disease. Am J Hematol. 2016 Feb;91(2):171-2. doi: 10.1002/ajh.24274. PubMed PMID: 26663467.
McDermott SP, Pantanowitz L, Nikiforova M, Monaco SE. Quantitative assessment of cell block cellularity and correlation with molecular testing adequacy in lung cancer. J Am Soc Cytopathol. 2016 Jul - Aug;5(4):196-202. doi: 10.1016/j.jasc.2015.11.001. PubMed PMID: 31042509.
Zhao C, Wu T, Ding X, Parwani AV, Chen H, McHugh J, Piccoli A, Xie Q, Lauro GR, Feng X, Hartman DJ, Seethala RR, Wu S, Yousem S, Liang Y, Pantanowitz L. International telepathology consultation: Three years of experience between the University of Pittsburgh Medical Center and KingMed Diagnostics in China. J Pathol Inform. 2015;663. doi: 10.4103/2153-3539.170650. PubMed PMID: 26730353; PMCID: PMC4687159.
Garcia-Bates TM, Kim E, Concha-Benavente F, Trivedi S, Mailliard RB, Gambotto A, Ferris RL. Enhanced Cytotoxic CD8 T Cell Priming Using Dendritic Cell-Expressing Human Papillomavirus-16 E6/E7-p16INK4 Fusion Protein with Sequenced Anti-Programmed Death-1. J Immunol. 2016 Mar 15;196(6):2870-8. doi: 10.4049/jimmunol.1502027. PubMed PMID: 26851223; PMCID: PMC4779745.
Farahani N, Pantanowitz L. Overview of Telepathology. Clin Lab Med. 2016 Mar;36(1):101-12. doi: 10.1016/j.cll.2015.09.010. PubMed PMID: 26851668.
Hanna MG, Pantanowitz L. Bar Coding and Tracking in Pathology. Clin Lab Med. 2016 Mar;36(1):13-30. doi: 10.1016/j.cll.2015.09.003. PubMed PMID: 26851661.
Tang X, Liu H, Srivastava A, Pécot T, Chen Z, Wang Q, Huang K, Sáenz-Robles MT, Cantalupo P, Pipas J, Leone G. Transcriptome regulation and chromatin occupancy by E2F3 and MYC in mice. Sci Data. 2016 Feb 16;3160008. doi: 10.1038/sdata.2016.8. PubMed PMID: 26881867; PMCID: PMC4755127.
Roy S, LaFramboise WA, Nikiforov YE, Nikiforova MN, Routbort MJ, Pfeifer J, Nagarajan R, Carter AB, Pantanowitz L. Next-Generation Sequencing Informatics: Challenges and Strategies for Implementation in a Clinical Environment. Arch Pathol Lab Med. 2016 Sep;140(9):958-75. doi: 10.5858/arpa.2015-0507-RA. PubMed PMID: 26901284.
Roth CG, Gillespie-Twardy A, Marks S, Agha M, Raptis A, Hou JZ, Farah R, Lin Y, Qian Y, Pantanowitz L, Boyiadzis M. Flow Cytometric Evaluation of Double/Triple Hit Lymphoma. Oncol Res. 2016;23(3):137-46. doi: 10.3727/096504015X14500972666761. PubMed PMID: 26931436.
McCormick KD, Ghosh A, Trivedi S, Wang L, Coyne CB, Ferris RL, Sarkar SN. Innate immune signaling through differential RIPK1 expression promote tumor progression in head and neck squamous cell carcinoma. Carcinogenesis. 2016 May;37(5):522-9. doi: 10.1093/carcin/bgw032. PubMed PMID: 26992898; PMCID: PMC6086476.
Cuevas RA, Ghosh A, Wallerath C, Hornung V, Coyne CB, Sarkar SN. MOV10 Provides Antiviral Activity against RNA Viruses by Enhancing RIG-I-MAVS-Independent IFN Induction. J Immunol. 2016 May 1;196(9):3877-86. doi: 10.4049/jimmunol.1501359. PubMed PMID: 27016603; PMCID: PMC4868630.
Nason KS, Kirchner A, Schuchert MJ, Luketich JD, Christie NA, Pantanowitz L, Karunamurthy A, Monaco SE. Endobronchial Ultrasound-Transbronchial Needle Aspiration for Lymphoma in Patients With Low Suspicion for Lung Cancer and Mediastinal Lymphadenopathy. Ann Thorac Surg. 2016 May;101(5):1856-63. doi: 10.1016/j.athoracsur.2015.12.019. PubMed PMID: 27016425.
Toptan T, Yousem SA, Ho J, Matsushima Y, Stabile LP, Fernández-Figueras MT, Bhargava R, Ryo A, Moore PS, Chang Y. Survey for human polyomaviruses in cancer. JCI Insight. 2016 Feb;1(2): doi: 10.1172/jci.insight.85562. PubMed PMID: 27034991; PMCID: PMC4811373.
Li W, Jia X, Shen C, Zhang M, Xu J, Shang Y, Zhu K, Hu M, Yan Q, Qin D, Lee MS, Zhu J, Lu H, Krueger BJ, Renne R, Gao SJ, Lu C. A KSHV microRNA enhances viral latency and induces angiogenesis by targeting GRK2 to activate the CXCR2/AKT pathway. Oncotarget. 2016 May 31;7(22):32286-305. doi: 10.18632/oncotarget.8591. PubMed PMID: 27058419; PMCID: PMC5078013.
Rhoads DD, Habib-Bein NF, Hariri RS, Hartman DJ, Monaco SE, Lesniak A, Duboy J, Salama Mel-S, Pantanowitz L. Comparison of the diagnostic utility of digital pathology systems for telemicrobiology. J Pathol Inform. 2016;710. doi: 10.4103/2153-3539.177687. PubMed PMID: 27076988; PMCID: PMC4809116.
Buck CB, Van Doorslaer K, Peretti A, Geoghegan EM, Tisza MJ, An P, Katz JP, Pipas JM, McBride AA, Camus AC, McDermott AJ, Dill JA, Delwart E, Ng TF, Farkas K, Austin C, Kraberger S, Davison W, Pastrana DV, Varsani A. The Ancient Evolutionary History of Polyomaviruses. PLoS Pathog. 2016 Apr;12(4):e1005574. doi: 10.1371/journal.ppat.1005574. PubMed PMID: 27093155; PMCID: PMC4836724.
Sankapal S, Gupta P, Ratner D, Ding M, Shen C, Sanyal A, Stolz D, Cu-Uvin S, Ramratnam B, Chen Y. HIV Exposure to the Epithelia in Ectocervical and Colon Tissues Induces Inflammatory Cytokines Without Tight Junction Disruption. AIDS Res Hum Retroviruses. 2016 Oct/Nov;32(10-11):1054-1066. doi: 10.1089/AID.2015.0185. PubMed PMID: 27153934; PMCID: PMC5067867.
Pham HV, Pantanowitz L, Liu Y. Quantitative phase imaging to improve the diagnostic accuracy of urine cytology. Cancer Cytopathol. 2016 Sep;124(9):641-50. doi: 10.1002/cncy.21734. PubMed PMID: 27177072; PMCID: PMC5026558.
Gearhart TL, Montelaro RC, Schurdak ME, Pilcher CD, Rinaldo CR, Kodadek T, Park Y, Islam K, Yurko R, Marques ET Jr, Burke DS. Selection of a potential diagnostic biomarker for HIV infection from a random library of non-biological synthetic peptoid oligomers. J Immunol Methods. 2016 Aug;43585-9. doi: 10.1016/j.jim.2016.05.001. PubMed PMID: 27182050; PMCID: PMC4947968.
Xing J, Rodriguez EF, Monaco SE, Pantanowitz L. Cytopathology of Hepatobiliary-Related Actinomycosis. Acta Cytol. 2016;60(2):179-84. doi: 10.1159/000445971. PubMed PMID: 27199159.
Pradhan D, Monaco SE, Parwani AV, Ahmed I, Duboy J, Pantanowitz L. Evaluation of panoramic digital images using Panoptiq for frozen section diagnosis. J Pathol Inform. 2016;726. doi: 10.4103/2153-3539.181770. PubMed PMID: 27217976; PMCID: PMC4872477.
Guo H, Birsa J, Farahani N, Hartman DJ, Piccoli A, O'Leary M, McHugh J, Nyman M, Stratman C, Kvarnstrom V, Yousem S, Pantanowitz L. Digital pathology and anatomic pathology laboratory information system integration to support digital pathology sign-out. J Pathol Inform. 2016;723. doi: 10.4103/2153-3539.181767. PubMed PMID: 27217973; PMCID: PMC4872480.
Wong TM, Petrovsky N, Bissel SJ, Wiley CA, Ross TM. Delta inulin-derived adjuvants that elicit Th1 phenotype following vaccination reduces respiratory syncytial virus lung titers without a reduction in lung immunopathology. Hum Vaccin Immunother. 2016 Aug 2;12(8):2096-2105. doi: 10.1080/21645515.2016.1162931. PubMed PMID: 27215855; PMCID: PMC4994749.
Mirvish ED, Shuda M. Strategies for Human Tumor Virus Discoveries: From Microscopic Observation to Digital Transcriptome Subtraction. Front Microbiol. 2016;7676. doi: 10.3389/fmicb.2016.00676. PubMed PMID: 27242703; PMCID: PMC4865503.
Smith KN, Mailliard RB, Piazza PA, Fischer W, Korber BT, Fecek RJ, Ratner D, Gupta P, Mullins JI, Rinaldo CR. Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells. mBio. 2016 May 31;7(3): doi: 10.1128/mBio.00473-16. PubMed PMID: 27247230; PMCID: PMC4895106.
McKay HS, Bream JH, Margolick JB, Martínez-Maza O, Phair JP, Rinaldo CR, Abraham AG, Jacobson LP. Host factors associated with serologic inflammatory markers assessed using multiplex assays. Cytokine. 2016 Sep;8571-9. doi: 10.1016/j.cyto.2016.05.016. PubMed PMID: 27295613; PMCID: PMC5088708.
Xing J, Manos S, Monaco SE, Wilson DO, Pantanowitz L. Endobronchial Ultrasound-Guided Transbronchial Needle Aspiration: A Pilot Study to Evaluate the Utility of the ProCore Biopsy Needle for Lymph Node Sampling. Acta Cytol. 2016;60(3):254-9. doi: 10.1159/000446761. PubMed PMID: 27400235.
Velásquez C, Cheng E, Shuda M, Lee-Oesterreich PJ, Pogge von Strandmann L, Gritsenko MA, Jacobs JM, Moore PS, Chang Y. Mitotic protein kinase CDK1 phosphorylation of mRNA translation regulator 4E-BP1 Ser83 may contribute to cell transformation. Proc Natl Acad Sci U S A. 2016 Jul 26;113(30):8466-71. doi: 10.1073/pnas.1607768113. PubMed PMID: 27402756; PMCID: PMC4968757.
Adibi JJ, Zhao Y, Cartus AR, Gupta P, Davidson LA. Placental Mechanics in the Zika-Microcephaly Relationship. Cell Host Microbe. 2016 Jul 13;20(1):9-11. doi: 10.1016/j.chom.2016.06.013. PubMed PMID: 27414496.
Roy S, Pfeifer JD, LaFramboise WA, Pantanowitz L. Molecular digital pathology: progress and potential of exchanging molecular data. Expert Rev Mol Diagn. 2016 Sep;16(9):941-7. doi: 10.1080/14737159.2016.1206472. PubMed PMID: 27471996.
Silowash R, Pantanowitz L, Craig FE, Simons JP, Monaco SE. Utilization of Flow Cytometry in Pediatric Fine-Needle Aspiration Biopsy Specimens. Acta Cytol. 2016;60(4):344-353. doi: 10.1159/000448510. PubMed PMID: 27592067.
McKay HS, Bream JH, Margolick JB, Martínez-Maza O, Magpantay LI, Phair JP, Rinaldo CR, Abraham AG, Jacobson LP. Data on serologic inflammatory biomarkers assessed using multiplex assays and host characteristics in the Multicenter AIDS Cohort Study (MACS). Data Brief. 2016 Dec;9262-70. doi: 10.1016/j.dib.2016.08.019. PubMed PMID: 27668272; PMCID: PMC5024314.
Kim E, Erdos G, Huang S, Kenniston T, Falo LD Jr, Gambotto A. Preventative Vaccines for Zika Virus Outbreak: Preliminary Evaluation. EBioMedicine. 2016 Nov;13315-320. doi: 10.1016/j.ebiom.2016.09.028. PubMed PMID: 27717627; PMCID: PMC5264651.
Xing J, Roy S, Monaco SE, Pantanowitz L. Cytohistologic correlation of recurrent urothelial carcinoma detected in urinary diversion specimens. Cancer Cytopathol. 2017 Feb;125(2):120-127. doi: 10.1002/cncy.21786. PubMed PMID: 27741389.
Chen Y, Shen C, Guha D, Ding M, Kulich S, Ashimkhanova A, Rinaldo C, Seaberg E, Margolick JB, Stosor V, Martínez-Maza O, Gupta P. Identification of the transcripts associated with spontaneous HCV clearance in individuals co-infected with HIV and HCV. BMC Infect Dis. 2016 Nov 22;16(1):693. doi: 10.1186/s12879-016-2044-7. PubMed PMID: 27875997; PMCID: PMC5120459.
Roy-Chowdhuri S, Roy S, Monaco SE, Routbort MJ, Pantanowitz L. Big data from small samples: Informatics of next-generation sequencing in cytopathology. Cancer Cytopathol. 2017 Apr;125(4):236-244. doi: 10.1002/cncy.21805. PubMed PMID: 27918649.
Venkatachari NJ, Jain S, Walker L, Bivalkar-Mehla S, Chattopadhyay A, Bar-Joseph Z, Rinaldo C, Ragin A, Seaberg E, Levine A, Becker J, Martin E, Sacktor N, Ayyavoo V. Transcriptome analyses identify key cellular factors associated with HIV-1-associated neuropathogenesis in infected men. AIDS. 2017 Mar 13;31(5):623-633. doi: 10.1097/QAD.0000000000001379. PubMed PMID: 28005686; PMCID: PMC5389669.
Rigatti LH, Toptan T, Newsome JT, Moore PS, Chang Y. Identification and Characterization of Novel Rat Polyomavirus 2 in a Colony of X-SCID Rats by P-PIT assay. mSphere. 2016 Nov-Dec;1(6): doi: 10.1128/mSphere.00334-16. PubMed PMID: 28028546; PMCID: PMC5177731.
