Member Publications

Moore PS, Chang Y. The conundrum of causality in tumor virology: the cases of KSHV and MCV. Semin Cancer Biol. 2014 Jun;264-12. doi: 10.1016/j.semcancer.2013.11.001. PubMed PMID: 24304907; PMCID: PMC4040341.
D'Aiuto L, Prasad KM, Upton CH, Viggiano L, Milosevic J, Raimondi G, McClain L, Chowdari K, Tischfield J, Sheldon M, Moore JC, Yolken RH, Kinchington PR, Nimgaonkar VL. Persistent infection by HSV-1 is associated with changes in functional architecture of iPSC-derived neurons and brain activation patterns underlying working memory performance. Schizophr Bull. 2015 Jan;41(1):123-32. doi: 10.1093/schbul/sbu032. PubMed PMID: 24622295; PMCID: PMC4266288.
Friedman MR, Stall R, Silvestre AJ, Mustanski B, Shoptaw S, Surkan PJ, Rinaldo CR, Plankey MW. Stuck in the middle: longitudinal HIV-related health disparities among men who have sex with men and women. J Acquir Immune Defic Syndr. 2014 Jun 1;66(2):213-20. doi: 10.1097/QAI.0000000000000143. PubMed PMID: 24662298; PMCID: PMC4030741.
Rinaldo CR, Kunin CM. Monto Ho, in memoriam. Clin Infect Dis. 2014 Jun;58(12):1780-1. doi: 10.1093/cid/ciu193. PubMed PMID: 24668126.
Debiec KT, Gronenborn AM, Chong LT. Evaluating the strength of salt bridges: a comparison of current biomolecular force fields. J Phys Chem B. 2014 Jun 19;118(24):6561-9. doi: 10.1021/jp500958r. PubMed PMID: 24702709; PMCID: PMC4064690.
Bissel SJ, Winkler CC, DelTondo J, Wang G, Williams K, Wiley CA. Coxsackievirus B4 myocarditis and meningoencephalitis in newborn twins. Neuropathology. 2014 Oct;34(5):429-437. doi: 10.1111/neup.12121. PubMed PMID: 24702280; PMCID: PMC4188796.
Harkness JM, Kader M, DeLuca NA. Transcription of the herpes simplex virus 1 genome during productive and quiescent infection of neuronal and nonneuronal cells. J Virol. 2014 Jun;88(12):6847-61. doi: 10.1128/JVI.00516-14. PubMed PMID: 24719411; PMCID: PMC4054390.
Tarafdar S, Poe JA, Smithgall TE. The accessory factor Nef links HIV-1 to Tec/Btk kinases in an Src homology 3 domain-dependent manner. J Biol Chem. 2014 May 30;289(22):15718-28. doi: 10.1074/jbc.M114.572099. PubMed PMID: 24722985; PMCID: PMC4140925.
Markus A, Waldman Ben-Asher H, Kinchington PR, Goldstein RS. Cellular transcriptome analysis reveals differential expression of pro- and antiapoptosis genes by varicella-zoster virus-infected neurons and fibroblasts. J Virol. 2014 Jul;88(13):7674-7. doi: 10.1128/JVI.00500-14. PubMed PMID: 24741086; PMCID: PMC4054417.
Sharaf NG, Poliner E, Slack RL, Christen MT, Byeon IJ, Parniak MA, Gronenborn AM, Ishima R. The p66 immature precursor of HIV-1 reverse transcriptase. Proteins. 2014 Oct;82(10):2343-52. doi: 10.1002/prot.24594. PubMed PMID: 24771554; PMCID: PMC4441793.
Mishra N, Pereira M, Rhodes RH, An P, Pipas JM, Jain K, Kapoor A, Briese T, Faust PL, Lipkin WI. Identification of a novel polyomavirus in a pancreatic transplant recipient with retinal blindness and vasculitic myopathy. J Infect Dis. 2014 Nov 15;210(10):1595-9. doi: 10.1093/infdis/jiu250. PubMed PMID: 24795478; PMCID: PMC4334791.
Forero A, Giacobbi NS, McCormick KD, Gjoerup OV, Bakkenist CJ, Pipas JM, Sarkar SN. Simian virus 40 large T antigen induces IFN-stimulated genes through ATR kinase. J Immunol. 2014 Jun 15;192(12):5933-42. doi: 10.4049/jimmunol.1303470. PubMed PMID: 24799566; PMCID: PMC4078001.
Chang PY, Detels R, Martínez-Maza O, Zhang ZF, Jacobson LP, Margolick JB, Variakojis D, Rinaldo CR Jr, Hussain SK. Comment on "characteristics of B-cell lymphomas in HIV/HCV-coinfected patients during the combined antiretroviral therapy era: an ANRS CO16 LYMPHOVIR cohort study". J Acquir Immune Defic Syndr. 2014 Oct 1;67(2):e84-6. doi: 10.1097/QAI.0000000000000204. PubMed PMID: 24820108; PMCID: PMC4162807.
Zimmerman RK, Rinaldo CR, Nowalk MP, Gk B, Thompson MG, Moehling KK, Bullotta A, Wisniewski S. Influenza and other respiratory virus infections in outpatients with medically attended acute respiratory infection during the 2011-12 influenza season. Influenza Other Respir Viruses. 2014 Jul;8(4):397-405. doi: 10.1111/irv.12247. PubMed PMID: 24852890; PMCID: PMC4057994.
Stevenson HP, Makhov AM, Calero M, Edwards AL, Zeldin OB, Mathews II, Lin G, Barnes CO, Santamaria H, Ross TM, Soltis SM, Khosla C, Nagarajan V, Conway JF, Cohen AE, Calero G. Use of transmission electron microscopy to identify nanocrystals of challenging protein targets. Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8470-5. doi: 10.1073/pnas.1400240111. PubMed PMID: 24872454; PMCID: PMC4060711.
Stevenson HP, DePonte DP, Makhov AM, Conway JF, Zeldin OB, Boutet S, Calero G, Cohen AE. Transmission electron microscopy as a tool for nanocrystal characterization pre- and post-injector. Philos Trans R Soc Lond B Biol Sci. 2014 Jul 17;369(1647):20130322. doi: 10.1098/rstb.2013.0322. PubMed PMID: 24914151; PMCID: PMC4052860.
Nolen BM, Breen EC, Bream JH, Jenkins FJ, Kingsley LA, Rinaldo CR, Lokshin AE. Circulating mediators of inflammation and immune activation in AIDS-related non-hodgkin lymphoma. PLoS One. 2014;9(6):e99144. doi: 10.1371/journal.pone.0099144. PubMed PMID: 24922518; PMCID: PMC4055650.
Zhu J, Zhang Y, Ghosh A, Cuevas RA, Forero A, Dhar J, Ibsen MS, Schmid-Burgk JL, Schmidt T, Ganapathiraju MK, Fujita T, Hartmann R, Barik S, Hornung V, Coyne CB, Sarkar SN. Antiviral activity of human OASL protein is mediated by enhancing signaling of the RIG-I RNA sensor. Immunity. 2014 Jun 19;40(6):936-48. doi: 10.1016/j.immuni.2014.05.007. PubMed PMID: 24931123; PMCID: PMC4101812.
Smith KN, Mailliard RB, Larsen BB, Wong K, Gupta P, Mullins JI, Rinaldo CR. Dendritic cells restore CD8+ T cell reactivity to autologous HIV-1. J Virol. 2014 Sep 1;88(17):9976-90. doi: 10.1128/JVI.01275-14. PubMed PMID: 24942586; PMCID: PMC4136313.
Yu X, Bian X, Throop A, Song L, Moral LD, Park J, Seiler C, Fiacco M, Steel J, Hunter P, Saul J, Wang J, Qiu J, Pipas JM, LaBaer J. Exploration of panviral proteome: high-throughput cloning and functional implications in virus-host interactions. Theranostics. 2014;4(8):808-22. doi: 10.7150/thno.8255. PubMed PMID: 24955142; PMCID: PMC4063979.
Férir G, Huskens D, Noppen S, Koharudin LM, Gronenborn AM, Schols D. Broad anti-HIV activity of the Oscillatoria agardhii agglutinin homologue lectin family. J Antimicrob Chemother. 2014 Oct;69(10):2746-58. doi: 10.1093/jac/dku220. PubMed PMID: 24970741; PMCID: PMC4164143.
Sáenz Robles MT, Chong JL, Koivisto C, Trimboli A, Liu H, Leone G, Pipas JM. Viral oncogene expression in the stem/progenitor cell compartment of the mouse intestine induces adenomatous polyps. Mol Cancer Res. 2014 Oct;12(10):1355-64. doi: 10.1158/1541-7786.MCR-14-0166. PubMed PMID: 24994749; PMCID: PMC4201981.
Koharudin LM, Gronenborn AM. Antiviral lectins as potential HIV microbicides. Curr Opin Virol. 2014 Aug;795-100. doi: 10.1016/j.coviro.2014.05.006. PubMed PMID: 25010042; PMCID: PMC4149946.
Hensler HR, Tomaszewski MJ, Rappocciolo G, Rinaldo CR, Jenkins FJ. Human herpesvirus 8 glycoprotein B binds the entry receptor DC-SIGN. Virus Res. 2014 Sep 22;19097-103. doi: 10.1016/j.virusres.2014.07.003. PubMed PMID: 25018023; PMCID: PMC4142096.
Shridhar V, Chen Y, Gupta P. The CD8 antiviral factor (CAF) can suppress HIV-1 transcription from the long terminal repeat (LTR) promoter in the absence of elements upstream of the CATATAA box. Virol J. 2014 Jul 21;11130. doi: 10.1186/1743-422X-11-130. PubMed PMID: 25048949; PMCID: PMC4223764.
Sae-Ueng U, Liu T, Catalano CE, Huffman JB, Homa FL, Evilevitch A. Major capsid reinforcement by a minor protein in herpesviruses and phage. Nucleic Acids Res. 2014 Aug;42(14):9096-107. doi: 10.1093/nar/gku634. PubMed PMID: 25053840; PMCID: PMC4132744.
Bayer A, Delorme-Axford E, Sleigher C, Frey TK, Trobaugh DW, Klimstra WB, Emert-Sedlak LA, Smithgall TE, Kinchington PR, Vadia S, Seveau S, Boyle JP, Coyne CB, Sadovsky Y. Human trophoblasts confer resistance to viruses implicated in perinatal infection. Am J Obstet Gynecol. 2015 Jan;212(1):71.e1-71.e8. doi: 10.1016/j.ajog.2014.07.060. PubMed PMID: 25108145; PMCID: PMC4275367.
Xue M, Yao S, Hu M, Li W, Hao T, Zhou F, Zhu X, Lu H, Qin D, Yan Q, Zhu J, Gao SJ, Lu C. HIV-1 Nef and KSHV oncogene K1 synergistically promote angiogenesis by inducing cellular miR-718 to regulate the PTEN/AKT/mTOR signaling pathway. Nucleic Acids Res. 2014 Sep;42(15):9862-79. doi: 10.1093/nar/gku583. PubMed PMID: 25104021; PMCID: PMC4150761.
Alvarado JJ, Tarafdar S, Yeh JI, Smithgall TE. Interaction with the Src homology (SH3-SH2) region of the Src-family kinase Hck structures the HIV-1 Nef dimer for kinase activation and effector recruitment. J Biol Chem. 2014 Oct 10;289(41):28539-53. doi: 10.1074/jbc.M114.600031. PubMed PMID: 25122770; PMCID: PMC4192505.
Seneca NTM, Sáenz Robles MT, Pipas JM. Removal of a small C-terminal region of JCV and SV40 large T antigens has differential effects on transformation. Virology. 2014 Nov;468-47047-56. doi: 10.1016/j.virol.2014.07.038. PubMed PMID: 25129438; PMCID: PMC4253650.
Moroco JA, Craigo JK, Iacob RE, Wales TE, Engen JR, Smithgall TE. Differential sensitivity of Src-family kinases to activation by SH3 domain displacement. PLoS One. 2014;9(8):e105629. doi: 10.1371/journal.pone.0105629. PubMed PMID: 25144189; PMCID: PMC4140816.
Harris KG, Coyne CB. Death waits for no man--does it wait for a virus? How enteroviruses induce and control cell death. Cytokine Growth Factor Rev. 2014 Oct;25(5):587-96. doi: 10.1016/j.cytogfr.2014.08.002. PubMed PMID: 25172372; PMCID: PMC4371850.
Knowlton ER, Rappocciolo G, Piazza P, Lepone LM, Nadgir SV, Bullotta A, Berendam SJ, Li J, Reinhart TA, Jenkins FJ, Rinaldo CR. Human herpesvirus 8 induces polyfunctional B lymphocytes that drive Kaposi's sarcoma. MBio. 2014 Sep 2;5(5):e01277-14. doi: 10.1128/mBio.01277-14. PubMed PMID: 25182322; PMCID: PMC4173773.
Kim E, Okada K, Kenniston T, Raj VS, AlHajri MM, Farag EA, AlHajri F, Osterhaus AD, Haagmans BL, Gambotto A. Immunogenicity of an adenoviral-based Middle East Respiratory Syndrome coronavirus vaccine in BALB/c mice. Vaccine. 2014 Oct 14;32(45):5975-82. doi: 10.1016/j.vaccine.2014.08.058. PubMed PMID: 25192975.
Mazzacurati L, Marzulli M, Reinhart B, Miyagawa Y, Uchida H, Goins WF, Li A, Kaur B, Caligiuri M, Cripe T, Chiocca EA, Amankulor N, Cohen JB, Glorioso JC, Grandi P. Use of miRNA response sequences to block off-target replication and increase the safety of an unattenuated, glioblastoma-targeted oncolytic HSV. Mol Ther. 2015 Jan;23(1):99-107. doi: 10.1038/mt.2014.177. PubMed PMID: 25200130; PMCID: PMC4426800.
Sae-Ueng U, Li D, Zuo X, Huffman JB, Homa FL, Rau D, Evilevitch A. Solid-to-fluid DNA transition inside HSV-1 capsid close to the temperature of infection. Nat Chem Biol. 2014 Oct;10(10):861-7. doi: 10.1038/nchembio.1628. PubMed PMID: 25195012; PMCID: PMC6528806.
Campbell DM, Rappocciolo G, Jenkins FJ, Rinaldo CR. Dendritic cells: key players in human herpesvirus 8 infection and pathogenesis. Front Microbiol. 2014;5452. doi: 10.3389/fmicb.2014.00452. PubMed PMID: 25221546; PMCID: PMC4148009.
Fraietta JA, Mueller YM, Lozenski KL, Ratner D, Boesteanu AC, Hancock AS, Lackman-Smith C, Zentner IJ, Chaiken IM, Chung S, LeGrice SF, Snyder BA, Mankowski MK, Jones NM, Hope JL, Gupta P, Anderson SH, Wigdahl B, Katsikis PD. Abasic phosphorothioate oligomers inhibit HIV-1 reverse transcription and block virus transmission across polarized ectocervical organ cultures. Antimicrob Agents Chemother. 2014 Dec;58(12):7056-71. doi: 10.1128/AAC.02991-14. PubMed PMID: 25224013; PMCID: PMC4249537.
Ho J, Jedrych JJ, Feng H, Natalie AA, Grandinetti L, Mirvish E, Crespo MM, Yadav D, Fasanella KE, Proksell S, Kuan SF, Pastrana DV, Buck CB, Shuda Y, Moore PS, Chang Y. Human polyomavirus 7-associated pruritic rash and viremia in transplant recipients. J Infect Dis. 2015 May 15;211(10):1560-5. doi: 10.1093/infdis/jiu524. PubMed PMID: 25231015; PMCID: PMC4425822.
Zhang L, Franks J, Stolz DB, Conway JF, Thibodeau PH. Inducible polymerization and two-dimensional assembly of the repeats-in-toxin (RTX) domain from the Pseudomonas aeruginosa alkaline protease. Biochemistry. 2014 Oct 21;53(41):6452-62. doi: 10.1021/bi5007546. PubMed PMID: 25232897; PMCID: PMC4204888.
Kwun HJ, Toptan T, Ramos da Silva S, Atkins JF, Moore PS, Chang Y. Human DNA tumor viruses generate alternative reading frame proteins through repeat sequence recoding. Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):E4342-9. doi: 10.1073/pnas.1416122111. PubMed PMID: 25271323; PMCID: PMC4205619.
Zhou J, Qu Z, Yan S, Sun F, Whitsett JA, Shapiro SD, Xiao G. Differential roles of STAT3 in the initiation and growth of lung cancer. Oncogene. 2015 Jul;34(29):3804-3814. doi: 10.1038/onc.2014.318. PubMed PMID: 25284582; PMCID: PMC4387125.
Koharudin LM, Wu Y, DeLucia M, Mehrens J, Gronenborn AM, Ahn J. Structural basis of allosteric activation of sterile α motif and histidine-aspartate domain-containing protein 1 (SAMHD1) by nucleoside triphosphates. J Biol Chem. 2014 Nov 21;289(47):32617-27. doi: 10.1074/jbc.M114.591958. PubMed PMID: 25288794; PMCID: PMC4239615.
Zhang X, Simerly C, Hartnett C, Schatten G, Smithgall TE. Src-family tyrosine kinase activities are essential for differentiation of human embryonic stem cells. Stem Cell Res. 2014 Nov;13(3 Pt A):379-89. doi: 10.1016/j.scr.2014.09.007. PubMed PMID: 25305536; PMCID: PMC4252886.
Albright BS, Kosinski A, Szczepaniak R, Cook EA, Stow ND, Conway JF, Weller SK. The putative herpes simplex virus 1 chaperone protein UL32 modulates disulfide bond formation during infection. J Virol. 2015 Jan;89(1):443-53. doi: 10.1128/JVI.01913-14. PubMed PMID: 25320327; PMCID: PMC4301124.
Katz JP, Pipas JM. SummonChimera infers integrated viral genomes with nucleotide precision from NGS data. BMC Bioinformatics. 2014 Oct 22;15348. doi: 10.1186/s12859-014-0348-4. PubMed PMID: 25331652; PMCID: PMC4210586.
Zaccard CR, Watkins SC, Ayyavoo V, Rinaldo CR, Mailliard RB. HIV's ticket to ride: Cytotoxic T-lymphocyte-activated dendritic cells exploited for virus intercellular transfer. AIDS Res Hum Retroviruses. 2014 Nov;30(11):1023-4. doi: 10.1089/aid.2014.0218. PubMed PMID: 25354022; PMCID: PMC4208601.
Delorme-Axford E, Sadovsky Y, Coyne CB. The Placenta as a Barrier to Viral Infections. Annu Rev Virol. 2014 Nov;1(1):133-46. doi: 10.1146/annurev-virology-031413-085524. PubMed PMID: 26958718.
Moroco JA, Baumgartner MP, Rust HL, Choi HG, Hur W, Gray NS, Camacho CJ, Smithgall TE. A Discovery Strategy for Selective Inhibitors of c-Src in Complex with the Focal Adhesion Kinase SH3/SH2-binding Region. Chem Biol Drug Des. 2015 Aug;86(2):144-55. doi: 10.1111/cbdd.12473. PubMed PMID: 25376742; PMCID: PMC4444405.
Wiley CA, Bonneh-Barkay D, Dixon CE, Lesniak A, Wang G, Bissel SJ, Kochanek PM. Role for mammalian chitinase 3-like protein 1 in traumatic brain injury. Neuropathology. 2015 Apr;35(2):95-106. doi: 10.1111/neup.12158. PubMed PMID: 25377763.
Chang Y, Moore P. Twenty years of KSHV. Viruses. 2014 Nov 7;6(11):4258-64. doi: 10.3390/v6114258. PubMed PMID: 25386844; PMCID: PMC4246220.
Macatangay BJ, Rinaldo CR. Preserving HIV-specific T cell responses: does timing of antiretroviral therapy help? Curr Opin HIV AIDS. 2015 Jan;10(1):55-60. doi: 10.1097/COH.0000000000000124. PubMed PMID: 25389805; PMCID: PMC4610392.
Cardone G, Duda RL, Cheng N, You L, Conway JF, Hendrix RW, Steven AC. Metastable intermediates as stepping stones on the maturation pathways of viral capsids. MBio. 2014 Nov 11;5(6):e02067. doi: 10.1128/mBio.02067-14. PubMed PMID: 25389177; PMCID: PMC4235213.
Lee H, Brendle SA, Bywaters SM, Guan J, Ashley RE, Yoder JD, Makhov AM, Conway JF, Christensen ND, Hafenstein S. A cryo-electron microscopy study identifies the complete H16.V5 epitope and reveals global conformational changes initiated by binding of the neutralizing antibody fragment. J Virol. 2015 Jan 15;89(2):1428-38. doi: 10.1128/JVI.02898-14. PubMed PMID: 25392224; PMCID: PMC4300654.
Hritz J, Byeon IJ, Krzysiak T, Martinez A, Sklenar V, Gronenborn AM. Dissection of binding between a phosphorylated tyrosine hydroxylase peptide and 14-3-3zeta: A complex story elucidated by NMR. Biophys J. 2014 Nov 4;107(9):2185-94. doi: 10.1016/j.bpj.2014.08.039. PubMed PMID: 25418103; PMCID: PMC4223184.
Shingler KL, Cifuente JO, Ashley RE, Makhov AM, Conway JF, Hafenstein S. The enterovirus 71 procapsid binds neutralizing antibodies and rescues virus infection in vitro. J Virol. 2015 Feb;89(3):1900-8. doi: 10.1128/JVI.03098-14. PubMed PMID: 25428877; PMCID: PMC4300772.
Wang J, Li J, Santana-Santos L, Shuda M, Sobol RW, Van Houten B, Qian W. A novel strategy for targeted killing of tumor cells: Induction of multipolar acentrosomal mitotic spindles with a quinazolinone derivative mdivi-1. Mol Oncol. 2015 Feb;9(2):488-502. doi: 10.1016/j.molonc.2014.10.002. PubMed PMID: 25458053; PMCID: PMC4305024.
Ireland AW, Gobillot TA, Gupta T, Seguin SP, Liang M, Resnick L, Goldberg MT, Manos-Turvey A, Pipas JM, Wipf P, Brodsky JL. Synthesis and structure–activity relationships of small molecule inhibitors of the simian virus 40 T antigen oncoprotein, an anti-polyomaviral target. Bioorg Med Chem. 2014 Nov 15;22(22):6490-6502. doi: 10.1016/j.bmc.2014.09.019. PubMed PMID: 25440730; PMCID: PMC4293281.
Delorme-Axford E, Morosky S, Bomberger J, Stolz DB, Jackson WT, Coyne CB. BPIFB3 regulates autophagy and coxsackievirus B replication through a noncanonical pathway independent of the core initiation machinery. MBio. 2014 Dec 9;5(6):e02147. doi: 10.1128/mBio.02147-14. PubMed PMID: 25491355; PMCID: PMC4324245.
Zaccard CR, Watkins SC, Kalinski P, Fecek RJ, Yates AL, Salter RD, Ayyavoo V, Rinaldo CR, Mailliard RB. CD40L induces functional tunneling nanotube networks exclusively in dendritic cells programmed by mediators of type 1 immunity. J Immunol. 2015 Feb 1;194(3):1047-56. doi: 10.4049/jimmunol.1401832. PubMed PMID: 25548234; PMCID: PMC4297732.
Leddon JL, Chen CY, Currier MA, Wang PY, Jung FA, Denton NL, Cripe KM, Haworth KB, Arnold MA, Gross AC, Eubank TD, Goins WF, Glorioso JC, Cohen JB, Grandi P, Hildeman DA, Cripe TP. Oncolytic HSV virotherapy in murine sarcomas differentially triggers an antitumor T-cell response in the absence of virus permissivity. Mol Ther Oncolytics. 2015;114010. doi: 10.1038/mto.2014.10. PubMed PMID: 27119100; PMCID: PMC4782947.
Phair J, Detels R, Margolick J, Rinaldo C, Jacobson L, Martínez-Maza O, Wolinsky S, Muñoz A. Memories of John Fahey and His Contributions to the Multicenter AIDS Cohort Study (MACS). For Immunopathol Dis Therap. 2015;6(1-2):53-55. doi: 10.1615/ForumImmunDisTher.v6.i1-2.110. PubMed PMID: 28706749; PMCID: PMC5505340.
Smith KN, Mailliard RB, Rinaldo CR. Programming T cell Killers for an HIV Cure: Teach the New Dogs New Tricks and Let the Sleeping Dogs Lie. For Immunopathol Dis Therap. 2015;6(1-2):67-77. doi: 10.1615/ForumImmunDisTher.2016014160. PubMed PMID: 28344852; PMCID: PMC5363401.
Zimmerman RK, Rinaldo CR, Nowalk MP, Balasubramani GK, Thompson MG, Bullotta A, Susick M, Wisniewski S. Detection of influenza virus infection using two PCR methods. Adv Virol. 2014;2014274679. doi: 10.1155/2014/274679. PubMed PMID: 25574169; PMCID: PMC4276355.
Giacobbi NS, Gupta T, Coxon AT, Pipas JM. Polyomavirus T antigens activate an antiviral state. Virology. 2015 Feb;476377-385. doi: 10.1016/j.virol.2014.12.032. PubMed PMID: 25589241; PMCID: PMC4323618.
Kwun HJ, Shuda M, Camacho CJ, Gamper AM, Thant M, Chang Y, Moore PS. Restricted protein phosphatase 2A targeting by Merkel cell polyomavirus small T antigen. J Virol. 2015 Apr;89(8):4191-200. doi: 10.1128/JVI.00157-15. PubMed PMID: 25631078; PMCID: PMC4442354.
Cantalupo PG, Katz JP, Pipas JM. HeLa nucleic acid contamination in the cancer genome atlas leads to the misidentification of human papillomavirus 18. J Virol. 2015 Apr;89(8):4051-7. doi: 10.1128/JVI.03365-14. PubMed PMID: 25631090; PMCID: PMC4442357.
Wendzicki JA, Moore PS, Chang Y. Large T and small T antigens of Merkel cell polyomavirus. Curr Opin Virol. 2015 Apr;1138-43. doi: 10.1016/j.coviro.2015.01.009. PubMed PMID: 25681708; PMCID: PMC4456251.
Carneiro MG, Koharudin LM, Griesinger C, Gronenborn AM, Lee D. (1)H, (13)C and (15)N resonance assignment of the anti-HIV lectin from Oscillatoria agardhii. Biomol NMR Assign. 2015 Oct;9(2):317-9. doi: 10.1007/s12104-015-9600-8. PubMed PMID: 25680849; PMCID: PMC4537409.
Badejo OA, Chang CC, So-Armah KA, Tracy RP, Baker JV, Rimland D, Butt AA, Gordon AJ, Rinaldo CR Jr, Kraemer K, Samet JH, Tindle HA, Goetz MB, Rodriguez-Barradas MC, Bedimo R, Gibert CL, Leaf DA, Kuller LH, Deeks SG, Justice AC, Freiberg MS. CD8+ T-cells count in acute myocardial infarction in HIV disease in a predominantly male cohort. Biomed Res Int. 2015;2015246870. doi: 10.1155/2015/246870. PubMed PMID: 25688354; PMCID: PMC4320893.
Gupta T, Sáenz Robles MT, Pipas JM. Cellular transformation of mouse embryo fibroblasts in the absence of activator E2Fs. J Virol. 2015 May;89(9):5124-33. doi: 10.1128/JVI.03578-14. PubMed PMID: 25717106; PMCID: PMC4403490.
Tandon R, Mocarski ES, Conway JF. The A, B, Cs of herpesvirus capsids. Viruses. 2015 Feb 26;7(3):899-914. doi: 10.3390/v7030899. PubMed PMID: 25730559; PMCID: PMC4379554.
Qu Z, Xiao G. Systematic detection of noncanonical NF-κB activation. Methods Mol Biol. 2015;1280121-54. doi: 10.1007/978-1-4939-2422-6_8. PubMed PMID: 25736747.
Herbeck J, Ghorai S, Chen L, Rinaldo CR, Margolick JB, Detels R, Jacobson L, Wolinsky S, Mullins JI. p21(WAF1/CIP1) RNA expression in highly HIV-1 exposed, uninfected individuals. PLoS One. 2015;10(3):e0119218. doi: 10.1371/journal.pone.0119218. PubMed PMID: 25746435; PMCID: PMC4352077.
Lachmann J, Glaubke E, Moore PS, Ungermann C. The Vps39-like TRAP1 is an effector of Rab5 and likely the missing Vps3 subunit of human CORVET. Cell Logist. 2014 Oct-Dec;4(4):e970840. doi: 10.4161/21592780.2014.970840. PubMed PMID: 25750764; PMCID: PMC4325178.
An P, Brodsky JL, Pipas JM. The conserved core enzymatic activities and the distinct dynamics of polyomavirus large T antigens. Arch Biochem Biophys. 2015 May 1;57323-31. doi: 10.1016/j.abb.2015.02.033. PubMed PMID: 25752954; PMCID: PMC4865250.
Abraham AG, Darilay A, McKay H, Margolick JB, Estrella MM, Palella FJ Jr, Bolan R, Rinaldo CR, Jacobson LP. Kidney Dysfunction and Markers of Inflammation in the Multicenter AIDS Cohort Study. J Infect Dis. 2015 Oct 1;212(7):1100-10. doi: 10.1093/infdis/jiv159. PubMed PMID: 25762788; PMCID: PMC4559190.
Miyagawa Y, Marino P, Verlengia G, Uchida H, Goins WF, Yokota S, Geller DA, Yoshida O, Mester J, Cohen JB, Glorioso JC. Herpes simplex viral-vector design for efficient transduction of nonneuronal cells without cytotoxicity. Proc Natl Acad Sci U S A. 2015 Mar 31;112(13):E1632-41. doi: 10.1073/pnas.1423556112. PubMed PMID: 25775541; PMCID: PMC4386379.
Lennemann NJ, Coyne CB. Catch me if you can: the link between autophagy and viruses. PLoS Pathog. 2015 Mar;11(3):e1004685. doi: 10.1371/journal.ppat.1004685. PubMed PMID: 25811485; PMCID: PMC4374752.
Kim E, Okada K, Beeler JA, Crim RL, Steitz J, Piedra PA, Gilbert BE, Gambotto A. Correction for Kim et al., development of an adenovirus-based respiratory syncytial virus vaccine: preclinical evaluation of efficacy, immunogenicity, and enhanced disease in a cotton rat model. J Virol. 2015 May;89(9):5193. doi: 10.1128/JVI.03669-14. PubMed PMID: 25841050; PMCID: PMC4403469.
Rosenthal AK, Gohr CM, Mitton-Fitzgerald E, Grewal R, Ninomiya J, Coyne CB, Jackson WT. Autophagy modulates articular cartilage vesicle formation in primary articular chondrocytes. J Biol Chem. 2015 May 22;290(21):13028-38. doi: 10.1074/jbc.M114.630558. PubMed PMID: 25869133; PMCID: PMC4505557.
Carneiro MG, Koharudin LM, Ban D, Sabo TM, Trigo-Mourino P, Mazur A, Griesinger C, Gronenborn AM, Lee D. Sampling of Glycan-Bound Conformers by the Anti-HIV Lectin Oscillatoria agardhii agglutinin in the Absence of Sugar. Angew Chem Int Ed Engl. 2015 May 26;54(22):6462-5. doi: 10.1002/anie.201500213. PubMed PMID: 25873445; PMCID: PMC4480366.
Sadovsky Y, Mouillet JF, Ouyang Y, Bayer A, Coyne CB. The Function of TrophomiRs and Other MicroRNAs in the Human Placenta. Cold Spring Harb Perspect Med. 2015 Apr 15;5(8):a023036. doi: 10.1101/cshperspect.a023036. PubMed PMID: 25877393; PMCID: PMC4526727.
Guedon JM, Yee MB, Zhang M, Harvey SA, Goins WF, Kinchington PR. Neuronal changes induced by Varicella Zoster Virus in a rat model of postherpetic neuralgia. Virology. 2015 Aug;482167-80. doi: 10.1016/j.virol.2015.03.046. PubMed PMID: 25880108; PMCID: PMC4461525.
Shuda M, Velásquez C, Cheng E, Cordek DG, Kwun HJ, Chang Y, Moore PS. CDK1 substitutes for mTOR kinase to activate mitotic cap-dependent protein translation. Proc Natl Acad Sci U S A. 2015 May 12;112(19):5875-82. doi: 10.1073/pnas.1505787112. PubMed PMID: 25883264; PMCID: PMC4434708.
Zimmerman RK, Rinaldo CR, Nowalk MP, Balasubramani GK, Moehling KK, Bullotta A, Eng HF, Raviotta JM, Sax TM, Wisniewski S. Viral infections in outpatients with medically attended acute respiratory illness during the 2012-2013 influenza season. BMC Infect Dis. 2015 Feb 22;1587. doi: 10.1186/s12879-015-0806-2. PubMed PMID: 25887948; PMCID: PMC4344779.
Pope WH, Bowman CA, Russell DA, Jacobs-Sera D, Asai DJ, Cresawn SG, Jacobs WR, Hendrix RW, Lawrence JG, Hatfull GF, Science Education Alliance Phage Hunters Advancing Genomics and Evolutionary Science., Phage Hunters Integrating Research and Education., Mycobacterial Genetics Course.. Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity. Elife. 2015 Apr 28;4e06416. doi: 10.7554/eLife.06416. PubMed PMID: 25919952; PMCID: PMC4408529.
Sattar S, Bennett NJ, Wen WX, Guthrie JM, Blackwell LF, Conway JF, Rakonjac J. Ff-nano, short functionalized nanorods derived from Ff (f1, fd, or M13) filamentous bacteriophage. Front Microbiol. 2015;6316. doi: 10.3389/fmicb.2015.00316. PubMed PMID: 25941520; PMCID: PMC4403547.
Guedon JM, Wu S, Zheng X, Churchill CC, Glorioso JC, Liu CH, Liu S, Vulchanova L, Bekker A, Tao YX, Kinchington PR, Goins WF, Fairbanks CA, Hao S. Current gene therapy using viral vectors for chronic pain. Mol Pain. 2015 May 13;1127. doi: 10.1186/s12990-015-0018-1. PubMed PMID: 25962909; PMCID: PMC4446851.
Grigoryan S, Yee MB, Glick Y, Gerber D, Kepten E, Garini Y, Yang IH, Kinchington PR, Goldstein RS. Direct transfer of viral and cellular proteins from varicella-zoster virus-infected non-neuronal cells to human axons. PLoS One. 2015;10(5):e0126081. doi: 10.1371/journal.pone.0126081. PubMed PMID: 25973990; PMCID: PMC4431828.
Zhang H, Cockrell SK, Kolawole AO, Rotem A, Serohijos AW, Chang CB, Tao Y, Mehoke TS, Han Y, Lin JS, Giacobbi NS, Feldman AB, Shakhnovich E, Weitz DA, Wobus CE, Pipas JM. Isolation and Analysis of Rare Norovirus Recombinants from Coinfected Mice Using Drop-Based Microfluidics. J Virol. 2015 Aug;89(15):7722-34. doi: 10.1128/JVI.01137-15. PubMed PMID: 25972549; PMCID: PMC4505660.
Wasil LR, Wei L, Chang C, Lan L, Shair KH. Regulation of DNA Damage Signaling and Cell Death Responses by Epstein-Barr Virus Latent Membrane Protein 1 (LMP1) and LMP2A in Nasopharyngeal Carcinoma Cells. J Virol. 2015 Aug;89(15):7612-24. doi: 10.1128/JVI.00958-15. PubMed PMID: 25972552; PMCID: PMC4505682.
Mardekian SK, Fortuna D, Nix A, Bhatti T, Wiley CA, Flanders A, Urtecho J, Sloane J, Ahmad J, Curtis MT. Severe human parechovirus type 3 myocarditis and encephalitis in an adolescent with hypogammaglobulinemia. Int J Infect Dis. 2015 Jul;366-8. doi: 10.1016/j.ijid.2015.05.008. PubMed PMID: 25975649.
Guan J, Bywaters SM, Brendle SA, Lee H, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S. Structural comparison of four different antibodies interacting with human papillomavirus 16 and mechanisms of neutralization. Virology. 2015 Sep;483253-63. doi: 10.1016/j.virol.2015.04.016. PubMed PMID: 25996608; PMCID: PMC4516578.
Dembowski JA, DeLuca NA. Selective recruitment of nuclear factors to productively replicating herpes simplex virus genomes. PLoS Pathog. 2015 May;11(5):e1004939. doi: 10.1371/journal.ppat.1004939. PubMed PMID: 26018390; PMCID: PMC4446364.
Markus A, Lebenthal-Loinger I, Yang IH, Kinchington PR, Goldstein RS. An in vitro model of latency and reactivation of varicella zoster virus in human stem cell-derived neurons. PLoS Pathog. 2015 Jun;11(6):e1004885. doi: 10.1371/journal.ppat.1004885. PubMed PMID: 26042814; PMCID: PMC4456082.
Wu Y, Koharudin LM, Mehrens J, DeLucia M, Byeon CH, Byeon IJ, Calero G, Ahn J, Gronenborn AM. Structural Basis of Clade-specific Engagement of SAMHD1 (Sterile α Motif and Histidine/Aspartate-containing Protein 1) Restriction Factors by Lentiviral Viral Protein X (Vpx) Virulence Factors. J Biol Chem. 2015 Jul 17;290(29):17935-45. doi: 10.1074/jbc.M115.665513. PubMed PMID: 26045556; PMCID: PMC4505041.
McClain L, Zhi Y, Cheng H, Ghosh A, Piazza P, Yee MB, Kumar S, Milosevic J, Bloom DC, Arav-Boger R, Kinchington PR, Yolken R, Nimgaonkar V, D'Aiuto L. Broad-spectrum non-nucleoside inhibitors of human herpesviruses. Antiviral Res. 2015 Sep;12116-23. doi: 10.1016/j.antiviral.2015.06.005. PubMed PMID: 26079681; PMCID: PMC4536133.
Chiang CH, Chu CT, Wiley CA. A 67 Year-Old Man with Multiple Sclerosis and New Cerebellar Lesions. Brain Pathol. 2015 Jul;25(4):507-8. doi: 10.1111/bpa.12269. PubMed PMID: 26095593.
Bissel SJ, Auer RN, Chiang CH, Kofler J, Murdoch GH, Nix WA, Painter M, Richer M, Sartelet H, Wang G, Wiley CA. Human Parechovirus 3 Meningitis and Fatal Leukoencephalopathy. J Neuropathol Exp Neurol. 2015 Aug;74(8):767-77. doi: 10.1097/NEN.0000000000000215. PubMed PMID: 26115191.
Qu Z, Sun F, Zhou J, Li L, Shapiro SD, Xiao G. Interleukin-6 Prevents the Initiation but Enhances the Progression of Lung Cancer. Cancer Res. 2015 Aug 15;75(16):3209-15. doi: 10.1158/0008-5472.CAN-14-3042. PubMed PMID: 26122841; PMCID: PMC4537823.
Pirrone GF, Emert-Sedlak LA, Wales TE, Smithgall TE, Kent MS, Engen JR. Membrane-Associated Conformation of HIV-1 Nef Investigated with Hydrogen Exchange Mass Spectrometry at a Langmuir Monolayer. Anal Chem. 2015 Jul 21;87(14):7030-5. doi: 10.1021/acs.analchem.5b01725. PubMed PMID: 26133569; PMCID: PMC4509969.
Han J, Chu J, Keung Chan W, Zhang J, Wang Y, Cohen JB, Victor A, Meisen WH, Kim SH, Grandi P, Wang QE, He X, Nakano I, Chiocca EA, Glorioso Iii JC, Kaur B, Caligiuri MA, Yu J. CAR-Engineered NK Cells Targeting Wild-Type EGFR and EGFRvIII Enhance Killing of Glioblastoma and Patient-Derived Glioblastoma Stem Cells. Sci Rep. 2015 Jul 9;511483. doi: 10.1038/srep11483. PubMed PMID: 26155832; PMCID: PMC4496728.
Seaberg EC, Witt MD, Jacobson LP, Detels R, Rinaldo CR, Margolick JB, Young S, Phair JP, Thio CL. Spontaneous Clearance of the Hepatitis C Virus Among Men Who Have Sex With Men. Clin Infect Dis. 2015 Nov 1;61(9):1381-8. doi: 10.1093/cid/civ562. PubMed PMID: 26175521; PMCID: PMC4599393.
He T, Brocca-Cofano E, Gillespie DG, Xu C, Stock JL, Ma D, Policicchio BB, Raehtz KD, Rinaldo CR, Apetrei C, Jackson EK, Macatangay BJ, Pandrea I. Critical Role for the Adenosine Pathway in Controlling Simian Immunodeficiency Virus-Related Immune Activation and Inflammation in Gut Mucosal Tissues. J Virol. 2015 Sep;89(18):9616-30. doi: 10.1128/JVI.01196-15. PubMed PMID: 26178986; PMCID: PMC4542384.
Liu H, Tang X, Srivastava A, Pécot T, Daniel P, Hemmelgarn B, Reyes S, Fackler N, Bajwa A, Kladney R, Koivisto C, Chen Z, Wang Q, Huang K, Machiraju R, Sáenz-Robles MT, Cantalupo P, Pipas JM, Leone G. Redeployment of Myc and E2f1-3 drives Rb-deficient cell cycles. Nat Cell Biol. 2015 Aug;17(8):1036-48. doi: 10.1038/ncb3210. PubMed PMID: 26192440; PMCID: PMC4526313.
Thomann S, Boscheinen JB, Vogel K, Knipe DM, DeLuca N, Gross S, Schuler-Thurner B, Schuster P, Schmidt B. Combined cytotoxic activity of an infectious, but non-replicative herpes simplex virus type 1 and plasmacytoid dendritic cells against tumour cells. Immunology. 2015 Oct;146(2):327-38. doi: 10.1111/imm.12509. PubMed PMID: 26194553; PMCID: PMC4582973.
Majima T, Funahashi Y, Takai S, Goins WF, Gotoh M, Tyagi P, Glorioso JC, Yoshimura N. Herpes Simplex Virus Vector-Mediated Gene Delivery of Poreless TRPV1 Channels Reduces Bladder Overactivity and Nociception in Rats. Hum Gene Ther. 2015 Nov;26(11):734-42. doi: 10.1089/hum.2015.026. PubMed PMID: 26204493; PMCID: PMC4651024.
Grover P, Shi H, Baumgartner M, Camacho CJ, Smithgall TE. Fluorescence Polarization Screening Assays for Small Molecule Allosteric Modulators of ABL Kinase Function. PLoS One. 2015;10(7):e0133590. doi: 10.1371/journal.pone.0133590. PubMed PMID: 26222440; PMCID: PMC4519180.
Tao Y, Rotem A, Zhang H, Cockrell SK, Koehler SA, Chang CB, Ung LW, Cantalupo PG, Ren Y, Lin JS, Feldman AB, Wobus CE, Pipas JM, Weitz DA. Artifact-Free Quantification and Sequencing of Rare Recombinant Viruses by Using Drop-Based Microfluidics. Chembiochem. 2015 Oct 12;16(15):2167-71. doi: 10.1002/cbic.201500384. PubMed PMID: 26247541.
Flores RR, Kim E, Zhou L, Yang C, Zhao J, Gambotto A, Robbins PD. IL-Y, a synthetic member of the IL-12 cytokine family, suppresses the development of type 1 diabetes in NOD mice. Eur J Immunol. 2015 Nov;45(11):3114-25. doi: 10.1002/eji.201445403. PubMed PMID: 26260044; PMCID: PMC4823813.
Harris KG, Morosky SA, Drummond CG, Patel M, Kim C, Stolz DB, Bergelson JM, Cherry S, Coyne CB. RIP3 Regulates Autophagy and Promotes Coxsackievirus B3 Infection of Intestinal Epithelial Cells. Cell Host Microbe. 2015 Aug 12;18(2):221-32. doi: 10.1016/j.chom.2015.07.007. PubMed PMID: 26269957; PMCID: PMC4562276.
Wiley CA, Bhardwaj N, Ross TM, Bissel SJ. Emerging Infections of CNS: Avian Influenza A Virus, Rift Valley Fever Virus and Human Parechovirus. Brain Pathol. 2015 Sep;25(5):634-50. doi: 10.1111/bpa.12281. PubMed PMID: 26276027; PMCID: PMC4538697.
Garg AV, Amatya N, Chen K, Cruz JA, Grover P, Whibley N, Conti HR, Hernandez Mir G, Sirakova T, Childs EC, Smithgall TE, Biswas PS, Kolls JK, McGeachy MJ, Kolattukudy PE, Gaffen SL. MCPIP1 Endoribonuclease Activity Negatively Regulates Interleukin-17-Mediated Signaling and Inflammation. Immunity. 2015 Sep 15;43(3):475-87. doi: 10.1016/j.immuni.2015.07.021. PubMed PMID: 26320658; PMCID: PMC4575280.
Han HS, Cantalupo PG, Rotem A, Cockrell SK, Carbonnaux M, Pipas JM, Weitz DA. Whole-Genome Sequencing of a Single Viral Species from a Highly Heterogeneous Sample. Angew Chem Int Ed Engl. 2015 Nov 16;54(47):13985-8. doi: 10.1002/anie.201507047. PubMed PMID: 26316088; PMCID: PMC4715630.
Spencer S, Chung J, Thompson M, Piedra PA, Jewell A, Avadhanula V, Mei M, Jackson ML, Meece J, Sundaram M, Belongia EA, Cross R, Johnson E, Bullotta A, Rinaldo C, Gaglani M, Murthy K, Clipper L, Berman L, Flannery B. Factors associated with real-time RT-PCR cycle threshold values among medically attended influenza episodes. J Med Virol. 2016 Apr;88(4):719-23. doi: 10.1002/jmv.24373. PubMed PMID: 26334765.
Shu Q, Lennemann NJ, Sarkar SN, Sadovsky Y, Coyne CB. ADAP2 Is an Interferon Stimulated Gene That Restricts RNA Virus Entry. PLoS Pathog. 2015 Sep;11(9):e1005150. doi: 10.1371/journal.ppat.1005150. PubMed PMID: 26372645; PMCID: PMC4570769.
Hu M, Wang C, Li W, Lu W, Bai Z, Qin D, Yan Q, Zhu J, Krueger BJ, Renne R, Gao SJ, Lu C. A KSHV microRNA Directly Targets G Protein-Coupled Receptor Kinase 2 to Promote the Migration and Invasion of Endothelial Cells by Inducing CXCR2 and Activating AKT Signaling. PLoS Pathog. 2015 Sep;11(9):e1005171. doi: 10.1371/journal.ppat.1005171. PubMed PMID: 26402907; PMCID: PMC4581863.
Mouillet JF, Ouyang Y, Coyne CB, Sadovsky Y. MicroRNAs in placental health and disease. Am J Obstet Gynecol. 2015 Oct;213(4 Suppl):S163-72. doi: 10.1016/j.ajog.2015.05.057. PubMed PMID: 26428496; PMCID: PMC4592520.
Wales TE, Hochrein JM, Morgan CR, Emert-Sedlak LA, Smithgall TE, Engen JR. Subtle Dynamic Changes Accompany Hck Activation by HIV-1 Nef and are Reversed by an Antiretroviral Kinase Inhibitor. Biochemistry. 2015 Oct 20;54(41):6382-91. doi: 10.1021/acs.biochem.5b00875. PubMed PMID: 26440750; PMCID: PMC4615603.
Yao S, Hu M, Hao T, Li W, Xue X, Xue M, Zhu X, Zhou F, Qin D, Yan Q, Zhu J, Gao SJ, Lu C. MiRNA-891a-5p mediates HIV-1 Tat and KSHV Orf-K1 synergistic induction of angiogenesis by activating NF-κB signaling. Nucleic Acids Res. 2015 Oct 30;43(19):9362-78. doi: 10.1093/nar/gkv988. PubMed PMID: 26446987; PMCID: PMC4627096.
Koharudin LM, Debiec KT, Gronenborn AM. Structural Insight into Fungal Cell Wall Recognition by a CVNH Protein with a Single LysM Domain. Structure. 2015 Nov 3;23(11):2143-54. doi: 10.1016/j.str.2015.07.023. PubMed PMID: 26455798; PMCID: PMC4635050.
Wiley CA, Bissel SJ, Murdoch GH. Role of CHI3L1 in neuroinflammation. Clin Immunol. 2015 Dec;161(2):354. doi: 10.1016/j.clim.2015.10.003. PubMed PMID: 26477483.
Shuda M, Chang Y, Moore PS. Mitotic 4E-BP1 hyperphosphorylation and cap-dependent translation. Cell Cycle. 2015;14(19):3005-6. doi: 10.1080/15384101.2015.1084192. PubMed PMID: 26496165; PMCID: PMC4825615.
Harris KG, Coyne CB. Unc93b Induces Apoptotic Cell Death and Is Cleaved by Host and Enteroviral Proteases. PLoS One. 2015;10(10):e0141383. doi: 10.1371/journal.pone.0141383. PubMed PMID: 26509685; PMCID: PMC4624986.
Matei E, Gronenborn AM. (19)F Paramagnetic Relaxation Enhancement: A Valuable Tool for Distance Measurements in Proteins. Angew Chem Int Ed Engl. 2016 Jan 4;55(1):150-4. doi: 10.1002/anie.201508464. PubMed PMID: 26510989; PMCID: PMC4715678.
Gupta T, Robles MT, Schowalter RM, Buck CB, Pipas JM. Expression of the small T antigen of Lymphotropic Papovavirus is sufficient to transform primary mouse embryo fibroblasts. Virology. 2016 Jan;487112-20. doi: 10.1016/j.virol.2015.10.003. PubMed PMID: 26517398; PMCID: PMC4679568.
Shuda M, Guastafierro A, Geng X, Shuda Y, Ostrowski SM, Lukianov S, Jenkins FJ, Honda K, Maricich SM, Moore PS, Chang Y. Merkel Cell Polyomavirus Small T Antigen Induces Cancer and Embryonic Merkel Cell Proliferation in a Transgenic Mouse Model. PLoS One. 2015;10(11):e0142329. doi: 10.1371/journal.pone.0142329. PubMed PMID: 26544690; PMCID: PMC4636375.
Colgrove RC, Liu X, Griffiths A, Raja P, Deluca NA, Newman RM, Coen DM, Knipe DM. History and genomic sequence analysis of the herpes simplex virus 1 KOS and KOS1.1 sub-strains. Virology. 2016 Jan;487215-21. doi: 10.1016/j.virol.2015.09.026. PubMed PMID: 26547038; PMCID: PMC4679709.
Lu M, Hou G, Zhang H, Suiter CL, Ahn J, Byeon IJ, Perilla JR, Langmead CJ, Hung I, Gor'kov PL, Gan Z, Brey W, Aiken C, Zhang P, Schulten K, Gronenborn AM, Polenova T. Dynamic allostery governs cyclophilin A-HIV capsid interplay. Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):14617-22. doi: 10.1073/pnas.1516920112. PubMed PMID: 26553990; PMCID: PMC4664340.
Sharaf NG, Gronenborn AM. (19)F-modified proteins and (19)F-containing ligands as tools in solution NMR studies of protein interactions. Methods Enzymol. 2015;56567-95. doi: 10.1016/bs.mie.2015.05.014. PubMed PMID: 26577728.
Huet A, Duda RL, Hendrix RW, Boulanger P, Conway JF. Correct Assembly of the Bacteriophage T5 Procapsid Requires Both the Maturation Protease and the Portal Complex. J Mol Biol. 2016 Jan 16;428(1):165-181. doi: 10.1016/j.jmb.2015.11.019. PubMed PMID: 26616586; PMCID: PMC4738002.
Cox RG, Mainou BA, Johnson M, Hastings AK, Schuster JE, Dermody TS, Williams JV. Human Metapneumovirus Is Capable of Entering Cells by Fusion with Endosomal Membranes. PLoS Pathog. 2015 Dec;11(12):e1005303. doi: 10.1371/journal.ppat.1005303. PubMed PMID: 26629703; PMCID: PMC4667933.
Macatangay BJ, Riddler SA, Wheeler ND, Spindler J, Lawani M, Hong F, Buffo MJ, Whiteside TL, Kearney MF, Mellors JW, Rinaldo CR. Therapeutic Vaccination With Dendritic Cells Loaded With Autologous HIV Type 1-Infected Apoptotic Cells. J Infect Dis. 2016 May 1;213(9):1400-9. doi: 10.1093/infdis/jiv582. PubMed PMID: 26647281; PMCID: PMC4813736.
Hendricks MR, Lashua LP, Fischer DK, Flitter BA, Eichinger KM, Durbin JE, Sarkar SN, Coyne CB, Empey KM, Bomberger JM. Respiratory syncytial virus infection enhances Pseudomonas aeruginosa biofilm growth through dysregulation of nutritional immunity. Proc Natl Acad Sci U S A. 2016 Feb 9;113(6):1642-7. doi: 10.1073/pnas.1516979113. PubMed PMID: 26729873; PMCID: PMC4760822.
Liu X, Hillwig ML, Koharudin LM, Gronenborn AM. Unified biogenesis of ambiguine, fischerindole, hapalindole and welwitindolinone: identification of a monogeranylated indolenine as a cryptic common biosynthetic intermediate by an unusual magnesium-dependent aromatic prenyltransferase. Chem Commun (Camb). 2016 Jan 28;52(8):1737-40. doi: 10.1039/c5cc10060g. PubMed PMID: 26740122; PMCID: PMC4720564.
Klionsky DJ, Abdelmohsen K, Abe A, Abedin MJ, Abeliovich H, Acevedo Arozena A, Adachi H, Adams CM, Adams PD, Adeli K, Adhihetty PJ, Adler SG, Agam G, Agarwal R, Aghi MK, Agnello M, Agostinis P, Aguilar PV, Aguirre-Ghiso J, Airoldi EM, Ait-Si-Ali S, Akematsu T, Akporiaye ET, Al-Rubeai M, Albaiceta GM, Albanese C, Albani D, Albert ML, Aldudo J, Algül H, Alirezaei M, Alloza I, Almasan A, Almonte-Beceril M, Alnemri ES, Alonso C, Altan-Bonnet N, Altieri DC, Alvarez S, Alvarez-Erviti L, Alves S, Amadoro G, Amano A, Amantini C, Ambrosio S, Amelio I, Amer AO, Amessou M, Amon A, An Z, Anania FA, Andersen SU, Andley UP, Andreadi CK, Andrieu-Abadie N, Anel A, Ann DK, Anoopkumar-Dukie S, Antonioli M, Aoki H, Apostolova N, Aquila S, Aquilano K, Araki K, Arama E, Aranda A, Araya J, Arcaro A, Arias E, Arimoto H, Ariosa AR, Armstrong JL, Arnould T, Arsov I, Asanuma K, Askanas V, Asselin E, Atarashi R, Atherton SS, Atkin JD, Attardi LD, Auberger P, Auburger G, Aurelian L, Autelli R, Avagliano L, Avantaggiati ML, Avrahami L, Awale S, Azad N, Bachetti T, Backer JM, Bae DH, Bae JS, Bae ON, Bae SH, Baehrecke EH, Baek SH, Baghdiguian S, Bagniewska-Zadworna A, Bai H, Bai J, Bai XY, Bailly Y, Balaji KN, Balduini W, Ballabio A, Balzan R, Banerjee R, Bánhegyi G, Bao H, Barbeau B, Barrachina MD, Barreiro E, Bartel B, Bartolomé A, Bassham DC, Bassi MT, Bast RC Jr, Basu A, Batista MT, Batoko H, Battino M, Bauckman K, Baumgarner BL, Bayer KU, Beale R, Beaulieu JF, Beck GR Jr, Becker C, Beckham JD, Bédard PA, Bednarski PJ, Begley TJ, Behl C, Behrends C, Behrens GM, Behrns KE, Bejarano E, Belaid A, Belleudi F, Bénard G, Berchem G, Bergamaschi D, Bergami M, Berkhout B, Berliocchi L, Bernard A, Bernard M, Bernassola F, Bertolotti A, Bess AS, Besteiro S, Bettuzzi S, Bhalla S, Bhattacharyya S, Bhutia SK, Biagosch C, Bianchi MW, Biard-Piechaczyk M, Billes V, Bincoletto C, Bingol B, Bird SW, Bitoun M, Bjedov I, Blackstone C, Blanc L, Blanco GA, Blomhoff HK, Boada-Romero E, Böckler S, Boes M, Boesze-Battaglia K, Boise LH, Bolino A, Boman A, Bonaldo P, Bordi M, Bosch J, Botana LM, Botti J, Bou G, Bouché M, Bouchecareilh M, Boucher MJ, Boulton ME, Bouret SG, Boya P, Boyer-Guittaut M, Bozhkov PV, Brady N, Braga VM, Brancolini C, Braus GH, Bravo-San Pedro JM, Brennan LA, Bresnick EH, Brest P, Bridges D, Bringer MA, Brini M, Brito GC, Brodin B, Brookes PS, Brown EJ, Brown K, Broxmeyer HE, Bruhat A, Brum PC, Brumell JH, Brunetti-Pierri N, Bryson-Richardson RJ, Buch S, Buchan AM, Budak H, Bulavin DV, Bultman SJ, Bultynck G, Bumbasirevic V, Burelle Y, Burke RE, Burmeister M, Bütikofer P, Caberlotto L, Cadwell K, Cahova M, Cai D, Cai J, Cai Q, Calatayud S, Camougrand N, Campanella M, Campbell GR, Campbell M, Campello S, Candau R, Caniggia I, Cantoni L, Cao L, Caplan AB, Caraglia M, Cardinali C, Cardoso SM, Carew JS, Carleton LA, Carlin CR, Carloni S, Carlsson SR, Carmona-Gutierrez D, Carneiro LA, Carnevali O, Carra S, Carrier A, Carroll B, Casas C, Casas J, Cassinelli G, Castets P, Castro-Obregon S, Cavallini G, Ceccherini I, Cecconi F, Cederbaum AI, Ceña V, Cenci S, Cerella C, Cervia D, Cetrullo S, Chaachouay H, Chae HJ, Chagin AS, Chai CY, Chakrabarti G, Chamilos G, Chan EY, Chan MT, Chandra D, Chandra P, Chang CP, Chang RC, Chang TY, Chatham JC, Chatterjee S, Chauhan S, Che Y, Cheetham ME, Cheluvappa R, Chen CJ, Chen G, Chen GC, Chen G, Chen H, Chen JW, Chen JK, Chen M, Chen M, Chen P, Chen Q, Chen Q, Chen SD, Chen S, Chen SS, Chen W, Chen WJ, Chen WQ, Chen W, Chen X, Chen YH, Chen YG, Chen Y, Chen Y, Chen Y, Chen YJ, Chen YQ, Chen Y, Chen Z, Chen Z, Cheng A, Cheng CH, Cheng H, Cheong H, Cherry S, Chesney J, Cheung CH, Chevet E, Chi HC, Chi SG, Chiacchiera F, Chiang HL, Chiarelli R, Chiariello M, Chieppa M, Chin LS, Chiong M, Chiu GN, Cho DH, Cho SG, Cho WC, Cho YY, Cho YS, Choi AM, Choi EJ, Choi EK, Choi J, Choi ME, Choi SI, Chou TF, Chouaib S, Choubey D, Choubey V, Chow KC, Chowdhury K, Chu CT, Chuang TH, Chun T, Chung H, Chung T, Chung YL, Chwae YJ, Cianfanelli V, Ciarcia R, Ciechomska IA, Ciriolo MR, Cirone M, Claerhout S, Clague MJ, Clària J, Clarke PG, Clarke R, Clementi E, Cleyrat C, Cnop M, Coccia EM, Cocco T, Codogno P, Coers J, Cohen EE, Colecchia D, Coletto L, Coll NS, Colucci-Guyon E, Comincini S, Condello M, Cook KL, Coombs GH, Cooper CD, Cooper JM, Coppens I, Corasaniti MT, Corazzari M, Corbalan R, Corcelle-Termeau E, Cordero MD, Corral-Ramos C, Corti O, Cossarizza A, Costelli P, Costes S, Cotman SL, Coto-Montes A, Cottet S, Couve E, Covey LR, Cowart LA, Cox JS, Coxon FP, Coyne CB, Cragg MS, Craven RJ, Crepaldi T, Crespo JL, Criollo A, Crippa V, Cruz MT, Cuervo AM, Cuezva JM, Cui T, Cutillas PR, Czaja MJ, Czyzyk-Krzeska MF, Dagda RK, Dahmen U, Dai C, Dai W, Dai Y, Dalby KN, Dalla Valle L, Dalmasso G, D'Amelio M, Damme M, Darfeuille-Michaud A, Dargemont C, Darley-Usmar VM, Dasarathy S, Dasgupta B, Dash S, Dass CR, Davey HM, Davids LM, Dávila D, Davis RJ, Dawson TM, Dawson VL, Daza P, de Belleroche J, de Figueiredo P, de Figueiredo RC, de la Fuente J, De Martino L, De Matteis A, De Meyer GR, De Milito A, De Santi M, de Souza W, De Tata V, De Zio D, Debnath J, Dechant R, Decuypere JP, Deegan S, Dehay B, Del Bello B, Del Re DP, Delage-Mourroux R, Delbridge LM, Deldicque L, Delorme-Axford E, Deng Y, Dengjel J, Denizot M, Dent P, Der CJ, Deretic V, Derrien B, Deutsch E, Devarenne TP, Devenish RJ, Di Bartolomeo S, Di Daniele N, Di Domenico F, Di Nardo A, Di Paola S, Di Pietro A, Di Renzo L, DiAntonio A, Díaz-Araya G, Díaz-Laviada I, Diaz-Meco MT, Diaz-Nido J, Dickey CA, Dickson RC, Diederich M, Digard P, Dikic I, Dinesh-Kumar SP, Ding C, Ding WX, Ding Z, Dini L, Distler JH, Diwan A, Djavaheri-Mergny M, Dmytruk K, Dobson RC, Doetsch V, Dokladny K, Dokudovskaya S, Donadelli M, Dong XC, Dong X, Dong Z, Donohue TM Jr, Doran KS, D'Orazi G, Dorn GW 2nd, Dosenko V, Dridi S, Drucker L, Du J, Du LL, Du L, du Toit A, Dua P, Duan L, Duann P, Dubey VK, Duchen MR, Duchosal MA, Duez H, Dugail I, Dumit VI, Duncan MC, Dunlop EA, Dunn WA Jr, Dupont N, Dupuis L, Durán RV, Durcan TM, Duvezin-Caubet S, Duvvuri U, Eapen V, Ebrahimi-Fakhari D, Echard A, Eckhart L, Edelstein CL, Edinger AL, Eichinger L, Eisenberg T, Eisenberg-Lerner A, Eissa NT, El-Deiry WS, El-Khoury V, Elazar Z, Eldar-Finkelman H, Elliott CJ, Emanuele E, Emmenegger U, Engedal N, Engelbrecht AM, Engelender S, Enserink JM, Erdmann R, Erenpreisa J, Eri R, Eriksen JL, Erman A, Escalante R, Eskelinen EL, Espert L, Esteban-Martínez L, Evans TJ, Fabri M, Fabrias G, Fabrizi C, Facchiano A, Færgeman NJ, Faggioni A, Fairlie WD, Fan C, Fan D, Fan J, Fang S, Fanto M, Fanzani A, Farkas T, Faure M, Favier FB, Fearnhead H, Federici M, Fei E, Felizardo TC, Feng H, Feng Y, Feng Y, Ferguson TA, Fernández ÁF, Fernandez-Barrena MG, Fernandez-Checa JC, Fernández-López A, Fernandez-Zapico ME, Feron O, Ferraro E, Ferreira-Halder CV, Fesus L, Feuer R, Fiesel FC, Filippi-Chiela EC, Filomeni G, Fimia GM, Fingert JH, Finkbeiner S, Finkel T, Fiorito F, Fisher PB, Flajolet M, Flamigni F, Florey O, Florio S, Floto RA, Folini M, Follo C, Fon EA, Fornai F, Fortunato F, Fraldi A, Franco R, Francois A, François A, Frankel LB, Fraser ID, Frey N, Freyssenet DG, Frezza C, Friedman SL, Frigo DE, Fu D, Fuentes JM, Fueyo J, Fujitani Y, Fujiwara Y, Fujiya M, Fukuda M, Fulda S, Fusco C, Gabryel B, Gaestel M, Gailly P, Gajewska M, Galadari S, Galili G, Galindo I, Galindo MF, Galliciotti G, Galluzzi L, Galluzzi L, Galy V, Gammoh N, Gandy S, Ganesan AK, Ganesan S, Ganley IG, Gannagé M, Gao FB, Gao F, Gao JX, García Nannig L, García Véscovi E, Garcia-Macía M, Garcia-Ruiz C, Garg AD, Garg PK, Gargini R, Gassen NC, Gatica D, Gatti E, Gavard J, Gavathiotis E, Ge L, Ge P, Ge S, Gean PW, Gelmetti V, Genazzani AA, Geng J, Genschik P, Gerner L, Gestwicki JE, Gewirtz DA, Ghavami S, Ghigo E, Ghosh D, Giammarioli AM, Giampieri F, Giampietri C, Giatromanolaki A, Gibbings DJ, Gibellini L, Gibson SB, Ginet V, Giordano A, Giorgini F, Giovannetti E, Girardin SE, Gispert S, Giuliano S, Gladson CL, Glavic A, Gleave M, Godefroy N, Gogal RM Jr, Gokulan K, Goldman GH, Goletti D, Goligorsky MS, Gomes AV, Gomes LC, Gomez H, Gomez-Manzano C, Gómez-Sánchez R, Gonçalves DA, Goncu E, Gong Q, Gongora C, Gonzalez CB, Gonzalez-Alegre P, Gonzalez-Cabo P, González-Polo RA, Goping IS, Gorbea C, Gorbunov NV, Goring DR, Gorman AM, Gorski SM, Goruppi S, Goto-Yamada S, Gotor C, Gottlieb RA, Gozes I, Gozuacik D, Graba Y, Graef M, Granato GE, Grant GD, Grant S, Gravina GL, Green DR, Greenhough A, Greenwood MT, Grimaldi B, Gros F, Grose C, Groulx JF, Gruber F, Grumati P, Grune T, Guan JL, Guan KL, Guerra B, Guillen C, Gulshan K, Gunst J, Guo C, Guo L, Guo M, Guo W, Guo XG, Gust AA, Gustafsson ÅB, Gutierrez E, Gutierrez MG, Gwak HS, Haas A, Haber JE, Hadano S, Hagedorn M, Hahn DR, Halayko AJ, Hamacher-Brady A, Hamada K, Hamai A, Hamann A, Hamasaki M, Hamer I, Hamid Q, Hammond EM, Han F, Han W, Handa JT, Hanover JA, Hansen M, Harada M, Harhaji-Trajkovic L, Harper JW, Harrath AH, Harris AL, Harris J, Hasler U, Hasselblatt P, Hasui K, Hawley RG, Hawley TS, He C, He CY, He F, He G, He RR, He XH, He YW, He YY, Heath JK, Hébert MJ, Heinzen RA, Helgason GV, Hensel M, Henske EP, Her C, Herman PK, Hernández A, Hernandez C, Hernández-Tiedra S, Hetz C, Hiesinger PR, Higaki K, Hilfiker S, Hill BG, Hill JA, Hill WD, Hino K, Hofius D, Hofman P, Höglinger GU, Höhfeld J, Holz MK, Hong Y, Hood DA, Hoozemans JJ, Hoppe T, Hsu C, Hsu CY, Hsu LC, Hu D, Hu G, Hu HM, Hu H, Hu MC, Hu YC, Hu ZW, Hua F, Hua Y, Huang C, Huang HL, Huang KH, Huang KY, Huang S, Huang S, Huang WP, Huang YR, Huang Y, Huang Y, Huber TB, Huebbe P, Huh WK, Hulmi JJ, Hur GM, Hurley JH, Husak Z, Hussain SN, Hussain S, Hwang JJ, Hwang S, Hwang TI, Ichihara A, Imai Y, Imbriano C, Inomata M, Into T, Iovane V, Iovanna JL, Iozzo RV, Ip NY, Irazoqui JE, Iribarren P, Isaka Y, Isakovic AJ, Ischiropoulos H, Isenberg JS, Ishaq M, Ishida H, Ishii I, Ishmael JE, Isidoro C, Isobe K, Isono E, Issazadeh-Navikas S, Itahana K, Itakura E, Ivanov AI, Iyer AK, Izquierdo JM, Izumi Y, Izzo V, Jäättelä M, Jaber N, Jackson DJ, Jackson WT, Jacob TG, Jacques TS, Jagannath C, Jain A, Jana NR, Jang BK, Jani A, Janji B, Jannig PR, Jansson PJ, Jean S, Jendrach M, Jeon JH, Jessen N, Jeung EB, Jia K, Jia L, Jiang H, Jiang H, Jiang L, Jiang T, Jiang X, Jiang X, Jiang X, Jiang Y, Jiang Y, Jiménez A, Jin C, Jin H, Jin L, Jin M, Jin S, Jinwal UK, Jo EK, Johansen T, Johnson DE, Johnson GV, Johnson JD, Jonasch E, Jones C, Joosten LA, Jordan J, Joseph AM, Joseph B, Joubert AM, Ju D, Ju J, Juan HF, Juenemann K, Juhász G, Jung HS, Jung JU, Jung YK, Jungbluth H, Justice MJ, Jutten B, Kaakoush NO, Kaarniranta K, Kaasik A, Kabuta T, Kaeffer B, Kågedal K, Kahana A, Kajimura S, Kakhlon O, Kalia M, Kalvakolanu DV, Kamada Y, Kambas K, Kaminskyy VO, Kampinga HH, Kandouz M, Kang C, Kang R, Kang TC, Kanki T, Kanneganti TD, Kanno H, Kanthasamy AG, Kantorow M, Kaparakis-Liaskos M, Kapuy O, Karantza V, Karim MR, Karmakar P, Kaser A, Kaushik S, Kawula T, Kaynar AM, Ke PY, Ke ZJ, Kehrl JH, Keller KE, Kemper JK, Kenworthy AK, Kepp O, Kern A, Kesari S, Kessel D, Ketteler R, Kettelhut Ido C, Khambu B, Khan MM, Khandelwal VK, Khare S, Kiang JG, Kiger AA, Kihara A, Kim AL, Kim CH, Kim DR, Kim DH, Kim EK, Kim HY, Kim HR, Kim JS, Kim JH, Kim JC, Kim JH, Kim KW, Kim MD, Kim MM, Kim PK, Kim SW, Kim SY, Kim YS, Kim Y, Kimchi A, Kimmelman AC, Kimura T, King JS, Kirkegaard K, Kirkin V, Kirshenbaum LA, Kishi S, Kitajima Y, Kitamoto K, Kitaoka Y, Kitazato K, Kley RA, Klimecki WT, Klinkenberg M, Klucken J, Knævelsrud H, Knecht E, Knuppertz L, Ko JL, Kobayashi S, Koch JC, Koechlin-Ramonatxo C, Koenig U, Koh YH, Köhler K, Kohlwein SD, Koike M, Komatsu M, Kominami E, Kong D, Kong HJ, Konstantakou EG, Kopp BT, Korcsmaros T, Korhonen L, Korolchuk VI, Koshkina NV, Kou Y, Koukourakis MI, Koumenis C, Kovács AL, Kovács T, Kovacs WJ, Koya D, Kraft C, Krainc D, Kramer H, Kravic-Stevovic T, Krek W, Kretz-Remy C, Krick R, Krishnamurthy M, Kriston-Vizi J, Kroemer G, Kruer MC, Kruger R, Ktistakis NT, Kuchitsu K, Kuhn C, Kumar AP, Kumar A, Kumar A, Kumar D, Kumar D, Kumar R, Kumar S, Kundu M, Kung HJ, Kuno A, Kuo SH, Kuret J, Kurz T, Kwok T, Kwon TK, Kwon YT, Kyrmizi I, La Spada AR, Lafont F, Lahm T, Lakkaraju A, Lam T, Lamark T, Lancel S, Landowski TH, Lane DJ, Lane JD, Lanzi C, Lapaquette P, Lapierre LR, Laporte J, Laukkarinen J, Laurie GW, Lavandero S, Lavie L, LaVoie MJ, Law BY, Law HK, Law KB, Layfield R, Lazo PA, Le Cam L, Le Roch KG, Le Stunff H, Leardkamolkarn V, Lecuit M, Lee BH, Lee CH, Lee EF, Lee GM, Lee HJ, Lee H, Lee JK, Lee J, Lee JH, Lee JH, Lee M, Lee MS, Lee PJ, Lee SW, Lee SJ, Lee SJ, Lee SY, Lee SH, Lee SS, Lee SJ, Lee S, Lee YR, Lee YJ, Lee YH, Leeuwenburgh C, Lefort S, Legouis R, Lei J, Lei QY, Leib DA, Leibowitz G, Lekli I, Lemaire SD, Lemasters JJ, Lemberg MK, Lemoine A, Leng S, Lenz G, Lenzi P, Lerman LO, Lettieri Barbato D, Leu JI, Leung HY, Levine B, Lewis PA, Lezoualc'h F, Li C, Li F, Li FJ, Li J, Li K, Li L, Li M, Li M, Li Q, Li R, Li S, Li W, Li W, Li X, Li Y, Lian J, Liang C, Liang Q, Liao Y, Liberal J, Liberski PP, Lie P, Lieberman AP, Lim HJ, Lim KL, Lim K, Lima RT, Lin CS, Lin CF, Lin F, Lin F, Lin FC, Lin K, Lin KH, Lin PH, Lin T, Lin WW, Lin YS, Lin Y, Linden R, Lindholm D, Lindqvist LM, Lingor P, Linkermann A, Liotta LA, Lipinski MM, Lira VA, Lisanti MP, Liton PB, Liu B, Liu C, Liu CF, Liu F, Liu HJ, Liu J, Liu JJ, Liu JL, Liu K, Liu L, Liu L, Liu Q, Liu RY, Liu S, Liu S, Liu W, Liu XD, Liu X, Liu XH, Liu X, Liu X, Liu X, Liu Y, Liu Y, Liu Z, Liu Z, Liuzzi JP, Lizard G, Ljujic M, Lodhi IJ, Logue SE, Lokeshwar BL, Long YC, Lonial S, Loos B, López-Otín C, López-Vicario C, Lorente M, Lorenzi PL, Lõrincz P, Los M, Lotze MT, Lovat PE, Lu B, Lu B, Lu J, Lu Q, Lu SM, Lu S, Lu Y, Luciano F, Luckhart S, Lucocq JM, Ludovico P, Lugea A, Lukacs NW, Lum JJ, Lund AH, Luo H, Luo J, Luo S, Luparello C, Lyons T, Ma J, Ma Y, Ma Y, Ma Z, Machado J, Machado-Santelli GM, Macian F, MacIntosh GC, MacKeigan JP, Macleod KF, MacMicking JD, MacMillan-Crow LA, Madeo F, Madesh M, Madrigal-Matute J, Maeda A, Maeda T, Maegawa G, Maellaro E, Maes H, Magariños M, Maiese K, Maiti TK, Maiuri L, Maiuri MC, Maki CG, Malli R, Malorni W, Maloyan A, Mami-Chouaib F, Man N, Mancias JD, Mandelkow EM, Mandell MA, Manfredi AA, Manié SN, Manzoni C, Mao K, Mao Z, Mao ZW, Marambaud P, Marconi AM, Marelja Z, Marfe G, Margeta M, Margittai E, Mari M, Mariani FV, Marin C, Marinelli S, Mariño G, Markovic I, Marquez R, Martelli AM, Martens S, Martin KR, Martin SJ, Martin S, Martin-Acebes MA, Martín-Sanz P, Martinand-Mari C, Martinet W, Martinez J, Martinez-Lopez N, Martinez-Outschoorn U, Martínez-Velázquez M, Martinez-Vicente M, Martins WK, Mashima H, Mastrianni JA, Matarese G, Matarrese P, Mateo R, Matoba S, Matsumoto N, Matsushita T, Matsuura A, Matsuzawa T, Mattson MP, Matus S, Maugeri N, Mauvezin C, Mayer A, Maysinger D, Mazzolini GD, McBrayer MK, McCall K, McCormick C, McInerney GM, McIver SC, McKenna S, McMahon JJ, McNeish IA, Mechta-Grigoriou F, Medema JP, Medina DL, Megyeri K, Mehrpour M, Mehta JL, Mei Y, Meier UC, Meijer AJ, Meléndez A, Melino G, Melino S, de Melo EJ, Mena MA, Meneghini MD, Menendez JA, Menezes R, Meng L, Meng LH, Meng S, Menghini R, Menko AS, Menna-Barreto RF, Menon MB, Meraz-Ríos MA, Merla G, Merlini L, Merlot AM, Meryk A, Meschini S, Meyer JN, Mi MT, Miao CY, Micale L, Michaeli S, Michiels C, Migliaccio AR, Mihailidou AS, Mijaljica D, Mikoshiba K, Milan E, Miller-Fleming L, Mills GB, Mills IG, Minakaki G, Minassian BA, Ming XF, Minibayeva F, Minina EA, Mintern JD, Minucci S, Miranda-Vizuete A, Mitchell CH, Miyamoto S, Miyazawa K, Mizushima N, Mnich K, Mograbi B, Mohseni S, Moita LF, Molinari M, Molinari M, Møller AB, Mollereau B, Mollinedo F, Mongillo M, Monick MM, Montagnaro S, Montell C, Moore DJ, Moore MN, Mora-Rodriguez R, Moreira PI, Morel E, Morelli MB, Moreno S, Morgan MJ, Moris A, Moriyasu Y, Morrison JL, Morrison LA, Morselli E, Moscat J, Moseley PL, Mostowy S, Motori E, Mottet D, Mottram JC, Moussa CE, Mpakou VE, Mukhtar H, Mulcahy Levy JM, Muller S, Muñoz-Moreno R, Muñoz-Pinedo C, Münz C, Murphy ME, Murray JT, Murthy A, Mysorekar IU, Nabi IR, Nabissi M, Nader GA, Nagahara Y, Nagai Y, Nagata K, Nagelkerke A, Nagy P, Naidu SR, Nair S, Nakano H, Nakatogawa H, Nanjundan M, Napolitano G, Naqvi NI, Nardacci R, Narendra DP, Narita M, Nascimbeni AC, Natarajan R, Navegantes LC, Nawrocki ST, Nazarko TY, Nazarko VY, Neill T, Neri LM, Netea MG, Netea-Maier RT, Neves BM, Ney PA, Nezis IP, Nguyen HT, Nguyen HP, Nicot AS, Nilsen H, Nilsson P, Nishimura M, Nishino I, Niso-Santano M, Niu H, Nixon RA, Njar VC, Noda T, Noegel AA, Nolte EM, Norberg E, Norga KK, Noureini SK, Notomi S, Notterpek L, Nowikovsky K, Nukina N, Nürnberger T, O'Donnell VB, O'Donovan T, O'Dwyer PJ, Oehme I, Oeste CL, Ogawa M, Ogretmen B, Ogura Y, Oh YJ, Ohmuraya M, Ohshima T, Ojha R, Okamoto K, Okazaki T, Oliver FJ, Ollinger K, Olsson S, Orban DP, Ordonez P, Orhon I, Orosz L, O'Rourke EJ, Orozco H, Ortega AL, Ortona E, Osellame LD, Oshima J, Oshima S, Osiewacz HD, Otomo T, Otsu K, Ou JH, Outeiro TF, Ouyang DY, Ouyang H, Overholtzer M, Ozbun MA, Ozdinler PH, Ozpolat B, Pacelli C, Paganetti P, Page G, Pages G, Pagnini U, Pajak B, Pak SC, Pakos-Zebrucka K, Pakpour N, Palková Z, Palladino F, Pallauf K, Pallet N, Palmieri M, Paludan SR, Palumbo C, Palumbo S, Pampliega O, Pan H, Pan W, Panaretakis T, Pandey A, Pantazopoulou A, Papackova Z, Papademetrio DL, Papassideri I, Papini A, Parajuli N, Pardo J, Parekh VV, Parenti G, Park JI, Park J, Park OK, Parker R, Parlato R, Parys JB, Parzych KR, Pasquet JM, Pasquier B, Pasumarthi KB, Patschan D, Patterson C, Pattingre S, Pattison S, Pause A, Pavenstädt H, Pavone F, Pedrozo Z, Peña FJ, Peñalva MA, Pende M, Peng J, Penna F, Penninger JM, Pensalfini A, Pepe S, Pereira GJ, Pereira PC, Pérez-de la Cruz V, Pérez-Pérez ME, Pérez-Rodríguez D, Pérez-Sala D, Perier C, Perl A, Perlmutter DH, Perrotta I, Pervaiz S, Pesonen M, Pessin JE, Peters GJ, Petersen M, Petrache I, Petrof BJ, Petrovski G, Phang JM, Piacentini M, Pierdominici M, Pierre P, Pierrefite-Carle V, Pietrocola F, Pimentel-Muiños FX, Pinar M, Pineda B, Pinkas-Kramarski R, Pinti M, Pinton P, Piperdi B, Piret JM, Platanias LC, Platta HW, Plowey ED, Pöggeler S, Poirot M, Polčic P, Poletti A, Poon AH, Popelka H, Popova B, Poprawa I, Poulose SM, Poulton J, Powers SK, Powers T, Pozuelo-Rubio M, Prak K, Prange R, Prescott M, Priault M, Prince S, Proia RL, Proikas-Cezanne T, Prokisch H, Promponas VJ, Przyklenk K, Puertollano R, Pugazhenthi S, Puglielli L, Pujol A, Puyal J, Pyeon D, Qi X, Qian WB, Qin ZH, Qiu Y, Qu Z, Quadrilatero J, Quinn F, Raben N, Rabinowich H, Radogna F, Ragusa MJ, Rahmani M, Raina K, Ramanadham S, Ramesh R, Rami A, Randall-Demllo S, Randow F, Rao H, Rao VA, Rasmussen BB, Rasse TM, Ratovitski EA, Rautou PE, Ray SK, Razani B, Reed BH, Reggiori F, Rehm M, Reichert AS, Rein T, Reiner DJ, Reits E, Ren J, Ren X, Renna M, Reusch JE, Revuelta JL, Reyes L, Rezaie AR, Richards RI, Richardson DR, Richetta C, Riehle MA, Rihn BH, Rikihisa Y, Riley BE, Rimbach G, Rippo MR, Ritis K, Rizzi F, Rizzo E, Roach PJ, Robbins J, Roberge M, Roca G, Roccheri MC, Rocha S, Rodrigues CM, Rodríguez CI, de Cordoba SR, Rodriguez-Muela N, Roelofs J, Rogov VV, Rohn TT, Rohrer B, Romanelli D, Romani L, Romano PS, Roncero MI, Rosa JL, Rosello A, Rosen KV, Rosenstiel P, Rost-Roszkowska M, Roth KA, Roué G, Rouis M, Rouschop KM, Ruan DT, Ruano D, Rubinsztein DC, Rucker EB 3rd, Rudich A, Rudolf E, Rudolf R, Ruegg MA, Ruiz-Roldan C, Ruparelia AA, Rusmini P, Russ DW, Russo GL, Russo G, Russo R, Rusten TE, Ryabovol V, Ryan KM, Ryter SW, Sabatini DM, Sacher M, Sachse C, Sack MN, Sadoshima J, Saftig P, Sagi-Eisenberg R, Sahni S, Saikumar P, Saito T, Saitoh T, Sakakura K, Sakoh-Nakatogawa M, Sakuraba Y, Salazar-Roa M, Salomoni P, Saluja AK, Salvaterra PM, Salvioli R, Samali A, Sanchez AM, Sánchez-Alcázar JA, Sanchez-Prieto R, Sandri M, Sanjuan MA, Santaguida S, Santambrogio L, Santoni G, Dos Santos CN, Saran S, Sardiello M, Sargent G, Sarkar P, Sarkar S, Sarrias MR, Sarwal MM, Sasakawa C, Sasaki M, Sass M, Sato K, Sato M, Satriano J, Savaraj N, Saveljeva S, Schaefer L, Schaible UE, Scharl M, Schatzl HM, Schekman R, Scheper W, Schiavi A, Schipper HM, Schmeisser H, Schmidt J, Schmitz I, Schneider BE, Schneider EM, Schneider JL, Schon EA, Schönenberger MJ, Schönthal AH, Schorderet DF, Schröder B, Schuck S, Schulze RJ, Schwarten M, Schwarz TL, Sciarretta S, Scotto K, Scovassi AI, Screaton RA, Screen M, Seca H, Sedej S, Segatori L, Segev N, Seglen PO, Seguí-Simarro JM, Segura-Aguilar J, Seki E, Sell C, Seiliez I, Semenkovich CF, Semenza GL, Sen U, Serra AL, Serrano-Puebla A, Sesaki H, Setoguchi T, Settembre C, Shacka JJ, Shajahan-Haq AN, Shapiro IM, Sharma S, She H, Shen CK, Shen CC, Shen HM, Shen S, Shen W, Sheng R, Sheng X, Sheng ZH, Shepherd TG, Shi J, Shi Q, Shi Q, Shi Y, Shibutani S, Shibuya K, Shidoji Y, Shieh JJ, Shih CM, Shimada Y, Shimizu S, Shin DW, Shinohara ML, Shintani M, Shintani T, Shioi T, Shirabe K, Shiri-Sverdlov R, Shirihai O, Shore GC, Shu CW, Shukla D, Sibirny AA, Sica V, Sigurdson CJ, Sigurdsson EM, Sijwali PS, Sikorska B, Silveira WA, Silvente-Poirot S, Silverman GA, Simak J, Simmet T, Simon AK, Simon HU, Simone C, Simons M, Simonsen A, Singh R, Singh SV, Singh SK, Sinha D, Sinha S, Sinicrope FA, Sirko A, Sirohi K, Sishi BJ, Sittler A, Siu PM, Sivridis E, Skwarska A, Slack R, Slaninová I, Slavov N, Smaili SS, Smalley KS, Smith DR, Soenen SJ, Soleimanpour SA, Solhaug A, Somasundaram K, Son JH, Sonawane A, Song C, Song F, Song HK, Song JX, Song W, Soo KY, Sood AK, Soong TW, Soontornniyomkij V, Sorice M, Sotgia F, Soto-Pantoja DR, Sotthibundhu A, Sousa MJ, Spaink HP, Span PN, Spang A, Sparks JD, Speck PG, Spector SA, Spies CD, Springer W, Clair DS, Stacchiotti A, Staels B, Stang MT, Starczynowski DT, Starokadomskyy P, Steegborn C, Steele JW, Stefanis L, Steffan J, Stellrecht CM, Stenmark H, Stepkowski TM, Stern ST, Stevens C, Stockwell BR, Stoka V, Storchova Z, Stork B, Stratoulias V, Stravopodis DJ, Strnad P, Strohecker AM, Ström AL, Stromhaug P, Stulik J, Su YX, Su Z, Subauste CS, Subramaniam S, Sue CM, Suh SW, Sui X, Sukseree S, Sulzer D, Sun FL, Sun J, Sun J, Sun SY, Sun Y, Sun Y, Sun Y, Sundaramoorthy V, Sung J, Suzuki H, Suzuki K, Suzuki N, Suzuki T, Suzuki YJ, Swanson MS, Swanton C, Swärd K, Swarup G, Sweeney ST, Sylvester PW, Szatmari Z, Szegezdi E, Szlosarek PW, Taegtmeyer H, Tafani M, Taillebourg E, Tait SW, Takacs-Vellai K, Takahashi Y, Takáts S, Takemura G, Takigawa N, Talbot NJ, Tamagno E, Tamburini J, Tan CP, Tan L, Tan ML, Tan M, Tan YJ, Tanaka K, Tanaka M, Tang D, Tang D, Tang G, Tanida I, Tanji K, Tannous BA, Tapia JA, Tasset-Cuevas I, Tatar M, Tavassoly I, Tavernarakis N, Taylor A, Taylor GS, Taylor GA, Taylor JP, Taylor MJ, Tchetina EV, Tee AR, Teixeira-Clerc F, Telang S, Tencomnao T, Teng BB, Teng RJ, Terro F, Tettamanti G, Theiss AL, Theron AE, Thomas KJ, Thomé MP, Thomes PG, Thorburn A, Thorner J, Thum T, Thumm M, Thurston TL, Tian L, Till A, Ting JP, Titorenko VI, Toker L, Toldo S, Tooze SA, Topisirovic I, Torgersen ML, Torosantucci L, Torriglia A, Torrisi MR, Tournier C, Towns R, Trajkovic V, Travassos LH, Triola G, Tripathi DN, Trisciuoglio D, Troncoso R, Trougakos IP, Truttmann AC, Tsai KJ, Tschan MP, Tseng YH, Tsukuba T, Tsung A, Tsvetkov AS, Tu S, Tuan HY, Tucci M, Tumbarello DA, Turk B, Turk V, Turner RF, Tveita AA, Tyagi SC, Ubukata M, Uchiyama Y, Udelnow A, Ueno T, Umekawa M, Umemiya-Shirafuji R, Underwood BR, Ungermann C, Ureshino RP, Ushioda R, Uversky VN, Uzcátegui NL, Vaccari T, Vaccaro MI, Váchová L, Vakifahmetoglu-Norberg H, Valdor R, Valente EM, Vallette F, Valverde AM, Van den Berghe G, Van Den Bosch L, van den Brink GR, van der Goot FG, van der Klei IJ, van der Laan LJ, van Doorn WG, van Egmond M, van Golen KL, Van Kaer L, van Lookeren Campagne M, Vandenabeele P, Vandenberghe W, Vanhorebeek I, Varela-Nieto I, Vasconcelos MH, Vasko R, Vavvas DG, Vega-Naredo I, Velasco G, Velentzas AD, Velentzas PD, Vellai T, Vellenga E, Vendelbo MH, Venkatachalam K, Ventura N, Ventura S, Veras PS, Verdier M, Vertessy BG, Viale A, Vidal M, Vieira HL, Vierstra RD, Vigneswaran N, Vij N, Vila M, Villar M, Villar VH, Villarroya J, Vindis C, Viola G, Viscomi MT, Vitale G, Vogl DT, Voitsekhovskaja OV, von Haefen C, von Schwarzenberg K, Voth DE, Vouret-Craviari V, Vuori K, Vyas JM, Waeber C, Walker CL, Walker MJ, Walter J, Wan L, Wan X, Wang B, Wang C, Wang CY, Wang C, Wang C, Wang C, Wang D, Wang F, Wang F, Wang G, Wang HJ, Wang H, Wang HG, Wang H, Wang HD, Wang J, Wang J, Wang M, Wang MQ, Wang PY, Wang P, Wang RC, Wang S, Wang TF, Wang X, Wang XJ, Wang XW, Wang X, Wang X, Wang Y, Wang Y, Wang Y, Wang YJ, Wang Y, Wang Y, Wang YT, Wang Y, Wang ZN, Wappner P, Ward C, Ward DM, Warnes G, Watada H, Watanabe Y, Watase K, Weaver TE, Weekes CD, Wei J, Weide T, Weihl CC, Weindl G, Weis SN, Wen L, Wen X, Wen Y, Westermann B, Weyand CM, White AR, White E, Whitton JL, Whitworth AJ, Wiels J, Wild F, Wildenberg ME, Wileman T, Wilkinson DS, Wilkinson S, Willbold D, Williams C, Williams K, Williamson PR, Winklhofer KF, Witkin SS, Wohlgemuth SE, Wollert T, Wolvetang EJ, Wong E, Wong GW, Wong RW, Wong VK, Woodcock EA, Wright KL, Wu C, Wu D, Wu GS, Wu J, Wu J, Wu M, Wu M, Wu S, Wu WK, Wu Y, Wu Z, Xavier CP, Xavier RJ, Xia GX, Xia T, Xia W, Xia Y, Xiao H, Xiao J, Xiao S, Xiao W, Xie CM, Xie Z, Xie Z, Xilouri M, Xiong Y, Xu C, Xu C, Xu F, Xu H, Xu H, Xu J, Xu J, Xu J, Xu L, Xu X, Xu Y, Xu Y, Xu ZX, Xu Z, Xue Y, Yamada T, Yamamoto A, Yamanaka K, Yamashina S, Yamashiro S, Yan B, Yan B, Yan X, Yan Z, Yanagi Y, Yang DS, Yang JM, Yang L, Yang M, Yang PM, Yang P, Yang Q, Yang W, Yang WY, Yang X, Yang Y, Yang Y, Yang Z, Yang Z, Yao MC, Yao PJ, Yao X, Yao Z, Yao Z, Yasui LS, Ye M, Yedvobnick B, Yeganeh B, Yeh ES, Yeyati PL, Yi F, Yi L, Yin XM, Yip CK, Yoo YM, Yoo YH, Yoon SY, Yoshida K, Yoshimori T, Young KH, Yu H, Yu JJ, Yu JT, Yu J, Yu L, Yu WH, Yu XF, Yu Z, Yuan J, Yuan ZM, Yue BY, Yue J, Yue Z, Zacks DN, Zacksenhaus E, Zaffaroni N, Zaglia T, Zakeri Z, Zecchini V, Zeng J, Zeng M, Zeng Q, Zervos AS, Zhang DD, Zhang F, Zhang G, Zhang GC, Zhang H, Zhang H, Zhang H, Zhang H, Zhang J, Zhang J, Zhang J, Zhang J, Zhang JP, Zhang L, Zhang L, Zhang L, Zhang L, Zhang MY, Zhang X, Zhang XD, Zhang Y, Zhang Y, Zhang Y, Zhang Y, Zhang Y, Zhao M, Zhao WL, Zhao X, Zhao YG, Zhao Y, Zhao Y, Zhao YX, Zhao Z, Zhao ZJ, Zheng D, Zheng XL, Zheng X, Zhivotovsky B, Zhong Q, Zhou GZ, Zhou G, Zhou H, Zhou SF, Zhou XJ, Zhu H, Zhu H, Zhu WG, Zhu W, Zhu XF, Zhu Y, Zhuang SM, Zhuang X, Ziparo E, Zois CE, Zoladek T, Zong WX, Zorzano A, Zughaier SM. Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). Autophagy. 2016;12(1):1-222. doi: 10.1080/15548627.2015.1100356. PubMed PMID: 26799652; PMCID: PMC4835977.
Roberts JM, Tarafdar S, Joseph RE, Andreotti AH, Smithgall TE, Engen JR, Wales TE. Dynamics of the Tec-family tyrosine kinase SH3 domains. Protein Sci. 2016 Apr;25(4):852-64. doi: 10.1002/pro.2887. PubMed PMID: 26808198; PMCID: PMC4941224.
McNulty J, D'Aiuto L, Zhi Y, McClain L, Zepeda-Velázquez C, Ler S, Jenkins HA, Yee MB, Piazza P, Yolken RH, Kinchington PR, Nimgaonkar VL. iPSC Neuronal Assay Identifies Amaryllidaceae Pharmacophore with Multiple Effects against Herpesvirus Infections. ACS Med Chem Lett. 2016 Jan 14;7(1):46-50. doi: 10.1021/acsmedchemlett.5b00318. PubMed PMID: 26819664; PMCID: PMC4716588.
Garcia-Bates TM, Kim E, Concha-Benavente F, Trivedi S, Mailliard RB, Gambotto A, Ferris RL. Enhanced Cytotoxic CD8 T Cell Priming Using Dendritic Cell-Expressing Human Papillomavirus-16 E6/E7-p16INK4 Fusion Protein with Sequenced Anti-Programmed Death-1. J Immunol. 2016 Mar 15;196(6):2870-8. doi: 10.4049/jimmunol.1502027. PubMed PMID: 26851223; PMCID: PMC4779745.
Emert-Sedlak LA, Loughran HM, Shi H, Kulp JL 3rd, Shu ST, Zhao J, Day BW, Wrobel JE, Reitz AB, Smithgall TE. Synthesis and evaluation of orally active small molecule HIV-1 Nef antagonists. Bioorg Med Chem Lett. 2016 Mar 1;26(5):1480-1484. doi: 10.1016/j.bmcl.2016.01.043. PubMed PMID: 26852364; PMCID: PMC4756635.
Tang X, Liu H, Srivastava A, Pécot T, Chen Z, Wang Q, Huang K, Sáenz-Robles MT, Cantalupo P, Pipas J, Leone G. Transcriptome regulation and chromatin occupancy by E2F3 and MYC in mice. Sci Data. 2016 Feb 16;3160008. doi: 10.1038/sdata.2016.8. PubMed PMID: 26881867; PMCID: PMC4755127.
Liu C, Perilla JR, Ning J, Lu M, Hou G, Ramalho R, Himes BA, Zhao G, Bedwell GJ, Byeon IJ, Ahn J, Gronenborn AM, Prevelige PE, Rousso I, Aiken C, Polenova T, Schulten K, Zhang P. Cyclophilin A stabilizes the HIV-1 capsid through a novel non-canonical binding site. Nat Commun. 2016 Mar 4;710714. doi: 10.1038/ncomms10714. PubMed PMID: 26940118; PMCID: PMC4785225.
Bowen CD, Renner DW, Shreve JT, Tafuri Y, Payne KM, Dix RD, Kinchington PR, Gatherer D, Szpara ML. Viral forensic genomics reveals the relatedness of classic herpes simplex virus strains KOS, KOS63, and KOS79. Virology. 2016 May;492179-86. doi: 10.1016/j.virol.2016.02.013. PubMed PMID: 26950505; PMCID: PMC5056906.
Morosky S, Lennemann NJ, Coyne CB. BPIFB6 Regulates Secretory Pathway Trafficking and Enterovirus Replication. J Virol. 2016 May 15;90(10):5098-107. doi: 10.1128/JVI.00170-16. PubMed PMID: 26962226; PMCID: PMC4859712.
McConkey CA, Delorme-Axford E, Nickerson CA, Kim KS, Sadovsky Y, Boyle JP, Coyne CB. A three-dimensional culture system recapitulates placental syncytiotrophoblast development and microbial resistance. Sci Adv. 2016 Mar;2(3):e1501462. doi: 10.1126/sciadv.1501462. PubMed PMID: 26973875; PMCID: PMC4783126.
McCormick KD, Ghosh A, Trivedi S, Wang L, Coyne CB, Ferris RL, Sarkar SN. Innate immune signaling through differential RIPK1 expression promote tumor progression in head and neck squamous cell carcinoma. Carcinogenesis. 2016 May;37(5):522-9. doi: 10.1093/carcin/bgw032. PubMed PMID: 26992898; PMCID: PMC6086476.
Krzysiak TC, Chen BB, Lear T, Mallampalli RK, Gronenborn AM. Crystal structure and interaction studies of the human FBxo3 ApaG domain. FEBS J. 2016 Jun;283(11):2091-101. doi: 10.1111/febs.13721. PubMed PMID: 27010866; PMCID: PMC5065005.
Cuevas RA, Ghosh A, Wallerath C, Hornung V, Coyne CB, Sarkar SN. MOV10 Provides Antiviral Activity against RNA Viruses by Enhancing RIG-I-MAVS-Independent IFN Induction. J Immunol. 2016 May 1;196(9):3877-86. doi: 10.4049/jimmunol.1501359. PubMed PMID: 27016603; PMCID: PMC4868630.
Toptan T, Yousem SA, Ho J, Matsushima Y, Stabile LP, Fernández-Figueras MT, Bhargava R, Ryo A, Moore PS, Chang Y. Survey for human polyomaviruses in cancer. JCI Insight. 2016 Feb;1(2): doi: 10.1172/jci.insight.85562. PubMed PMID: 27034991; PMCID: PMC4811373.
Wales TE, Poe JA, Emert-Sedlak L, Morgan CR, Smithgall TE, Engen JR. Hydrogen Exchange Mass Spectrometry of Related Proteins with Divergent Sequences: A Comparative Study of HIV-1 Nef Allelic Variants. J Am Soc Mass Spectrom. 2016 Jun;27(6):1048-61. doi: 10.1007/s13361-016-1365-5. PubMed PMID: 27032648; PMCID: PMC4865444.
Perilla JR, Gronenborn AM. Molecular Architecture of the Retroviral Capsid. Trends Biochem Sci. 2016 May;41(5):410-420. doi: 10.1016/j.tibs.2016.02.009. PubMed PMID: 27039020; PMCID: PMC4879823.
Li W, Jia X, Shen C, Zhang M, Xu J, Shang Y, Zhu K, Hu M, Yan Q, Qin D, Lee MS, Zhu J, Lu H, Krueger BJ, Renne R, Gao SJ, Lu C. A KSHV microRNA enhances viral latency and induces angiogenesis by targeting GRK2 to activate the CXCR2/AKT pathway. Oncotarget. 2016 May 31;7(22):32286-305. doi: 10.18632/oncotarget.8591. PubMed PMID: 27058419; PMCID: PMC5078013.
Bissel SJ, Kofler J, Nyaundi J, Murphey-Corb M, Wisniewski SR, Wiley CA. Cerebrospinal Fluid Biomarkers of Simian Immunodeficiency Virus Encephalitis : CSF Biomarkers of SIV Encephalitis. J Neuroimmune Pharmacol. 2016 Jun;11(2):332-47. doi: 10.1007/s11481-016-9666-9. PubMed PMID: 27059917; PMCID: PMC4871628.
Bayer A, Lennemann NJ, Ouyang Y, Bramley JC, Morosky S, Marques ET Jr, Cherry S, Sadovsky Y, Coyne CB. Type III Interferons Produced by Human Placental Trophoblasts Confer Protection against Zika Virus Infection. Cell Host Microbe. 2016 May 11;19(5):705-12. doi: 10.1016/j.chom.2016.03.008. PubMed PMID: 27066743; PMCID: PMC4866896.
Buck CB, Van Doorslaer K, Peretti A, Geoghegan EM, Tisza MJ, An P, Katz JP, Pipas JM, McBride AA, Camus AC, McDermott AJ, Dill JA, Delwart E, Ng TF, Farkas K, Austin C, Kraberger S, Davison W, Pastrana DV, Varsani A. The Ancient Evolutionary History of Polyomaviruses. PLoS Pathog. 2016 Apr;12(4):e1005574. doi: 10.1371/journal.ppat.1005574. PubMed PMID: 27093155; PMCID: PMC4836724.
Coyne CB. The Tree(s) of Life: The Human Placenta and My Journey to Learn More about It. PLoS Pathog. 2016 Apr;12(4):e1005515. doi: 10.1371/journal.ppat.1005515. PubMed PMID: 27100178; PMCID: PMC4839627.
Huet A, Makhov AM, Huffman JB, Vos M, Homa FL, Conway JF. Extensive subunit contacts underpin herpesvirus capsid stability and interior-to-exterior allostery. Nat Struct Mol Biol. 2016 Jun;23(6):531-9. doi: 10.1038/nsmb.3212. PubMed PMID: 27111889; PMCID: PMC4899274.
Stevenson HP, Lin G, Barnes CO, Sutkeviciute I, Krzysiak T, Weiss SC, Reynolds S, Wu Y, Nagarajan V, Makhov AM, Lawrence R, Lamm E, Clark L, Gardella TJ, Hogue BG, Ogata CM, Ahn J, Gronenborn AM, Conway JF, Vilardaga JP, Cohen AE, Calero G. Transmission electron microscopy for the evaluation and optimization of crystal growth. Acta Crystallogr D Struct Biol. 2016 May;72(Pt 5):603-15. doi: 10.1107/S2059798316001546. PubMed PMID: 27139624; PMCID: PMC4854312.
Sankapal S, Gupta P, Ratner D, Ding M, Shen C, Sanyal A, Stolz D, Cu-Uvin S, Ramratnam B, Chen Y. HIV Exposure to the Epithelia in Ectocervical and Colon Tissues Induces Inflammatory Cytokines Without Tight Junction Disruption. AIDS Res Hum Retroviruses. 2016 Oct/Nov;32(10-11):1054-1066. doi: 10.1089/AID.2015.0185. PubMed PMID: 27153934; PMCID: PMC5067867.
Sharaf NG, Ishima R, Gronenborn AM. Conformational Plasticity of the NNRTI-Binding Pocket in HIV-1 Reverse Transcriptase: A Fluorine Nuclear Magnetic Resonance Study. Biochemistry. 2016 Jul 19;55(28):3864-73. doi: 10.1021/acs.biochem.6b00113. PubMed PMID: 27163463; PMCID: PMC4955860.
Badger J, Grover P, Shi H, Panjarian SB, Engen JR, Smithgall TE, Makowski L. c-Abl Tyrosine Kinase Adopts Multiple Active Conformational States in Solution. Biochemistry. 2016 Jun 14;55(23):3251-60. doi: 10.1021/acs.biochem.6b00202. PubMed PMID: 27166638; PMCID: PMC4910136.
Gearhart TL, Montelaro RC, Schurdak ME, Pilcher CD, Rinaldo CR, Kodadek T, Park Y, Islam K, Yurko R, Marques ET Jr, Burke DS. Selection of a potential diagnostic biomarker for HIV infection from a random library of non-biological synthetic peptoid oligomers. J Immunol Methods. 2016 Aug;43585-9. doi: 10.1016/j.jim.2016.05.001. PubMed PMID: 27182050; PMCID: PMC4947968.
Wong TM, Petrovsky N, Bissel SJ, Wiley CA, Ross TM. Delta inulin-derived adjuvants that elicit Th1 phenotype following vaccination reduces respiratory syncytial virus lung titers without a reduction in lung immunopathology. Hum Vaccin Immunother. 2016 Aug 2;12(8):2096-2105. doi: 10.1080/21645515.2016.1162931. PubMed PMID: 27215855; PMCID: PMC4994749.
Mirvish ED, Shuda M. Strategies for Human Tumor Virus Discoveries: From Microscopic Observation to Digital Transcriptome Subtraction. Front Microbiol. 2016;7676. doi: 10.3389/fmicb.2016.00676. PubMed PMID: 27242703; PMCID: PMC4865503.
Smith KN, Mailliard RB, Piazza PA, Fischer W, Korber BT, Fecek RJ, Ratner D, Gupta P, Mullins JI, Rinaldo CR. Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells. MBio. 2016 May 31;7(3): doi: 10.1128/mBio.00473-16. PubMed PMID: 27247230; PMCID: PMC4895106.
McKay HS, Bream JH, Margolick JB, Martínez-Maza O, Phair JP, Rinaldo CR, Abraham AG, Jacobson LP. Host factors associated with serologic inflammatory markers assessed using multiplex assays. Cytokine. 2016 Sep;8571-9. doi: 10.1016/j.cyto.2016.05.016. PubMed PMID: 27295613; PMCID: PMC5088708.
Drummond CG, Nickerson CA, Coyne CB. A Three-Dimensional Cell Culture Model To Study Enterovirus Infection of Polarized Intestinal Epithelial Cells. mSphere. 2016 Jan-Feb;1(1): doi: 10.1128/mSphere.00030-15. PubMed PMID: 27303677; PMCID: PMC4863623.
Taylor TJ, Diaz F, Colgrove RC, Bernard KA, DeLuca NA, Whelan SPJ, Knipe DM. Production of immunogenic West Nile virus-like particles using a herpes simplex virus 1 recombinant vector. Virology. 2016 Sep;496186-193. doi: 10.1016/j.virol.2016.06.006. PubMed PMID: 27336950; PMCID: PMC4969163.
Olagnier D, Muscolini M, Coyne CB, Diamond MS, Hiscott J. Mechanisms of Zika Virus Infection and Neuropathogenesis. DNA Cell Biol. 2016 Aug;35(8):367-72. doi: 10.1089/dna.2016.3404. PubMed PMID: 27348136; PMCID: PMC4971419.
Reinhart B, Goins WF, Harel A, Chaudhry S, Goss JR, Yoshimura N, de Groat WC, Cohen JB, Glorioso JC. An HSV-based library screen identifies PP1α as a negative TRPV1 regulator with analgesic activity in models of pain. Mol Ther Methods Clin Dev. 2016;316040. doi: 10.1038/mtm.2016.40. PubMed PMID: 27382601; PMCID: PMC4916946.
Debiec KT, Cerutti DS, Baker LR, Gronenborn AM, Case DA, Chong LT. Further along the Road Less Traveled: AMBER ff15ipq, an Original Protein Force Field Built on a Self-Consistent Physical Model. J Chem Theory Comput. 2016 Aug 9;12(8):3926-47. doi: 10.1021/acs.jctc.6b00567. PubMed PMID: 27399642; PMCID: PMC4980686.
Velásquez C, Cheng E, Shuda M, Lee-Oesterreich PJ, Pogge von Strandmann L, Gritsenko MA, Jacobs JM, Moore PS, Chang Y. Mitotic protein kinase CDK1 phosphorylation of mRNA translation regulator 4E-BP1 Ser83 may contribute to cell transformation. Proc Natl Acad Sci U S A. 2016 Jul 26;113(30):8466-71. doi: 10.1073/pnas.1607768113. PubMed PMID: 27402756; PMCID: PMC4968757.
Matei E, Basu R, Furey W, Shi J, Calnan C, Aiken C, Gronenborn AM. Structure and Glycan Binding of a New Cyanovirin-N Homolog. J Biol Chem. 2016 Sep 2;291(36):18967-76. doi: 10.1074/jbc.M116.740415. PubMed PMID: 27402833; PMCID: PMC5009269.
Smith KN, Mailliard RB, Piazza PA, Fischer W, Korber BT, Fecek RJ, Ratner D, Gupta P, Mullins JI, Rinaldo CR. Erratum for Smith et al., Effective Cytotoxic T Lymphocyte Targeting of Persistent HIV-1 during Antiretroviral Therapy Requires Priming of Naive CD8+ T Cells. MBio. 2016 Jul 12;7(4): doi: 10.1128/mBio.01012-16. PubMed PMID: 27406569; PMCID: PMC4958262.
Adibi JJ, Zhao Y, Cartus AR, Gupta P, Davidson LA. Placental Mechanics in the Zika-Microcephaly Relationship. Cell Host Microbe. 2016 Jul 13;20(1):9-11. doi: 10.1016/j.chom.2016.06.013. PubMed PMID: 27414496.
Laemmle LL, Cohen JB, Glorioso JC. Constitutive Expression of GATA4 Dramatically Increases the Cardiogenic Potential of D3 Mouse Embryonic Stem Cells. Open Biotechnol J. 2016;10248-257. doi: 10.2174/1874070701610010248. PubMed PMID: 27441042; PMCID: PMC4948750.
Organtini LJ, Lee H, Iketani S, Huang K, Ashley RE, Makhov AM, Conway JF, Parrish CR, Hafenstein S. Near-Atomic Resolution Structure of a Highly Neutralizing Fab Bound to Canine Parvovirus. J Virol. 2016 Nov 1;90(21):9733-9742. doi: 10.1128/JVI.01112-16. PubMed PMID: 27535057; PMCID: PMC5068525.
Kessler MC, Jackson E, Newsome JT. Response to Protocol Review Scenario: Loose lips can sink ships-and potentially careers and institutions. Lab Anim (NY). 2016 Aug 23;45(9):328-9. doi: 10.1038/laban.1089. PubMed PMID: 27551799.
Wu Y, Zhou X, Barnes CO, DeLucia M, Cohen AE, Gronenborn AM, Ahn J, Calero G. The DDB1-DCAF1-Vpr-UNG2 crystal structure reveals how HIV-1 Vpr steers human UNG2 toward destruction. Nat Struct Mol Biol. 2016 Oct;23(10):933-940. doi: 10.1038/nsmb.3284. PubMed PMID: 27571178; PMCID: PMC5385928.
Lee H, Shingler KL, Organtini LJ, Ashley RE, Makhov AM, Conway JF, Hafenstein S. The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs. Sci Adv. 2016 Aug;2(8):e1501929. doi: 10.1126/sciadv.1501929. PubMed PMID: 27574701; PMCID: PMC4996645.
Coyne CB, Lazear HM. Zika virus - reigniting the TORCH. Nat Rev Microbiol. 2016 Nov;14(11):707-715. doi: 10.1038/nrmicro.2016.125. PubMed PMID: 27573577.
Goins WF, Hall B, Cohen JB, Glorioso JC. Retargeting of herpes simplex virus (HSV) vectors. Curr Opin Virol. 2016 Dec;2193-101. doi: 10.1016/j.coviro.2016.08.007. PubMed PMID: 27614209; PMCID: PMC5138136.
McKay HS, Bream JH, Margolick JB, Martínez-Maza O, Magpantay LI, Phair JP, Rinaldo CR, Abraham AG, Jacobson LP. Data on serologic inflammatory biomarkers assessed using multiplex assays and host characteristics in the Multicenter AIDS Cohort Study (MACS). Data Brief. 2016 Dec;9262-70. doi: 10.1016/j.dib.2016.08.019. PubMed PMID: 27668272; PMCID: PMC5024314.
Zhang H, Hou G, Lu M, Ahn J, Byeon IL, Langmead CJ, Perilla JR, Hung I, Gor'kov PL, Gan Z, Brey WW, Case DA, Schulten K, Gronenborn AM, Polenova T. HIV-1 Capsid Function Is Regulated by Dynamics: Quantitative Atomic-Resolution Insights by Integrating Magic-Angle-Spinning NMR, QM/MM, and MD. J Am Chem Soc. 2016 Oct 26;138(42):14066-14075. doi: 10.1021/jacs.6b08744. PubMed PMID: 27701859; PMCID: PMC5380593.
Kim E, Erdos G, Huang S, Kenniston T, Falo LD Jr, Gambotto A. Preventative Vaccines for Zika Virus Outbreak: Preliminary Evaluation. EBioMedicine. 2016 Nov;13315-320. doi: 10.1016/j.ebiom.2016.09.028. PubMed PMID: 27717627; PMCID: PMC5264651.
Wiley CA, Bissel SJ, Lesniak A, Dixon CE, Franks J, Beer Stolz D, Sun M, Wang G, Switzer R, Kochanek PM, Murdoch G. Ultrastructure of Diaschisis Lesions after Traumatic Brain Injury. J Neurotrauma. 2016 Oct 15;33(20):1866-1882. doi: 10.1089/neu.2015.4272. PubMed PMID: 26914973; PMCID: PMC5079449.
Ouyang Y, Bayer A, Chu T, Tyurin VA, Kagan VE, Morelli AE, Coyne CB, Sadovsky Y. Isolation of human trophoblastic extracellular vesicles and characterization of their cargo and antiviral activity. Placenta. 2016 Nov;4786-95. doi: 10.1016/j.placenta.2016.09.008. PubMed PMID: 27780544; PMCID: PMC5123854.
Okubo Y, Uchida H, Wakata A, Suzuki T, Shibata T, Ikeda H, Yamaguchi M, Cohen JB, Glorioso JC, Tagaya M, Hamada H, Tahara H. Syncytial Mutations Do Not Impair the Specificity of Entry and Spread of a Glycoprotein D Receptor-Retargeted Herpes Simplex Virus. J Virol. 2016 Dec 15;90(24):11096-11105. doi: 10.1128/JVI.01456-16. PubMed PMID: 27707922; PMCID: PMC5126368.
Organtini LJ, Shingler KL, Ashley RE, Capaldi EA, Durrani K, Dryden KA, Makhov AM, Conway JF, Pizzorno MC, Hafenstein S. Honey Bee Deformed Wing Virus Structures Reveal that Conformational Changes Accompany Genome Release. J Virol. 2017 Jan 15;91(2): doi: 10.1128/JVI.01795-16. PubMed PMID: 27852845; PMCID: PMC5215330.
Sharaf NG, Brereton AE, Byeon IL, Karplus PA, Gronenborn AM. NMR structure of the HIV-1 reverse transcriptase thumb subdomain. J Biomol NMR. 2016 Dec;66(4):273-280. doi: 10.1007/s10858-016-0077-2. PubMed PMID: 27858311; PMCID: PMC5218889.
Chen Y, Shen C, Guha D, Ding M, Kulich S, Ashimkhanova A, Rinaldo C, Seaberg E, Margolick JB, Stosor V, Martínez-Maza O, Gupta P. Identification of the transcripts associated with spontaneous HCV clearance in individuals co-infected with HIV and HCV. BMC Infect Dis. 2016 Nov 22;16(1):693. doi: 10.1186/s12879-016-2044-7. PubMed PMID: 27875997; PMCID: PMC5120459.
Bility MT, Nio K, Li F, McGivern DR, Lemon SM, Feeney ER, Chung RT, Su L. Chronic hepatitis C infection-induced liver fibrogenesis is associated with M2 macrophage activation. Sci Rep. 2016 Dec 21;639520. doi: 10.1038/srep39520. PubMed PMID: 28000758; PMCID: PMC5175173.
Fritz M, Quinn CM, Wang M, Hou G, Lu X, Koharudin LMI, Polenova T, Gronenborn AM. Toward Closing the Gap: Quantum Mechanical Calculations and Experimentally Measured Chemical Shifts of a Microcrystalline Lectin. J Phys Chem B. 2017 Apr 20;121(15):3574-3585. doi: 10.1021/acs.jpcb.6b09479. PubMed PMID: 28001418; PMCID: PMC5465307.
Venkatachari NJ, Jain S, Walker L, Bivalkar-Mehla S, Chattopadhyay A, Bar-Joseph Z, Rinaldo C, Ragin A, Seaberg E, Levine A, Becker J, Martin E, Sacktor N, Ayyavoo V. Transcriptome analyses identify key cellular factors associated with HIV-1-associated neuropathogenesis in infected men. AIDS. 2017 Mar 13;31(5):623-633. doi: 10.1097/QAD.0000000000001379. PubMed PMID: 28005686; PMCID: PMC5389669.
Rigatti LH, Toptan T, Newsome JT, Moore PS, Chang Y. Identification and Characterization of Novel Rat Polyomavirus 2 in a Colony of X-SCID Rats by P-PIT assay. mSphere. 2016 Nov-Dec;1(6): doi: 10.1128/mSphere.00334-16. PubMed PMID: 28028546; PMCID: PMC5177731.
Shu ST, Emert-Sedlak LA, Smithgall TE. Cell-based Fluorescence Complementation Reveals a Role for HIV-1 Nef Protein Dimerization in AP-2 Adaptor Recruitment and CD4 Co-receptor Down-regulation. J Biol Chem. 2017 Feb 17;292(7):2670-2678. doi: 10.1074/jbc.M116.770016. PubMed PMID: 28031466; PMCID: PMC5314165.
Starrett GJ, Marcelus C, Cantalupo PG, Katz JP, Cheng J, Akagi K, Thakuria M, Rabinowits G, Wang LC, Symer DE, Pipas JM, Harris RS, DeCaprio JA. Merkel Cell Polyomavirus Exhibits Dominant Control of the Tumor Genome and Transcriptome in Virus-Associated Merkel Cell Carcinoma. MBio. 2017 Jan 3;8(1): doi: 10.1128/mBio.02079-16. PubMed PMID: 28049147; PMCID: PMC5210499.
Wonderlich ER, Swan ZD, Bissel SJ, Hartman AL, Carney JP, O'Malley KJ, Obadan AO, Santos J, Walker R, Sturgeon TJ, Frye LJ Jr, Maiello P, Scanga CA, Bowling JD, Bouwer AL, Duangkhae PA, Wiley CA, Flynn JL, Wang J, Cole KS, Perez DR, Reed DS, Barratt-Boyes SM. Widespread Virus Replication in Alveoli Drives Acute Respiratory Distress Syndrome in Aerosolized H5N1 Influenza Infection of Macaques. J Immunol. 2017 Feb 15;198(4):1616-1626. doi: 10.4049/jimmunol.1601770. PubMed PMID: 28062701; PMCID: PMC5751439.
Rowe AM, Yun H, Treat BR, Kinchington PR, Hendricks RL. Subclinical Herpes Simplex Virus Type 1 Infections Provide Site-Specific Resistance to an Unrelated Pathogen. J Immunol. 2017 Feb 15;198(4):1706-1717. doi: 10.4049/jimmunol.1601310. PubMed PMID: 28062697; PMCID: PMC5815862.
Guan J, Bywaters SM, Brendle SA, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S. Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site. Structure. 2017 Feb 7;25(2):253-263. doi: 10.1016/j.str.2016.12.001. PubMed PMID: 28065506.
Baldridge MT, Lee S, Brown JJ, McAllister N, Urbanek K, Dermody TS, Nice TJ, Virgin HW. Expression of Ifnlr1 on Intestinal Epithelial Cells Is Critical to the Antiviral Effects of Interferon Lambda against Norovirus and Reovirus. J Virol. 2017 Apr 1;91(7): doi: 10.1128/JVI.02079-16. PubMed PMID: 28077655; PMCID: PMC5355594.
Ahmad A, Rinaldo CR. A novel anti-HIV immunotherapy to cure HIV. AIDS. 2017 Jan 28;31(3):447-449. doi: 10.1097/QAD.0000000000001331. PubMed PMID: 28079543.
Dembowski JA, Dremel SE, DeLuca NA. Replication-Coupled Recruitment of Viral and Cellular Factors to Herpes Simplex Virus Type 1 Replication Forks for the Maintenance and Expression of Viral Genomes. PLoS Pathog. 2017 Jan;13(1):e1006166. doi: 10.1371/journal.ppat.1006166. PubMed PMID: 28095497; PMCID: PMC5271410.
Rausch K, Hackett BA, Weinbren NL, Reeder SM, Sadovsky Y, Hunter CA, Schultz DC, Coyne CB, Cherry S. Screening Bioactives Reveals Nanchangmycin as a Broad Spectrum Antiviral Active against Zika Virus. Cell Rep. 2017 Jan 17;18(3):804-815. doi: 10.1016/j.celrep.2016.12.068. PubMed PMID: 28099856; PMCID: PMC5270376.
Moore PS, Chang Y. Common Commensal Cancer Viruses. PLoS Pathog. 2017 Jan;13(1):e1006078. doi: 10.1371/journal.ppat.1006078. PubMed PMID: 28103305; PMCID: PMC5245784.
Lennemann NJ, Coyne CB. Dengue and Zika viruses subvert reticulophagy by NS2B3-mediated cleavage of FAM134B. Autophagy. 2017 Feb;13(2):322-332. doi: 10.1080/15548627.2016.1265192. PubMed PMID: 28102736; PMCID: PMC5324851.
Cantalupo PG, Buck CB, Pipas JM. Complete Genome Sequence of a Polyomavirus Recovered from a Pomona Leaf-Nosed Bat (Hipposideros pomona) Metagenome Data Set. Genome Announc. 2017 Jan 19;5(3): doi: 10.1128/genomeA.01053-16. PubMed PMID: 28104645; PMCID: PMC5255915.
Zhou J, Qu Z, Sun F, Han L, Li L, Yan S, Stabile LP, Chen LF, Siegfried JM, Xiao G. Myeloid STAT3 Promotes Lung Tumorigenesis by Transforming Tumor Immunosurveillance into Tumor-Promoting Inflammation. Cancer Immunol Res. 2017 Mar;5(3):257-268. doi: 10.1158/2326-6066.CIR-16-0073. PubMed PMID: 28108629; PMCID: PMC5334370.
Lepone LM, Rappocciolo G, Piazza PA, Campbell DM, Jenkins FJ, Rinaldo CR. Regulatory T Cell Effect on CD8+ T Cell Responses to Human Herpesvirus 8 Infection and Development of Kaposi's Sarcoma. AIDS Res Hum Retroviruses. 2017 Jul;33(7):668-674. doi: 10.1089/AID.2016.0155. PubMed PMID: 28121161; PMCID: PMC5512339.
Drummond CG, Bolock AM, Ma C, Luke CJ, Good M, Coyne CB. Enteroviruses infect human enteroids and induce antiviral signaling in a cell lineage-specific manner. Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):1672-1677. doi: 10.1073/pnas.1617363114. PubMed PMID: 28137842; PMCID: PMC5320971.
Vernhes E, Renouard M, Gilquin B, Cuniasse P, Durand D, England P, Hoos S, Huet A, Conway JF, Glukhov A, Ksenzenko V, Jacquet E, Nhiri N, Zinn-Justin S, Boulanger P. High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid. Sci Rep. 2017 Feb 6;741662. doi: 10.1038/srep41662. PubMed PMID: 28165000; PMCID: PMC5292684.
Wu T, Huang J, Moore PJ, Little MS, Walton WG, Fellner RC, Alexis NE, Peter Di Y, Redinbo MR, Tilley SL, Tarran R. Identification of BPIFA1/SPLUNC1 as an epithelium-derived smooth muscle relaxing factor. Nat Commun. 2017 Feb 6;814118. doi: 10.1038/ncomms14118. PubMed PMID: 28165446; PMCID: PMC5303822.
Uchida H, Hamada H, Nakano K, Kwon H, Tahara H, Cohen JB, Glorioso JC. Oncolytic Herpes Simplex Virus Vectors Fully Retargeted to Tumor- Associated Antigens. Curr Cancer Drug Targets. 2018;18(2):162-170. doi: 10.2174/1568009617666170206105855. PubMed PMID: 28176649.
Perilla JR, Zhao G, Lu M, Ning J, Hou G, Byeon IL, Gronenborn AM, Polenova T, Zhang P. CryoEM Structure Refinement by Integrating NMR Chemical Shifts with Molecular Dynamics Simulations. J Phys Chem B. 2017 Apr 20;121(15):3853-3863. doi: 10.1021/acs.jpcb.6b13105. PubMed PMID: 28181439; PMCID: PMC5459578.
Tanaka M, Tashiro H, Omer B, Lapteva N, Ando J, Ngo M, Mehta B, Dotti G, Kinchington PR, Leen AM, Rossig C, Rooney CM. Vaccination Targeting Native Receptors to Enhance the Function and Proliferation of Chimeric Antigen Receptor (CAR)-Modified T Cells. Clin Cancer Res. 2017 Jul 15;23(14):3499-3509. doi: 10.1158/1078-0432.CCR-16-2138. PubMed PMID: 28183713; PMCID: PMC5511585.
Macatangay BJ, Yang M, Sun X, Morton J, De Gruttola V, Little S, Hogan C, Rinaldo CR, A5217 Team.. Brief Report: Changes in Levels of Inflammation After Antiretroviral Treatment During Early HIV Infection in AIDS Clinical Trials Group Study A5217. J Acquir Immune Defic Syndr. 2017 May 1;75(1):137-141. doi: 10.1097/QAI.0000000000001320. PubMed PMID: 28198712; PMCID: PMC5393630.
Tan R, Nakajima S, Wang Q, Sun H, Xue J, Wu J, Hellwig S, Zeng X, Yates NA, Smithgall TE, Lei M, Jiang Y, Levine AS, Su B, Lan L. Nek7 Protects Telomeres from Oxidative DNA Damage by Phosphorylation and Stabilization of TRF1. Mol Cell. 2017 Mar 2;65(5):818-831.e5. doi: 10.1016/j.molcel.2017.01.015. PubMed PMID: 28216227; PMCID: PMC5924698.
Xi Z, Whitley MJ, Gronenborn AM. Human βB2-Crystallin Forms a Face-en-Face Dimer in Solution: An Integrated NMR and SAXS Study. Structure. 2017 Mar 7;25(3):496-505. doi: 10.1016/j.str.2017.02.001. PubMed PMID: 28238532; PMCID: PMC5381515.
Hirsch AJ, Smith JL, Haese NN, Broeckel RM, Parkins CJ, Kreklywich C, DeFilippis VR, Denton M, Smith PP, Messer WB, Colgin LM, Ducore RM, Grigsby PL, Hennebold JD, Swanson T, Legasse AW, Axthelm MK, MacAllister R, Wiley CA, Nelson JA, Streblow DN. Zika Virus infection of rhesus macaques leads to viral persistence in multiple tissues. PLoS Pathog. 2017 Mar;13(3):e1006219. doi: 10.1371/journal.ppat.1006219. PubMed PMID: 28278237; PMCID: PMC5344528.
Chang G, Mouillet JF, Mishima T, Chu T, Sadovsky E, Coyne CB, Parks WT, Surti U, Sadovsky Y. Expression and trafficking of placental microRNAs at the feto-maternal interface. FASEB J. 2017 Jul;31(7):2760-2770. doi: 10.1096/fj.201601146R. PubMed PMID: 28289056; PMCID: PMC5471515.
Eaton HE, Kobayashi T, Dermody TS, Johnston RN, Jais PH, Shmulevitz M. African Swine Fever Virus NP868R Capping Enzyme Promotes Reovirus Rescue during Reverse Genetics by Promoting Reovirus Protein Expression, Virion Assembly, and RNA Incorporation into Infectious Virions. J Virol. 2017 Jun 1;91(11): doi: 10.1128/JVI.02416-16. PubMed PMID: 28298603; PMCID: PMC5432856.
Janssen CF, Maiello P, Wright MJ Jr, Kracinovsky KB, Newsome JT. Comparison of Atipamezole with Yohimbine for Antagonism of Xylazine in Mice Anesthetized with Ketamine and Xylazine. J Am Assoc Lab Anim Sci. 2017 Mar 1;56(2):142-147. PubMed PMID: 28315642; PMCID: PMC5361038.
Chimelli L, Melo ASO, Avvad-Portari E, Wiley CA, Camacho AHS, Lopes VS, Machado HN, Andrade CV, Dock DCA, Moreira ME, Tovar-Moll F, Oliveira-Szejnfeld PS, Carvalho ACG, Ugarte ON, Batista AGM, Amorim MMR, Melo FO, Ferreira TA, Marinho JRL, Azevedo GS, Leal JIBF, da Costa RFM, Rehen S, Arruda MB, Brindeiro RM, Delvechio R, Aguiar RS, Tanuri A. The spectrum of neuropathological changes associated with congenital Zika virus infection. Acta Neuropathol. 2017 Jun;133(6):983-999. doi: 10.1007/s00401-017-1699-5. PubMed PMID: 28332092.
Welch JL, Madison MN, Margolick JB, Galvin S, Gupta P, Martínez-Maza O, Dash C, Okeoma CM. Effect of prolonged freezing of semen on exosome recovery and biologic activity. Sci Rep. 2017 Mar 24;745034. doi: 10.1038/srep45034. PubMed PMID: 28338013; PMCID: PMC5364471.
Thomas DL, Manners J, Marker D, Mettenburg J, Murdoch G, Stevens B, Wang G, Wiley C. CD8-Positive T-Cell Leukoencephalitis With Astrocytopathy Clinically Presenting as Neuromyelitis Optica. J Neuropathol Exp Neurol. 2017 May 1;76(5):347-357. doi: 10.1093/jnen/nlx015. PubMed PMID: 28340257.
D'Aiuto L, Williamson K, Dimitrion P, McNulty J, Brown CE, Dokuburra CB, Nielsen AJ, Lin WJ, Piazza P, Schurdak ME, Wood J, Yolken RH, Kinchington PR, Bloom DC, Nimgaonkar VL. Comparison of three cell-based drug screening platforms for HSV-1 infection. Antiviral Res. 2017 Jun;142136-140. doi: 10.1016/j.antiviral.2017.03.016. PubMed PMID: 28342892; PMCID: PMC5525147.
Whitley MJ, Xi Z, Bartko JC, Jensen MR, Blackledge M, Gronenborn AM. A Combined NMR and SAXS Analysis of the Partially Folded Cataract-Associated V75D γD-Crystallin. Biophys J. 2017 Mar 28;112(6):1135-1146. doi: 10.1016/j.bpj.2017.02.010. PubMed PMID: 28355541; PMCID: PMC5376099.
Bouziat R, Hinterleitner R, Brown JJ, Stencel-Baerenwald JE, Ikizler M, Mayassi T, Meisel M, Kim SM, Discepolo V, Pruijssers AJ, Ernest JD, Iskarpatyoti JA, Costes LM, Lawrence I, Palanski BA, Varma M, Zurenski MA, Khomandiak S, McAllister N, Aravamudhan P, Boehme KW, Hu F, Samsom JN, Reinecker HC, Kupfer SS, Guandalini S, Semrad CE, Abadie V, Khosla C, Barreiro LB, Xavier RJ, Ng A, Dermody TS, Jabri B. Reovirus infection triggers inflammatory responses to dietary antigens and development of celiac disease. Science. 2017 Apr 7;356(6333):44-50. doi: 10.1126/science.aah5298. PubMed PMID: 28386004; PMCID: PMC5506690.
Nestor G, Anderson T, Oscarson S, Gronenborn AM. Exploiting Uniformly 13C-Labeled Carbohydrates for Probing Carbohydrate-Protein Interactions by NMR Spectroscopy. J Am Chem Soc. 2017 May 3;139(17):6210-6216. doi: 10.1021/jacs.7b01929. PubMed PMID: 28406013; PMCID: PMC5725960.
Gandhi RT, McMahon DK, Bosch RJ, Lalama CM, Cyktor JC, Macatangay BJ, Rinaldo CR, Riddler SA, Hogg E, Godfrey C, Collier AC, Eron JJ, Mellors JW, ACTG A5321 Team.. Levels of HIV-1 persistence on antiretroviral therapy are not associated with markers of inflammation or activation. PLoS Pathog. 2017 Apr;13(4):e1006285. doi: 10.1371/journal.ppat.1006285. PubMed PMID: 28426825; PMCID: PMC5398724.
Kwun HJ, Chang Y, Moore PS. Protein-mediated viral latency is a novel mechanism for Merkel cell polyomavirus persistence. Proc Natl Acad Sci U S A. 2017 May 16;114(20):E4040-E4047. doi: 10.1073/pnas.1703879114. PubMed PMID: 28461484; PMCID: PMC5441811.
Verlengia G, Miyagawa Y, Ingusci S, Cohen JB, Simonato M, Glorioso JC. Engineered HSV vector achieves safe long-term transgene expression in the central nervous system. Sci Rep. 2017 May 4;7(1):1507. doi: 10.1038/s41598-017-01635-1. PubMed PMID: 28473703; PMCID: PMC5431452.
Boatz JC, Whitley MJ, Li M, Gronenborn AM, van der Wel PCA. Cataract-associated P23T γD-crystallin retains a native-like fold in amorphous-looking aggregates formed at physiological pH. Nat Commun. 2017 May 5;815137. doi: 10.1038/ncomms15137. PubMed PMID: 28474685; PMCID: PMC5424181.
Dumont TMF, Mouillet JF, Bayer A, Gardner CL, Klimstra WB, Wolf DG, Yagel S, Balmir F, Binstock A, Sanfilippo JS, Coyne CB, Larkin JC, Sadovsky Y. The expression level of C19MC miRNAs in early pregnancy and in response to viral infection. Placenta. 2017 May;5323-29. doi: 10.1016/j.placenta.2017.03.011. PubMed PMID: 28487016; PMCID: PMC5506831.
Huffman JB, Daniel GR, Falck-Pedersen E, Huet A, Smith GA, Conway JF, Homa FL. The C Terminus of the Herpes Simplex Virus UL25 Protein Is Required for Release of Viral Genomes from Capsids Bound to Nuclear Pores. J Virol. 2017 Aug 1;91(15): doi: 10.1128/JVI.00641-17. PubMed PMID: 28490590; PMCID: PMC5512264.
Arora N, Sadovsky Y, Dermody TS, Coyne CB. Microbial Vertical Transmission during Human Pregnancy. Cell Host Microbe. 2017 May 10;21(5):561-567. doi: 10.1016/j.chom.2017.04.007. PubMed PMID: 28494237; PMCID: PMC6148370.
Wiley CA, Chimelli L. Human Zika and West Nile virus neurological infections: What is the difference? Neuropathology. 2017 Oct;37(5):393-397. doi: 10.1111/neup.12385. PubMed PMID: 28493351.
Heming JD, Conway JF, Homa FL. Herpesvirus Capsid Assembly and DNA Packaging. Adv Anat Embryol Cell Biol. 2017;223119-142. doi: 10.1007/978-3-319-53168-7_6. PubMed PMID: 28528442; PMCID: PMC5548147.
Kramer PR, Stinson C, Umorin M, Deng M, Rao M, Bellinger LL, Yee MB, Kinchington PR. Lateral thalamic control of nociceptive response after whisker pad injection of varicella zoster virus. Neuroscience. 2017 Jul 25;356207-216. doi: 10.1016/j.neuroscience.2017.05.030. PubMed PMID: 28549561; PMCID: PMC5516953.
Sanyal A, Mailliard RB, Rinaldo CR, Ratner D, Ding M, Chen Y, Zerbato JM, Giacobbi NS, Venkatachari NJ, Patterson BK, Chargin A, Sluis-Cremer N, Gupta P. Novel assay reveals a large, inducible, replication-competent HIV-1 reservoir in resting CD4+ T cells. Nat Med. 2017 Jul;23(7):885-889. doi: 10.1038/nm.4347. PubMed PMID: 28553933; PMCID: PMC5505781.
Fox HL, Dembowski JA, DeLuca NA. A Herpesviral Immediate Early Protein Promotes Transcription Elongation of Viral Transcripts. MBio. 2017 Jun 13;8(3): doi: 10.1128/mBio.00745-17. PubMed PMID: 28611249; PMCID: PMC5472187.
Bramley JC, Drummond CG, Lennemann NJ, Good CA, Kim KS, Coyne CB. A Three-Dimensional Cell Culture System To Model RNA Virus Infections at the Blood-Brain Barrier. mSphere. 2017 May-Jun;2(3): doi: 10.1128/mSphere.00206-17. PubMed PMID: 28656176; PMCID: PMC5480033.
Rappocciolo G, Jenkins F, Rinaldo CR. Comment on primary lymphocyte infection models for KSHV and its putative tumorigenesis mechanisms in B cell lymphomas (Journal of Microbiology 2017, 55(5): 319-329). J Microbiol. 2017 Jul;55(7):592-593. doi: 10.1007/s12275-017-0670-4. PubMed PMID: 28664522.
Miyagawa Y, Verlengia G, Reinhart B, Han F, Uchida H, Zucchini S, Goins WF, Simonato M, Cohen JB, Glorioso JC. Deletion of the Virion Host Shut-off Gene Enhances Neuronal-Selective Transgene Expression from an HSV Vector Lacking Functional IE Genes. Mol Ther Methods Clin Dev. 2017 Sep 15;679-90. doi: 10.1016/j.omtm.2017.06.001. PubMed PMID: 28702475; PMCID: PMC5493822.
Agudelo-Hernandez A, Chen Y, Bullotta A, Buchanan WG, Klamar-Blain CR, Borowski L, Riddler SA, Rinaldo CR, Macatangay BJC. Subclinical herpesvirus shedding among HIV-1-infected men on antiretroviral therapy. AIDS. 2017 Sep 24;31(15):2085-2094. doi: 10.1097/QAD.0000000000001602. PubMed PMID: 28723708; PMCID: PMC5626452.
Weir MC, Hellwig S, Tan L, Liu Y, Gray NS, Smithgall TE. Dual inhibition of Fes and Flt3 tyrosine kinases potently inhibits Flt3-ITD+ AML cell growth. PLoS One. 2017;12(7):e0181178. doi: 10.1371/journal.pone.0181178. PubMed PMID: 28727840; PMCID: PMC5519068.
Struppe J, Quinn CM, Lu M, Wang M, Hou G, Lu X, Kraus J, Andreas LB, Stanek J, Lalli D, Lesage A, Pintacuda G, Maas W, Gronenborn AM, Polenova T. Expanding the horizons for structural analysis of fully protonated protein assemblies by NMR spectroscopy at MAS frequencies above 100 kHz. Solid State Nucl Magn Reson. 2017 Oct;87117-125. doi: 10.1016/j.ssnmr.2017.07.001. PubMed PMID: 28732673; PMCID: PMC5824719.
Subramanian S, Organtini LJ, Grossman A, Domeier PP, Cifuente JO, Makhov AM, Conway JF, D'Abramo A Jr, Cotmore SF, Tattersall P, Hafenstein S. Cryo-EM maps reveal five-fold channel structures and their modification by gatekeeper mutations in the parvovirus minute virus of mice (MVM) capsid. Virology. 2017 Oct;510216-223. doi: 10.1016/j.virol.2017.07.015. PubMed PMID: 28750325; PMCID: PMC5601314.
Vicetti Miguel RD, Quispe Calla NE, Dixon D, Foster RA, Gambotto A, Pavelko SD, Hall-Stoodley L, Cherpes TL. IL-4-secreting eosinophils promote endometrial stromal cell proliferation and prevent Chlamydia-induced upper genital tract damage. Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):E6892-E6901. doi: 10.1073/pnas.1621253114. PubMed PMID: 28765368; PMCID: PMC5565408.
Rappocciolo G, Jais M, Piazza PA, DeLucia DC, Jenkins FJ, Rinaldo CR. Human Herpesvirus 8 Infects and Replicates in Langerhans Cells and Interstitial Dermal Dendritic Cells and Impairs Their Function. J Virol. 2017 Oct 15;91(20): doi: 10.1128/JVI.00909-17. PubMed PMID: 28768873; PMCID: PMC5625489.
Corry J, Arora N, Good CA, Sadovsky Y, Coyne CB. Organotypic models of type III interferon-mediated protection from Zika virus infections at the maternal-fetal interface. Proc Natl Acad Sci U S A. 2017 Aug 29;114(35):9433-9438. doi: 10.1073/pnas.1707513114. PubMed PMID: 28784796; PMCID: PMC5584447.
Advani G, Lim YC, Catimel B, Lio DSS, Ng NLY, Chüeh AC, Tran M, Anasir MI, Verkade H, Zhu HJ, Turk BE, Smithgall TE, Ang CS, Griffin M, Cheng HC. Csk-homologous kinase (Chk) is an efficient inhibitor of Src-family kinases but a poor catalyst of phosphorylation of their C-terminal regulatory tyrosine. Cell Commun Signal. 2017 Aug 7;15(1):29. doi: 10.1186/s12964-017-0186-x. PubMed PMID: 28784162; PMCID: PMC5547543.
Goswami R, Shair KHY, Gershburg E. Molecular diversity of IgG responses to Epstein-Barr virus proteins in asymptomatic Epstein-Barr virus carriers. J Gen Virol. 2017 Sep;98(9):2343-2350. doi: 10.1099/jgv.0.000891. PubMed PMID: 28795661.
Kwun HJ, Wendzicki JA, Shuda Y, Moore PS, Chang Y. Merkel cell polyomavirus small T antigen induces genome instability by E3 ubiquitin ligase targeting. Oncogene. 2017 Dec 7;36(49):6784-6792. doi: 10.1038/onc.2017.277. PubMed PMID: 28846109; PMCID: PMC5720911.
Yates CC, Rodrigues M, Nuschke A, Johnson ZI, Whaley D, Stolz D, Newsome J, Wells A. Multipotent stromal cells/mesenchymal stem cells and fibroblasts combine to minimize skin hypertrophic scarring. Stem Cell Res Ther. 2017 Sep 5;8(1):193. doi: 10.1186/s13287-017-0644-9. PubMed PMID: 28874184; PMCID: PMC5585998.
Mujib S, Saiyed A, Fadel S, Bozorgzad A, Aidarus N, Yue FY, Benko E, Kovacs C, Emert-Sedlak LA, Smithgall TE, Ostrowski MA. Pharmacologic HIV-1 Nef blockade promotes CD8 T cell-mediated elimination of latently HIV-1-infected cells in vitro. JCI Insight. 2017 Sep 7;2(17): doi: 10.1172/jci.insight.93684. PubMed PMID: 28878119; PMCID: PMC5621880.
Dembowski JA, Deluca NA. Purification of Viral DNA for the Identification of Associated Viral and Cellular Proteins. J Vis Exp. 2017 Aug 31;(126): doi: 10.3791/56374. PubMed PMID: 28892026; PMCID: PMC5614390.
Chang Y, Moore PS, Weiss RA. Human oncogenic viruses: nature and discovery. Philos Trans R Soc Lond B Biol Sci. 2017 Oct 19;372(1732): doi: 10.1098/rstb.2016.0264. PubMed PMID: 28893931; PMCID: PMC5597731.
Sharaf NG, Xi Z, Ishima R, Gronenborn AM. The HIV-1 p66 homodimeric RT exhibits different conformations in the binding-competent and -incompetent NNRTI site. Proteins. 2017 Dec;85(12):2191-2197. doi: 10.1002/prot.25383. PubMed PMID: 28905420; PMCID: PMC5751703.
Jagger BW, Miner JJ, Cao B, Arora N, Smith AM, Kovacs A, Mysorekar IU, Coyne CB, Diamond MS. Gestational Stage and IFN-λ Signaling Regulate ZIKV Infection In Utero. Cell Host Microbe. 2017 Sep 13;22(3):366-376.e3. doi: 10.1016/j.chom.2017.08.012. PubMed PMID: 28910635; PMCID: PMC5647680.
Lee N, Le Sage V, Nanni AV, Snyder DJ, Cooper VS, Lakdawala SS. Genome-wide analysis of influenza viral RNA and nucleoprotein association. Nucleic Acids Res. 2017 Sep 6;45(15):8968-8977. doi: 10.1093/nar/gkx584. PubMed PMID: 28911100; PMCID: PMC5587783.
Gupta P, Sanyal A, Mailliard RB. TZA: a novel assay for measuring the latent HIV-1 reservoir. Expert Rev Mol Diagn. 2017 Dec;17(12):1033-1035. doi: 10.1080/14737159.2017.1384315. PubMed PMID: 28937839; PMCID: PMC5821502.
Shimizu N, Doyal MF, Goins WF, Kadekawa K, Wada N, Kanai AJ, de Groat WC, Hirayama A, Uemura H, Glorioso JC, Yoshimura N. Morphological changes in different populations of bladder afferent neurons detected by herpes simplex virus (HSV) vectors with cell-type-specific promoters in mice with spinal cord injury. Neuroscience. 2017 Nov 19;364190-201. doi: 10.1016/j.neuroscience.2017.09.024. PubMed PMID: 28942324; PMCID: PMC5768486.
Gong T, Zhang W, Parniak MA, Graebing PW, Moncla B, Gupta P, Empey KM, Rohan LC. Preformulation and Vaginal Film Formulation Development of Microbicide Drug Candidate CSIC for HIV prevention. J Pharm Innov. 2017 Jun;12(2):142-154. doi: 10.1007/s12247-017-9274-0. PubMed PMID: 28983328; PMCID: PMC5624728.
Markus A, Golani L, Ojha NK, Borodiansky-Shteinberg T, Kinchington PR, Goldstein RS. Varicella-Zoster Virus Expresses Multiple Small Noncoding RNAs. J Virol. 2017 Dec 15;91(24): doi: 10.1128/JVI.01710-17. PubMed PMID: 29021397; PMCID: PMC5709583.
Hua J, Huet A, Lopez CA, Toropova K, Pope WH, Duda RL, Hendrix RW, Conway JF. Capsids and Genomes of Jumbo-Sized Bacteriophages Reveal the Evolutionary Reach of the HK97 Fold. MBio. 2017 Oct 17;8(5): doi: 10.1128/mBio.01579-17. PubMed PMID: 29042498; PMCID: PMC5646251.
Sun F, Xiao G, Qu Z. Isolation of Murine Alveolar Type II Epithelial Cells. Bio Protoc. 2017 May 20;7(10): doi: 10.21769/BioProtoc.2288. PubMed PMID: 29082286; PMCID: PMC5659635.
Sun F, Xiao G, Qu Z. Murine Bronchoalveolar Lavage. Bio Protoc. 2017 May 20;7(10): doi: 10.21769/BioProtoc.2287. PubMed PMID: 29082285; PMCID: PMC5659634.
Guo ZS, Liu Z, Sathaiah M, Wang J, Ravindranathan R, Kim E, Huang S, Kenniston TW, Bell JC, Zeh HJ 3rd, Butterfield LH, Gambotto A, Bartlett DL. Rapid Generation of Multiple Loci-Engineered Marker-free Poxvirus and Characterization of a Clinical-Grade Oncolytic Vaccinia Virus. Mol Ther Methods Clin Dev. 2017 Dec 15;7112-122. doi: 10.1016/j.omtm.2017.09.007. PubMed PMID: 29085848; PMCID: PMC5651493.
Kramer PR, Strand J, Stinson C, Bellinger LL, Kinchington PR, Yee MB, Umorin M, Peng YB. Role for the Ventral Posterior Medial/Posterior Lateral Thalamus and Anterior Cingulate Cortex in Affective/Motivation Pain Induced by Varicella Zoster Virus. Front Integr Neurosci. 2017;1127. doi: 10.3389/fnint.2017.00027. PubMed PMID: 29089872; PMCID: PMC5651084.
Cantalupo PG, Katz JP, Pipas JM. Viral sequences in human cancer. Virology. 2018 Jan 1;513208-216. doi: 10.1016/j.virol.2017.10.017. PubMed PMID: 29107929; PMCID: PMC5828528.
Caves EA, Butch RM, Cook SA, Wasil LR, Chen C, Di YP, Lee N, Shair KHY. Latent Membrane Protein 1 Is a Novel Determinant of Epstein-Barr Virus Genome Persistence and Reactivation. mSphere. 2017 Nov-Dec;2(6): doi: 10.1128/mSphereDirect.00453-17. PubMed PMID: 29134204; PMCID: PMC5677982.
Wang M, Quinn CM, Perilla JR, Zhang H, Shirra R Jr, Hou G, Byeon IJ, Suiter CL, Ablan S, Urano E, Nitz TJ, Aiken C, Freed EO, Zhang P, Schulten K, Gronenborn AM, Polenova T. Quenching protein dynamics interferes with HIV capsid maturation. Nat Commun. 2017 Nov 24;8(1):1779. doi: 10.1038/s41467-017-01856-y. PubMed PMID: 29176596; PMCID: PMC5701193.
Diamond MS, Coyne CB. Vaccines in 2017: Closing in on a Zika virus vaccine. Nat Rev Immunol. 2018 Feb;18(2):89-90. doi: 10.1038/nri.2017.132. PubMed PMID: 29199280.
Treat BR, Bidula SM, Ramachandran S, St Leger AJ, Hendricks RL, Kinchington PR. Influence of an immunodominant herpes simplex virus type 1 CD8+ T cell epitope on the target hierarchy and function of subdominant CD8+ T cells. PLoS Pathog. 2017 Dec;13(12):e1006732. doi: 10.1371/journal.ppat.1006732. PubMed PMID: 29206240; PMCID: PMC5736228.
Guan J, Bywaters SM, Brendle SA, Ashley RE, Makhov AM, Conway JF, Christensen ND, Hafenstein S. High-Resolution Structure Analysis of Antibody V5 and U4 Conformational Epitopes on Human Papillomavirus 16. Viruses. 2017 Dec 6;9(12): doi: 10.3390/v9120374. PubMed PMID: 29211035; PMCID: PMC5744149.
Nestor G, Anderson T, Oscarson S, Gronenborn AM. Direct Observation of Carbohydrate Hydroxyl Protons in Hydrogen Bonds with a Protein. J Am Chem Soc. 2018 Jan 10;140(1):339-345. doi: 10.1021/jacs.7b10595. PubMed PMID: 29227646.
Sharaf NG, Brereton AE, Byeon IL, Karplus PA, Gronenborn AM. Correction to: NMR structure of the HIV-1 reverse transcriptase thumb subdomain. J Biomol NMR. 2017 Dec;69(4):247. doi: 10.1007/s10858-017-0139-0. PubMed PMID: 29234947.
Moroco JA, Alvarado JJ, Staudt RP, Shi H, Wales TE, Smithgall TE, Engen JR. Remodeling of HIV-1 Nef Structure by Src-Family Kinase Binding. J Mol Biol. 2018 Feb 2;430(3):310-321. doi: 10.1016/j.jmb.2017.12.008. PubMed PMID: 29258818; PMCID: PMC5801098.
Bayer A, Lennemann NJ, Ouyang Y, Sadovsky E, Sheridan MA, Roberts RM, Coyne CB, Sadovsky Y. Chromosome 19 microRNAs exert antiviral activity independent from type III interferon signaling. Placenta. 2018 Jan;6133-38. doi: 10.1016/j.placenta.2017.11.004. PubMed PMID: 29277269; PMCID: PMC5745809.
Brothers KM, Kowalski RP, Tian S, Kinchington PR, Shanks RMQ. Bacteria induce autophagy in a human ocular surface cell line. Exp Eye Res. 2018 Mar;16812-18. doi: 10.1016/j.exer.2017.12.010. PubMed PMID: 29288646; PMCID: PMC5826873.
Yockey LJ, Jurado KA, Arora N, Millet A, Rakib T, Milano KM, Hastings AK, Fikrig E, Kong Y, Horvath TL, Weatherbee S, Kliman HJ, Coyne CB, Iwasaki A. Type I interferons instigate fetal demise after Zika virus infection. Sci Immunol. 2018 Jan 5;3(19): doi: 10.1126/sciimmunol.aao1680. PubMed PMID: 29305462; PMCID: PMC6049088.
Ander SE, Rudzki EN, Arora N, Sadovsky Y, Coyne CB, Boyle JP. Human Placental Syncytiotrophoblasts Restrict Toxoplasma gondii Attachment and Replication and Respond to Infection by Producing Immunomodulatory Chemokines. MBio. 2018 Jan 9;9(1): doi: 10.1128/mBio.01678-17. PubMed PMID: 29317509; PMCID: PMC5760739.
Chimelli L, Moura Pone S, Avvad-Portari E, Farias Meira Vasconcelos Z, Araújo Zin A, Prado Cunha D, Raposo Thompson N, Lopes Moreira ME, Wiley CA, da Silva Pone MV. Persistence of Zika Virus After Birth: Clinical, Virological, Neuroimaging, and Neuropathological Documentation in a 5-Month Infant With Congenital Zika Syndrome. J Neuropathol Exp Neurol. 2018 Mar 1;77(3):193-198. doi: 10.1093/jnen/nlx116. PubMed PMID: 29346650.
Johnson ME, Cantalupo PG, Pipas JM. Identification of Head and Neck Cancer Subtypes Based on Human Papillomavirus Presence and E2F-Regulated Gene Expression. mSphere. 2018 Jan-Feb;3(1): doi: 10.1128/mSphere.00580-17. PubMed PMID: 29359188; PMCID: PMC5760753.
Wu AG, Pruijssers AJ, Brown JJ, Stencel-Baerenwald JE, Sutherland DM, Iskarpatyoti JA, Dermody TS. Age-dependent susceptibility to reovirus encephalitis in mice is influenced by maturation of the type-I interferon response. Pediatr Res. 2018 May;83(5):1057-1066. doi: 10.1038/pr.2018.13. PubMed PMID: 29364865; PMCID: PMC5959747.
Platt DJ, Smith AM, Arora N, Diamond MS, Coyne CB, Miner JJ. