Publications

Jianhua Xing

Wang W, Taft DA, Chen YJ, Zhang J, Wallace CT, Xu M, Watkins SC, Xing J. Learn to segment single cells with deep distance estimator and deep cell detector. Comput Biol Med. 2019 May;108133-141. doi: 10.1016/j.compbiomed.2019.04.006. PubMed PMID: 31005005.
Singh M, Tian XJ, Donnenberg VS, Watson AM, Zhang J, Stabile LP, Watkins SC, Xing J, Sant S. Targeting the Temporal Dynamics of Hypoxia-Induced Tumor-Secreted Factors Halts Tumor Migration. Cancer Res. 2019 Jun 1;79(11):2962-2977. doi: 10.1158/0008-5472.CAN-18-3151. PubMed PMID: 30952634; PMCID: PMC6548579.
Zhang J, Chen H, Li R, Taft DA, Yao G, Bai F, Xing J. Spatial clustering and common regulatory elements correlate with coordinated gene expression. PLoS Comput Biol. 2019 Mar;15(3):e1006786. doi: 10.1371/journal.pcbi.1006786. PubMed PMID: 30822341; PMCID: PMC6415868.
Xing J, Tian XJ. Investigating epithelial-to-mesenchymal transition with integrated computational and experimental approaches. Phys Biol. 2019 Mar 7;16(3):031001. doi: 10.1088/1478-3975/ab0032. PubMed PMID: 30665206; PMCID: PMC6609444.
Zhang J, Tian XJ, Chen YJ, Wang W, Watkins S, Xing J. Pathway crosstalk enables cells to interpret TGF-β duration. NPJ Syst Biol Appl. 2018;418. doi: 10.1038/s41540-018-0060-5. PubMed PMID: 29872541; PMCID: PMC5972147.
Zhou D, Fu H, Xiao L, Mo H, Zhuo H, Tian X, Lin L, Xing J, Liu Y. Fibroblast-Specific β-Catenin Signaling Dictates the Outcome of AKI. J Am Soc Nephrol. 2018 Apr;29(4):1257-1271. doi: 10.1681/ASN.2017080903. PubMed PMID: 29343518; PMCID: PMC5875957.
Kwon JS, Everetts NJ, Wang X, Wang W, Della Croce K, Xing J, Yao G. Controlling Depth of Cellular Quiescence by an Rb-E2F Network Switch. Cell Rep. 2017 Sep 26;20(13):3223-3235. doi: 10.1016/j.celrep.2017.09.007. PubMed PMID: 28954237; PMCID: PMC6571029.
Tian XJ, Zhang H, Zhang J, Xing J. Reciprocal regulation between mRNA and microRNA enables a bistable switch that directs cell fate decisions. FEBS Lett. 2016 Oct;590(19):3443-3455. doi: 10.1002/1873-3468.12379. PubMed PMID: 27578189.
Zhang J, Tian XJ, Xing J. Signal Transduction Pathways of EMT Induced by TGF-β, SHH, and WNT and Their Crosstalks. J Clin Med. 2016 Mar 28;5(4): doi: 10.3390/jcm5040041. PubMed PMID: 27043642; PMCID: PMC4850464.
Xing J, Lee RE. Putting it all on pigmentation: Heuristics of a bold and stochastic cell fate decision. Sci Signal. 2015 Oct 6;8(397):fs17. doi: 10.1126/scisignal.aad2816. PubMed PMID: 26443702.

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