Starrett GJ, Marcelus C, Cantalupo PG, Katz JP, Cheng J, Akagi K, Thakuria M, Rabinowits G, Wang LC, Symer DE, Pipas JM, Harris RS, DeCaprio JA. Merkel Cell Polyomavirus Exhibits Dominant Control of the Tumor Genome and Transcriptome in Virus-Associated Merkel Cell Carcinoma. mBio. 2017 Jan 3;8(1): doi: 10.1128/mBio.02079-16. PubMed PMID: 28049147; PMCID: PMC5210499.
Moore PS, Chang Y. Common Commensal Cancer Viruses. PLoS Pathog. 2017 Jan;13(1):e1006078. doi: 10.1371/journal.ppat.1006078. PubMed PMID: 28103305; PMCID: PMC5245784.
Cantalupo PG, Buck CB, Pipas JM. Complete Genome Sequence of a Polyomavirus Recovered from a Pomona Leaf-Nosed Bat (Hipposideros pomona) Metagenome Data Set. Genome Announc. 2017 Jan 19;5(3): doi: 10.1128/genomeA.01053-16. PubMed PMID: 28104645; PMCID: PMC5255915.
Lepone LM, Rappocciolo G, Piazza PA, Campbell DM, Jenkins FJ, Rinaldo CR. Regulatory T Cell Effect on CD8+ T Cell Responses to Human Herpesvirus 8 Infection and Development of Kaposi's Sarcoma. AIDS Res Hum Retroviruses. 2017 Jul;33(7):668-674. doi: 10.1089/AID.2016.0155. PubMed PMID: 28121161; PMCID: PMC5512339.
Macatangay BJ, Yang M, Sun X, Morton J, De Gruttola V, Little S, Hogan C, Rinaldo CR, A5217 Team.. Brief Report: Changes in Levels of Inflammation After Antiretroviral Treatment During Early HIV Infection in AIDS Clinical Trials Group Study A5217. J Acquir Immune Defic Syndr. 2017 May 1;75(1):137-141. doi: 10.1097/QAI.0000000000001320. PubMed PMID: 28198712; PMCID: PMC5393630.
Hirsch AJ, Smith JL, Haese NN, Broeckel RM, Parkins CJ, Kreklywich C, DeFilippis VR, Denton M, Smith PP, Messer WB, Colgin LM, Ducore RM, Grigsby PL, Hennebold JD, Swanson T, Legasse AW, Axthelm MK, MacAllister R, Wiley CA, Nelson JA, Streblow DN. Zika Virus infection of rhesus macaques leads to viral persistence in multiple tissues. PLoS Pathog. 2017 Mar;13(3):e1006219. doi: 10.1371/journal.ppat.1006219. PubMed PMID: 28278237; PMCID: PMC5344528.
Welch JL, Madison MN, Margolick JB, Galvin S, Gupta P, Martínez-Maza O, Dash C, Okeoma CM. Effect of prolonged freezing of semen on exosome recovery and biologic activity. Sci Rep. 2017 Mar 24;745034. doi: 10.1038/srep45034. PubMed PMID: 28338013; PMCID: PMC5364471.
Gandhi RT, McMahon DK, Bosch RJ, Lalama CM, Cyktor JC, Macatangay BJ, Rinaldo CR, Riddler SA, Hogg E, Godfrey C, Collier AC, Eron JJ, Mellors JW, ACTG A5321 Team.. Levels of HIV-1 persistence on antiretroviral therapy are not associated with markers of inflammation or activation. PLoS Pathog. 2017 Apr;13(4):e1006285. doi: 10.1371/journal.ppat.1006285. PubMed PMID: 28426825; PMCID: PMC5398724.
Evans AJ, Salama ME, Henricks WH, Pantanowitz L. Implementation of Whole Slide Imaging for Clinical Purposes: Issues to Consider From the Perspective of Early Adopters. Arch Pathol Lab Med. 2017 Jul;141(7):944-959. doi: 10.5858/arpa.2016-0074-OA. PubMed PMID: 28440660.
Kwun HJ, Chang Y, Moore PS. Protein-mediated viral latency is a novel mechanism for Merkel cell polyomavirus persistence. Proc Natl Acad Sci U S A. 2017 May 16;114(20):E4040-E4047. doi: 10.1073/pnas.1703879114. PubMed PMID: 28461484; PMCID: PMC5441811.
Ho J, Pantanowitz L. Making Pathology Diagnoses with Glass or Digital Slides: Which Modality is Inferior? J Pathol Inform. 2017;814. doi: 10.4103/jpi.jpi_10_17. PubMed PMID: 28480117; PMCID: PMC5404353.
Sanyal A, Mailliard RB, Rinaldo CR, Ratner D, Ding M, Chen Y, Zerbato JM, Giacobbi NS, Venkatachari NJ, Patterson BK, Chargin A, Sluis-Cremer N, Gupta P. Novel assay reveals a large, inducible, replication-competent HIV-1 reservoir in resting CD4+ T cells. Nat Med. 2017 Jul;23(7):885-889. doi: 10.1038/nm.4347. PubMed PMID: 28553933; PMCID: PMC5505781.
Hanna MG, Monaco SE, Cuda J, Xing J, Ahmed I, Pantanowitz L. Comparison of glass slides and various digital-slide modalities for cytopathology screening and interpretation. Cancer Cytopathol. 2017 Sep;125(9):701-709. doi: 10.1002/cncy.21880. PubMed PMID: 28558124.
Abels E, Pantanowitz L. Current State of the Regulatory Trajectory for Whole Slide Imaging Devices in the USA. J Pathol Inform. 2017;823. doi: 10.4103/jpi.jpi_11_17. PubMed PMID: 28584684; PMCID: PMC5450449.
Sturgis CD, Monaco SE, Sakr H, Pantanowitz L. Cytologic perspectives on neoteric B-cell lymphoproliferative disorders. Diagn Cytopathol. 2017 Nov;45(11):1005-1019. doi: 10.1002/dc.23766. PubMed PMID: 28594112.
Hanna MG, Pantanowitz L. The role of informatics in patient-centered care and personalized medicine. Cancer Cytopathol. 2017 Jun;125(S6):494-501. doi: 10.1002/cncy.21833. PubMed PMID: 28609000.
Rappocciolo G, Jenkins F, Rinaldo CR. Comment on primary lymphocyte infection models for KSHV and its putative tumorigenesis mechanisms in B cell lymphomas (Journal of Microbiology 2017, 55(5): 319-329). J Microbiol. 2017 Jul;55(7):592-593. doi: 10.1007/s12275-017-0670-4. PubMed PMID: 28664522.
Xing J, Seigh L, Monaco SE, Ohori NP, Yousem SA, Amin R, Pantanowitz L. Critical diagnoses in cytopathology: Experience at a large medical center. Cancer Cytopathol. 2017 Sep;125(9):726-730. doi: 10.1002/cncy.21896. PubMed PMID: 28704594.
Agudelo-Hernandez A, Chen Y, Bullotta A, Buchanan WG, Klamar-Blain CR, Borowski L, Riddler SA, Rinaldo CR, Macatangay BJC. Subclinical herpesvirus shedding among HIV-1-infected men on antiretroviral therapy. AIDS. 2017 Sep 24;31(15):2085-2094. doi: 10.1097/QAD.0000000000001602. PubMed PMID: 28723708; PMCID: PMC5626452.
Lee JJ, Jedrych J, Pantanowitz L, Ho J. Validation of Digital Pathology for Primary Histopathological Diagnosis of Routine, Inflammatory Dermatopathology Cases. Am J Dermatopathol. 2018 Jan;40(1):17-23. doi: 10.1097/DAD.0000000000000888. PubMed PMID: 28763335.
Rappocciolo G, Jais M, Piazza PA, DeLucia DC, Jenkins FJ, Rinaldo CR. Human Herpesvirus 8 Infects and Replicates in Langerhans Cells and Interstitial Dermal Dendritic Cells and Impairs Their Function. J Virol. 2017 Oct 15;91(20): doi: 10.1128/JVI.00909-17. PubMed PMID: 28768873; PMCID: PMC5625489.
Goswami R, Shair KHY, Gershburg E. Molecular diversity of IgG responses to Epstein-Barr virus proteins in asymptomatic Epstein-Barr virus carriers. J Gen Virol. 2017 Sep;98(9):2343-2350. doi: 10.1099/jgv.0.000891. PubMed PMID: 28795661.
Martínez-Girón R, Pantanowitz L. Cerebrospinal fluid cytology in nonmalignant aseptic meningeal disorders. Diagn Cytopathol. 2017 Nov;45(11):1020-1029. doi: 10.1002/dc.23797. PubMed PMID: 28816034.
Griffith CC, Schmitt AC, Pantanowitz L, Monaco SE. A pattern-based risk-stratification scheme for salivary gland cytology: A multi-institutional, interobserver variability study to determine applicability. Cancer Cytopathol. 2017 Oct;125(10):776-785. doi: 10.1002/cncy.21906. PubMed PMID: 28834233; PMCID: PMC5647230.
Kwun HJ, Wendzicki JA, Shuda Y, Moore PS, Chang Y. Merkel cell polyomavirus small T antigen induces genome instability by E3 ubiquitin ligase targeting. Oncogene. 2017 Dec 7;36(49):6784-6792. doi: 10.1038/onc.2017.277. PubMed PMID: 28846109; PMCID: PMC5720911.
Chang Y, Moore PS, Weiss RA. Human oncogenic viruses: nature and discovery. Philos Trans R Soc Lond B Biol Sci. 2017 Oct 19;372(1732): doi: 10.1098/rstb.2016.0264. PubMed PMID: 28893931; PMCID: PMC5597731.
Pantanowitz L, Liu C, Huang Y, Guo H, Rohde GK. Impact of Altering Various Image Parameters on Human Epidermal Growth Factor Receptor 2 Image Analysis Data Quality. J Pathol Inform. 2017;839. doi: 10.4103/jpi.jpi_46_17. PubMed PMID: 28966838; PMCID: PMC5609390.
Farahani N, Braun A, Jutt D, Huffman T, Reder N, Liu Z, Yagi Y, Pantanowitz L. Three-dimensional Imaging and Scanning: Current and Future Applications for Pathology. J Pathol Inform. 2017;836. doi: 10.4103/jpi.jpi_32_17. PubMed PMID: 28966836; PMCID: PMC5609355.
Dantey K, Pantanowitz L. Iatrogenic solid tumors following immunosuppressive therapy. Semin Diagn Pathol. 2018 Jul;35(4):272-278. doi: 10.1053/j.semdp.2017.09.002. PubMed PMID: 29066044.
Guo ZS, Liu Z, Sathaiah M, Wang J, Ravindranathan R, Kim E, Huang S, Kenniston TW, Bell JC, Zeh HJ 3rd, Butterfield LH, Gambotto A, Bartlett DL. Rapid Generation of Multiple Loci-Engineered Marker-free Poxvirus and Characterization of a Clinical-Grade Oncolytic Vaccinia Virus. Mol Ther Methods Clin Dev. 2017 Dec 15;7112-122. doi: 10.1016/j.omtm.2017.09.007. PubMed PMID: 29085848; PMCID: PMC5651493.
Cantalupo PG, Katz JP, Pipas JM. Viral sequences in human cancer. Virology. 2018 Jan 1;513208-216. doi: 10.1016/j.virol.2017.10.017. PubMed PMID: 29107929; PMCID: PMC5828528.
Caves EA, Butch RM, Cook SA, Wasil LR, Chen C, Di YP, Lee N, Shair KHY. Latent Membrane Protein 1 Is a Novel Determinant of Epstein-Barr Virus Genome Persistence and Reactivation. mSphere. 2017 Nov-Dec;2(6): doi: 10.1128/mSphereDirect.00453-17. PubMed PMID: 29134204; PMCID: PMC5677982.
Chimelli L, Moura Pone S, Avvad-Portari E, Farias Meira Vasconcelos Z, Araújo Zin A, Prado Cunha D, Raposo Thompson N, Lopes Moreira ME, Wiley CA, da Silva Pone MV. Persistence of Zika Virus After Birth: Clinical, Virological, Neuroimaging, and Neuropathological Documentation in a 5-Month Infant With Congenital Zika Syndrome. J Neuropathol Exp Neurol. 2018 Mar 1;77(3):193-198. doi: 10.1093/jnen/nlx116. PubMed PMID: 29346650.
Johnson ME, Cantalupo PG, Pipas JM. Identification of Head and Neck Cancer Subtypes Based on Human Papillomavirus Presence and E2F-Regulated Gene Expression. mSphere. 2018 Jan-Feb;3(1): doi: 10.1128/mSphere.00580-17. PubMed PMID: 29359188; PMCID: PMC5760753.
Hanna MG, Ahmed I, Nine J, Prajapati S, Pantanowitz L. Augmented Reality Technology Using Microsoft HoloLens in Anatomic Pathology. Arch Pathol Lab Med. 2018 May;142(5):638-644. doi: 10.5858/arpa.2017-0189-OA. PubMed PMID: 29384690.
Bissel SJ, Gurnsey K, Jedema HP, Smith NF, Wang G, Bradberry CW, Wiley CA. Aged Chinese-origin rhesus macaques infected with SIV develop marked viremia in absence of clinical disease, inflammation or cognitive impairment. Retrovirology. 2018 Feb 1;15(1):17. doi: 10.1186/s12977-018-0400-y. PubMed PMID: 29391069; PMCID: PMC5796498.
Fraggetta F, Garozzo S, Zannoni GF, Pantanowitz L, Rossi ED. Routine Digital Pathology Workflow: The Catania Experience. J Pathol Inform. 2017;851. doi: 10.4103/jpi.jpi_58_17. PubMed PMID: 29416914; PMCID: PMC5760840.
Pantanowitz L, Preffer F, Wilbur DC. Advanced imaging technology applications in cytology. Diagn Cytopathol. 2019 Jan;47(1):5-14. doi: 10.1002/dc.23898. PubMed PMID: 29436153.
Pantanowitz L, Thompson LDR, Rossi ED. Diagnostic Approach to Fine Needle Aspirations of Cystic Lesions of the Salivary Gland. Head Neck Pathol. 2018 Dec;12(4):548-561. doi: 10.1007/s12105-018-0904-8. PubMed PMID: 29524082; PMCID: PMC6232202.
Ashman D, Pantanowitz L. Kaposi Sarcoma With Coexisting Intravascular Lymphoma. Int J Surg Pathol. 2019 Feb;27(1):62-63. doi: 10.1177/1066896918762053. PubMed PMID: 29532696.
Cantalupo PG, Pipas JM. Complete Genome Sequence of Pittsburgh Sewage-Associated Virus 1. Genome Announc. 2018 Mar 15;6(11): doi: 10.1128/genomeA.01460-17. PubMed PMID: 29545305; PMCID: PMC5854781.
Shair KHY, Reddy A, Cooper VS. New Insights from Elucidating the Role of LMP1 in Nasopharyngeal Carcinoma. Cancers (Basel). 2018 Mar 21;10(4): doi: 10.3390/cancers10040086. PubMed PMID: 29561768; PMCID: PMC5923341.
Benson CA, Andersen JW, Macatangay BJC, Mailliard RB, Rinaldo CR Jr, Read S, Bozzolo DR, Purdue L, Jennings C, Keefer MC, Glesby M, Tebas P, Russell AF, Martin J, Annunziato P, Popmihajlov Z, Lennox JL. Safety and Immunogenicity of Zoster Vaccine Live in Human Immunodeficiency Virus-Infected Adults With CD4+ Cell Counts >200 Cells/mL Virologically Suppressed on Antiretroviral Therapy. Clin Infect Dis. 2018 Nov 13;67(11):1712-1719. doi: 10.1093/cid/ciy242. PubMed PMID: 29590326; PMCID: PMC6233680.
Clunie D, Hosseinzadeh D, Wintell M, De Mena D, Lajara N, Garcia-Rojo M, Bueno G, Saligrama K, Stearrett A, Toomey D, Abels E, Apeldoorn FV, Langevin S, Nichols S, Schmid J, Horchner U, Beckwith B, Parwani A, Pantanowitz L. Digital Imaging and Communications in Medicine Whole Slide Imaging Connectathon at Digital Pathology Association Pathology Visions 2017. J Pathol Inform. 2018;96. doi: 10.4103/jpi.jpi_1_18. PubMed PMID: 29619278; PMCID: PMC5869966.
Niazi MKK, Tavolara TE, Arole V, Hartman DJ, Pantanowitz L, Gurcan MN. Identifying tumor in pancreatic neuroendocrine neoplasms from Ki67 images using transfer learning. PLoS One. 2018;13(4):e0195621. doi: 10.1371/journal.pone.0195621. PubMed PMID: 29649302; PMCID: PMC5896941.
DeLucia DC, Rinaldo CR, Rappocciolo G. Inefficient HIV-1 trans Infection of CD4+ T Cells by Macrophages from HIV-1 Nonprogressors Is Associated with Altered Membrane Cholesterol and DC-SIGN. J Virol. 2018 Jul 1;92(13): doi: 10.1128/JVI.00092-18. PubMed PMID: 29643243; PMCID: PMC6002718.
Velásquez C, Amako Y, Harold A, Toptan T, Chang Y, Shuda M. Characterization of a Merkel Cell Polyomavirus-Positive Merkel Cell Carcinoma Cell Line CVG-1. Front Microbiol. 2018;9713. doi: 10.3389/fmicb.2018.00713. PubMed PMID: 29696010; PMCID: PMC5905237.
Evans AJ, Bauer TW, Bui MM, Cornish TC, Duncan H, Glassy EF, Hipp J, McGee RS, Murphy D, Myers C, O'Neill DG, Parwani AV, Rampy BA, Salama ME, Pantanowitz L. US Food and Drug Administration Approval of Whole Slide Imaging for Primary Diagnosis: A Key Milestone Is Reached and New Questions Are Raised. Arch Pathol Lab Med. 2018 Nov;142(11):1383-1387. doi: 10.5858/arpa.2017-0496-CP. PubMed PMID: 29708429.
Manzo JL, Cuda J, Pantanowitz L, Xing J, Yu J, Beasley HS, Dhir R, Monaco SE. Clinical trial cytology: Use of on-site evaluation of small biopsy and FNA samples for clinical trials and biomarker research studies. Cancer Cytopathol. 2018 Jul;126(7): doi: 10.1002/cncy.22001. PubMed PMID: 29719135.
Xu CL, Cantalupo PG, Sáenz-Robles MT, Baldwin A, Fitzpatrick D, Norris DE, Jackson E, Pipas JM. Draft Genome Sequence of a Novel Rhabdovirus Isolated from Deinocerites Mosquitoes. Genome Announc. 2018 May 10;6(19): doi: 10.1128/genomeA.01438-17. PubMed PMID: 29748415; PMCID: PMC5946037.
Theodoraki MN, Yerneni S, Sarkar SN, Orr B, Muthuswamy R, Voyten J, Modugno F, Jiang W, Grimm M, Basse PH, Bartlett DL, Edwards RP, Kalinski P. Helicase-Driven Activation of NFκB-COX2 Pathway Mediates the Immunosuppressive Component of dsRNA-Driven Inflammation in the Human Tumor Microenvironment. Cancer Res. 2018 Aug 1;78(15):4292-4302. doi: 10.1158/0008-5472.CAN-17-3985. PubMed PMID: 29853604; PMCID: PMC6636317.
Vendetti FP, Karukonda P, Clump DA, Teo T, Lalonde R, Nugent K, Ballew M, Kiesel BF, Beumer JH, Sarkar SN, Conrads TP, O'Connor MJ, Ferris RL, Tran PT, Delgoffe GM, Bakkenist CJ. ATR kinase inhibitor AZD6738 potentiates CD8+ T cell-dependent antitumor activity following radiation. J Clin Invest. 2018 Aug 31;128(9):3926-3940. doi: 10.1172/JCI96519. PubMed PMID: 29952768; PMCID: PMC6118586.
Wasil LR, Shair KHY. Modified Anoikis Assay That Functionally Segregates Epstein-Barr Virus LMP1 Strains into Two Groups. J Virol. 2018 Sep 15;92(18): doi: 10.1128/JVI.00557-18. PubMed PMID: 29950426; PMCID: PMC6146687.
Rotem A, Serohijos AWR, Chang CB, Wolfe JT, Fischer AE, Mehoke TS, Zhang H, Tao Y, Lloyd Ung W, Choi JM, Rodrigues JV, Kolawole AO, Koehler SA, Wu S, Thielen PM, Cui N, Demirev PA, Giacobbi NS, Julian TR, Schwab K, Lin JS, Smith TJ, Pipas JM, Wobus CE, Feldman AB, Weitz DA, Shakhnovich EI. Evolution on the Biophysical Fitness Landscape of an RNA Virus. Mol Biol Evol. 2018 Oct 1;35(10):2390-2400. doi: 10.1093/molbev/msy131. PubMed PMID: 29955873; PMCID: PMC6188569.
Yan Q, Zhao R, Shen C, Wang F, Li W, Gao SJ, Lu C. Upregulation of MicroRNA 711 Mediates HIV-1 Vpr Promotion of Kaposi's Sarcoma-Associated Herpesvirus Latency and Induction of Pro-proliferation and Pro-survival Cytokines by Targeting the Notch/NF-κB-Signaling Axis. J Virol. 2018 Sep 15;92(18): doi: 10.1128/JVI.00580-18. PubMed PMID: 29976660; PMCID: PMC6146700.
Caves EA, Cook SA, Lee N, Stoltz D, Watkins S, Shair KHY. Air-Liquid Interface Method To Study Epstein-Barr Virus Pathogenesis in Nasopharyngeal Epithelial Cells. mSphere. 2018 Jul 18;3(4): doi: 10.1128/mSphere.00152-18. PubMed PMID: 30021875; PMCID: PMC6052337.
Rimm DL, Leung SCY, McShane LM, Bai Y, Bane AL, Bartlett JMS, Bayani J, Chang MC, Dean M, Denkert C, Enwere EK, Galderisi C, Gholap A, Hugh JC, Jadhav A, Kornaga EN, Laurinavicius A, Levenson R, Lima J, Miller K, Pantanowitz L, Piper T, Ruan J, Srinivasan M, Virk S, Wu Y, Yang H, Hayes DF, Nielsen TO, Dowsett M. An international multicenter study to evaluate reproducibility of automated scoring for assessment of Ki67 in breast cancer. Mod Pathol. 2019 Jan;32(1):59-69. doi: 10.1038/s41379-018-0109-4. PubMed PMID: 30143750.
Toptan T, Abere B, Nalesnik MA, Swerdlow SH, Ranganathan S, Lee N, Shair KH, Moore PS, Chang Y. Circular DNA tumor viruses make circular RNAs. Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):E8737-E8745. doi: 10.1073/pnas.1811728115. PubMed PMID: 30150410; PMCID: PMC6140489.
Rossi ED, Larocca LM, Pantanowitz L. Ancillary molecular testing of indeterminate thyroid nodules. Cancer Cytopathol. 2018 Aug;126 Suppl 8654-671. doi: 10.1002/cncy.22012. PubMed PMID: 30156775.
Banerjee I, Behl B, Mendonca M, Shrivastava G, Russo AJ, Menoret A, Ghosh A, Vella AT, Vanaja SK, Sarkar SN, Fitzgerald KA, Rathinam VAK. Gasdermin D Restrains Type I Interferon Response to Cytosolic DNA by Disrupting Ionic Homeostasis. Immunity. 2018 Sep 18;49(3):413-426.e5. doi: 10.1016/j.immuni.2018.07.006. PubMed PMID: 30170814; PMCID: PMC6347470.
Tan B, Gao SJ. The RNA Epitranscriptome of DNA Viruses. J Virol. 2018 Nov 15;92(22): doi: 10.1128/JVI.00696-18. PubMed PMID: 30185592; PMCID: PMC6206477.
Ramos da Silva S, Cheng F, Huang IC, Jung JU, Gao SJ. Efficiencies and kinetics of infection in different cell types/lines by African and Asian strains of Zika virus. J Med Virol. 2019 Feb;91(2):179-189. doi: 10.1002/jmv.25306. PubMed PMID: 30192399; PMCID: PMC6294704.
Stansfield SE, Mittler JE, Gottlieb GS, Murphy JT, Hamilton DT, Detels R, Wolinsky SM, Jacobson LP, Margolick JB, Rinaldo CR, Herbeck JT, Goodreau SM. Sexual role and HIV-1 set point viral load among men who have sex with men. Epidemics. 2019 Mar;2668-76. doi: 10.1016/j.epidem.2018.08.006. PubMed PMID: 30193771; PMCID: PMC6538391.
Harms PW, Harms KL, Moore PS, DeCaprio JA, Nghiem P, Wong MKK, Brownell I, International Workshop on Merkel Cell Carcinoma Research (IWMCC) Working Group.. The biology and treatment of Merkel cell carcinoma: current understanding and research priorities. Nat Rev Clin Oncol. 2018 Dec;15(12):763-776. doi: 10.1038/s41571-018-0103-2. PubMed PMID: 30287935; PMCID: PMC6319370.
Gregg RW, Sarkar SN, Shoemaker JE. Mathematical modeling of the cGAS pathway reveals robustness of DNA sensing to TREX1 feedback. J Theor Biol. 2019 Feb 7;462148-157. doi: 10.1016/j.jtbi.2018.11.001. PubMed PMID: 30395807.
Gao R, Li T, Tan B, Ramos da Silva S, Jung JU, Feng P, Gao SJ. FoxO1 Suppresses Kaposi's Sarcoma-Associated Herpesvirus Lytic Replication and Controls Viral Latency. J Virol. 2019 Feb 1;93(3): doi: 10.1128/JVI.01681-18. PubMed PMID: 30404794; PMCID: PMC6340022.
Hartman DJ, Ahmad F, Ferris RL, Rimm DL, Pantanowitz L. Utility of CD8 score by automated quantitative image analysis in head and neck squamous cell carcinoma. Oral Oncol. 2018 Nov;86278-287. doi: 10.1016/j.oraloncology.2018.10.005. PubMed PMID: 30409313; PMCID: PMC6260977.
Pantanowitz L, Layfield LJ, Baloch ZW. The growing demand for informatics in cytopathology. Diagn Cytopathol. 2019 Jan; doi: 10.1002/dc.24104. PubMed PMID: 30417577.
Dietz RL, Hartman DJ, Zheng L, Wiley C, Pantanowitz L. Review of the use of telepathology for intraoperative consultation. Expert Rev Med Devices. 2018 Dec;15(12):883-890. doi: 10.1080/17434440.2018.1549987. PubMed PMID: 30451027.
Cima L, Brunelli M, Parwani A, Girolami I, Ciangherotti A, Riva G, Novelli L, Vanzo F, Sorio A, Cirielli V, Barbareschi M, D'Errico A, Scarpa A, Bovo C, Fraggetta F, Pantanowitz L, Eccher A. Validation of Remote Digital Frozen Sections for Cancer and Transplant Intraoperative Services. J Pathol Inform. 2018;934. doi: 10.4103/jpi.jpi_52_18. PubMed PMID: 30450263; PMCID: PMC6187937.
Vargas B, Giacobbi NS, Sanyal A, Venkatachari NJ, Han F, Gupta P, Sluis-Cremer N. Inhibitors of Signaling Pathways That Block Reversal of HIV-1 Latency. Antimicrob Agents Chemother. 2019 Feb;63(2): doi: 10.1128/AAC.01744-18. PubMed PMID: 30455231; PMCID: PMC6355603.
Mosquera-Zamudio A, Hanna MG, Parra-Medina R, Piedrahita AC, Rodriguez-Urrego PA, Pantanowitz L. Advantage of Z-stacking for teleconsultation between the USA and Colombia. Diagn Cytopathol. 2019 Jan;47(1):35-40. doi: 10.1002/dc.23992. PubMed PMID: 30457226.
Li T, Zhu Y, Cheng F, Lu C, Jung JU, Gao SJ. Oncogenic Kaposi's Sarcoma-Associated Herpesvirus Upregulates Argininosuccinate Synthase 1, a Rate-Limiting Enzyme of the Citrulline-Nitric Oxide Cycle, To Activate the STAT3 Pathway and Promote Growth Transformation. J Virol. 2019 Feb 15;93(4): doi: 10.1128/JVI.01599-18. PubMed PMID: 30463977; PMCID: PMC6364034.
Jo VY, Krane JF, Pantanowitz L, Monaco SE. HPV-associated neuroendocrine carcinomas of the head and neck in FNA biopsies: Clinicopathologic features of a rare entity. Cancer Cytopathol. 2019 Feb;127(1):26-34. doi: 10.1002/cncy.22075. PubMed PMID: 30475447.
Grabosch S, Bulatovic M, Zeng F, Ma T, Zhang L, Ross M, Brozick J, Fang Y, Tseng G, Kim E, Gambotto A, Elishaev E, P Edwards R, Vlad AM. Cisplatin-induced immune modulation in ovarian cancer mouse models with distinct inflammation profiles. Oncogene. 2019 Mar;38(13):2380-2393. doi: 10.1038/s41388-018-0581-9. PubMed PMID: 30518877; PMCID: PMC6440870.
Ding X, Jia X, Wang C, Xu J, Gao SJ, Lu C. A DHX9-lncRNA-MDM2 interaction regulates cell invasion and angiogenesis of cervical cancer. Cell Death Differ. 2019 Sep;26(9):1750-1765. doi: 10.1038/s41418-018-0242-0. PubMed PMID: 30518908; PMCID: PMC6748089.
Khatun H, Yamaoka Y, Matsushima Y, Matsunaga S, Kimura H, Ho J, Shuda M, Ryo A. Production and characterization of monoclonal antibodies specific for major capsid VP1 protein of trichodysplasia spinulosa-associated polyomavirus. Microbiol Immunol. 2018 Dec;62(12):763-773. doi: 10.1111/1348-0421.12662. PubMed PMID: 30537287.
Garcia-Bates TM, Palma ML, Shen C, Gambotto A, Macatangay BJC, Ferris RL, Rinaldo CR, Mailliard RB. Contrasting Roles of the PD-1 Signaling Pathway in Dendritic Cell-Mediated Induction and Regulation of HIV-1-Specific Effector T Cell Functions. J Virol. 2019 Mar 1;93(5): doi: 10.1128/JVI.02035-18. PubMed PMID: 30541848; PMCID: PMC6384070.
Toptan T, Brusadelli MG, Turpin B, Witte DP, Surrallés J, Velleuer E, Schramm M, Dietrich R, Brakenhoff RH, Moore PS, Chang Y, Wells SI. Limited detection of human polyomaviruses in Fanconi anemia related squamous cell carcinoma. PLoS One. 2018;13(12):e0209235. doi: 10.1371/journal.pone.0209235. PubMed PMID: 30589865; PMCID: PMC6307729.
Monaco SE, Koah AE, Xing J, Ahmed I, Cuda J, Cunningham J, Metahri D, Progar A, Pantanowitz L. Telecytology implementation: Deployment of telecytology for rapid on-site evaluations at an Academic Medical Center. Diagn Cytopathol. 2019 Mar;47(3):206-213. doi: 10.1002/dc.24077. PubMed PMID: 30588767.
Zhang SY, Zhang SW, Fan XN, Meng J, Chen Y, Gao SJ, Huang Y. Global analysis of N6-methyladenosine functions and its disease association using deep learning and network-based methods. PLoS Comput Biol. 2019 Jan;15(1):e1006663. doi: 10.1371/journal.pcbi.1006663. PubMed PMID: 30601803; PMCID: PMC6331136.
Pantanowitz L, Sharma A, Carter AB, Kurc T, Sussman A, Saltz J. Twenty Years of Digital Pathology: An Overview of the Road Travelled, What is on the Horizon, and the Emergence of Vendor-Neutral Archives. J Pathol Inform. 2018;940. doi: 10.4103/jpi.jpi_69_18. PubMed PMID: 30607307; PMCID: PMC6289005.
Tizhoosh HR, Pantanowitz L. Artificial Intelligence and Digital Pathology: Challenges and Opportunities. J Pathol Inform. 2018;938. doi: 10.4103/jpi.jpi_53_18. PubMed PMID: 30607305; PMCID: PMC6289004.
Liu Y, Pantanowitz L. Digital pathology: Review of current opportunities and challenges for oral pathologists. J Oral Pathol Med. 2019 Apr;48(4):263-269. doi: 10.1111/jop.12825. PubMed PMID: 30618114.
An P, Sáenz Robles MT, Duray AM, Cantalupo PG, Pipas JM. Human polyomavirus BKV infection of endothelial cells results in interferon pathway induction and persistence. PLoS Pathog. 2019 Jan;15(1):e1007505. doi: 10.1371/journal.ppat.1007505. PubMed PMID: 30620752; PMCID: PMC6338385.
Ghosh A, Shao L, Sampath P, Zhao B, Patel NV, Zhu J, Behl B, Parise RA, Beumer JH, O'Sullivan RJ, DeLuca NA, Thorne SH, Rathinam VAK, Li P, Sarkar SN. Oligoadenylate-Synthetase-Family Protein OASL Inhibits Activity of the DNA Sensor cGAS during DNA Virus Infection to Limit Interferon Production. Immunity. 2019 Jan 15;50(1):51-63.e5. doi: 10.1016/j.immuni.2018.12.013. PubMed PMID: 30635239; PMCID: PMC6342484.
Bui MM, Riben MW, Allison KH, Chlipala E, Colasacco C, Kahn AG, Lacchetti C, Madabhushi A, Pantanowitz L, Salama ME, Stewart RL, Thomas NE, Tomaszewski JE, Hammond ME. Quantitative Image Analysis of Human Epidermal Growth Factor Receptor 2 Immunohistochemistry for Breast Cancer: Guideline From the College of American Pathologists. Arch Pathol Lab Med. 2019 Oct;143(10):1180-1195. doi: 10.5858/arpa.2018-0378-CP. PubMed PMID: 30645156; PMCID: PMC6629520.
Fraggetta F, Yagi Y, Garcia-Rojo M, Evans AJ, Tuthill JM, Baidoshvili A, Hartman DJ, Fukuoka J, Pantanowitz L. The Importance of eSlide Macro Images for Primary Diagnosis with Whole Slide Imaging. J Pathol Inform. 2018;946. doi: 10.4103/jpi.jpi_70_18. PubMed PMID: 30662792; PMCID: PMC6319037.
Ding X, Xu J, Wang C, Feng Q, Wang Q, Yang Y, Lu H, Wang F, Zhu K, Li W, Yan Q, Gao SJ, Lu C. Suppression of the SAP18/HDAC1 complex by targeting TRIM56 and Nanog is essential for oncogenic viral FLICE-inhibitory protein-induced acetylation of p65/RelA, NF-κB activation, and promotion of cell invasion and angiogenesis. Cell Death Differ. 2019 Oct;26(10):1970-1986. doi: 10.1038/s41418-018-0268-3. PubMed PMID: 30670829; PMCID: PMC6748093.
Li W, Wang Q, Feng Q, Wang F, Yan Q, Gao SJ, Lu C. Oncogenic KSHV-encoded interferon regulatory factor upregulates HMGB2 and CMPK1 expression to promote cell invasion by disrupting a complex lncRNA-OIP5-AS1/miR-218-5p network. PLoS Pathog. 2019 Jan;15(1):e1007578. doi: 10.1371/journal.ppat.1007578. PubMed PMID: 30699189; PMCID: PMC6370251.
Martínez-Girón R, Pantanowitz L, Martínez-Torre S, Pantanowitz J. Sudden cardiac death due to primary malignant pericardial mesothelioma: Brief report and literature review. Respir Med Case Rep. 2019;26185-188. doi: 10.1016/j.rmcr.2019.01.011. PubMed PMID: 30705816; PMCID: PMC6349302.
Yao S, Hu M, Hao T, Li W, Xue X, Xue M, Zhu X, Zhou F, Qin D, Yan Q, Zhu J, Gao SJ, Lu C. MiRNA-891a-5p mediates HIV-1 Tat and KSHV Orf-K1 synergistic induction of angiogenesis by activating NF-κB signaling. Nucleic Acids Res. 2019 Mar 18;47(5):2700. doi: 10.1093/nar/gkz088. PubMed PMID: 30726947; PMCID: PMC6412127.
Ding X, Jia X, Wang C, Xu J, Gao SJ, Lu C. Correction to: A DHX9-lncRNA-MDM2 interaction regulates cell invasion and angiogenesis of cervical cancer. Cell Death Differ. 2019 Dec;26(12):2807. doi: 10.1038/s41418-019-0273-1. PubMed PMID: 30804472.
Pipas JM. DNA Tumor Viruses and Their Contributions to Molecular Biology. J Virol. 2019 May 1;93(9): doi: 10.1128/JVI.01524-18. PubMed PMID: 30814278; PMCID: PMC6475781.
Kristoff J, Palma ML, Garcia-Bates TM, Shen C, Sluis-Cremer N, Gupta P, Rinaldo CR, Mailliard RB. Type 1-programmed dendritic cells drive antigen-specific latency reversal and immune elimination of persistent HIV-1. EBioMedicine. 2019 May;43295-306. doi: 10.1016/j.ebiom.2019.03.077. PubMed PMID: 30952614; PMCID: PMC6557749.
Rossi ED, Faquin WC, Baloch Z, Fadda G, Thompson L, Larocca LM, Pantanowitz L. Noninvasive Follicular Thyroid Neoplasm with Papillary-Like Nuclear Features (NIFTP): Update and Diagnostic Considerations-a Review. Endocr Pathol. 2019 Jun;30(2):155-162. doi: 10.1007/s12022-019-9574-7. PubMed PMID: 30953289.
Farchoukh L, Pantanowitz L, Xing J, Monaco SE. Azzopardi Phenomenon Associated with Small Cell Carcinoma. Diagn Cytopathol. 2019 Aug;47(8):837-838. doi: 10.1002/dc.24188. PubMed PMID: 30963714.
Butterfield LH, Vujanovic L, Santos PM, Maurer DM, Gambotto A, Lohr J, Li C, Waldman J, Chandran U, Lin Y, Lin H, Tawbi HA, Tarhini AA, Kirkwood JM. Multiple antigen-engineered DC vaccines with or without IFNα to promote antitumor immunity in melanoma. J Immunother Cancer. 2019 Apr 24;7(1):113. doi: 10.1186/s40425-019-0552-x. PubMed PMID: 31014399; PMCID: PMC6480917.
Maleki Z, Baloch Z, Lu R, Shafique K, Song SJ, Viswanathan K, Rao RA, Lefler H, Fatima A, Wiles A, Jo VY, Wang H, Fadda G, Powers CN, Ali SZ, Pantanowitz L, Siddiqui MT, Nayar R, Klijanienko J, Barkan GA, Krane JF, Rossi ED, Callegari F, Kholová I, Bongiovanni M, Faquin WC, Pusztaszeri MP. Application of the Milan System for Reporting Submandibular Gland Cytopathology: An international, multi-institutional study. Cancer Cytopathol. 2019 May;127(5):306-315. doi: 10.1002/cncy.22135. PubMed PMID: 31050186.
Gruffaz M, Yuan H, Meng W, Liu H, Bae S, Kim JS, Lu C, Huang Y, Gao SJ. CRISPR-Cas9 Screening of Kaposi's Sarcoma-Associated Herpesvirus-Transformed Cells Identifies XPO1 as a Vulnerable Target of Cancer Cells. mBio. 2019 May 14;10(3): doi: 10.1128/mBio.00866-19. PubMed PMID: 31088931; PMCID: PMC6520457.
Dell'Aquila M, Gravina C, Cocomazzi A, Capodimonti S, Musarra T, Sfregola S, Fiorentino V, Revelli L, Martini M, Fadda G, Pantanowitz L, Larocca LM, Rossi ED. A large series of hyalinizing trabecular tumors: Cytomorphology and ancillary techniques on fine needle aspiration. Cancer Cytopathol. 2019 May 28; doi: 10.1002/cncy.22139. PubMed PMID: 31135104.
Rossi ED, Faquin WC, Pantanowitz L. Cytologic features of aggressive variants of follicular-derived thyroid carcinoma. Cancer Cytopathol. 2019 Jul;127(7):432-446. doi: 10.1002/cncy.22136. PubMed PMID: 31150164.
Sun R, Cheng E, Velásquez C, Chang Y, Moore PS. Mitosis-related phosphorylation of the eukaryotic translation suppressor 4E-BP1 and its interaction with eukaryotic translation initiation factor 4E (eIF4E). J Biol Chem. 2019 Aug 2;294(31):11840-11852. doi: 10.1074/jbc.RA119.008512. PubMed PMID: 31201269; PMCID: PMC6682726.
Shao L, Hou W, Scharping NE, Vendetti FP, Srivastava R, Roy CN, Menk AV, Wang Y, Chauvin JM, Karukonda P, Thorne SH, Hornung V, Zarour HM, Bakkenist CJ, Delgoffe GM, Sarkar SN. IRF1 Inhibits Antitumor Immunity through the Upregulation of PD-L1 in the Tumor Cell. Cancer Immunol Res. 2019 Aug;7(8):1258-1266. doi: 10.1158/2326-6066.CIR-18-0711. PubMed PMID: 31239318; PMCID: PMC6677597.
Ambinder RF, Wu J, Logan B, Durand CM, Shields R, Popat UR, Little RF, McMahon DK, Cyktor J, Mellors JW, Ayala E, Kaplan LD, Noy A, Jones RJ, Howard A, Forman SJ, Porter D, Arce-Lara C, Shaughnessy P, Sproat L, Hashmi SK, Mendizabal AM, Horowitz MM, Navarro WH, Alvarnas JC. Allogeneic Hematopoietic Cell Transplant for HIV Patients with Hematologic Malignancies: The BMT CTN-0903/AMC-080 Trial. Biol Blood Marrow Transplant. 2019 Nov;25(11):2160-2166. doi: 10.1016/j.bbmt.2019.06.033. PubMed PMID: 31279752; PMCID: PMC6907401.
Macatangay BJC, Jackson EK, Abebe KZ, Comer D, Cyktor J, Klamar-Blain C, Borowski L, Gillespie DG, Mellors JW, Rinaldo CR, Riddler SA. A Randomized, Placebo-Controlled, Pilot Clinical Trial of Dipyridamole to Decrease Hiv-Associated Chronic Inflammation. J Infect Dis. 2019 Jul 6; doi: 10.1093/infdis/jiz344. PubMed PMID: 31282542.
Fan K, Gravemeyer J, Ritter C, Rasheed K, Gambichler T, Moens U, Shuda M, Schrama D, Becker JC. MCPyV Large T Antigen-Induced Atonal Homolog 1 Is a Lineage-Dependency Oncogene in Merkel Cell Carcinoma. J Invest Dermatol. 2020 Jan;140(1):56-65.e3. doi: 10.1016/j.jid.2019.06.135. PubMed PMID: 31283928.
Li T, Ju E, Gao SJ. Kaposi sarcoma-associated herpesvirus miRNAs suppress CASTOR1-mediated mTORC1 inhibition to promote tumorigenesis. J Clin Invest. 2019 Jul 15;129(8):3310-3323. doi: 10.1172/JCI127166. PubMed PMID: 31305263; PMCID: PMC6668677.
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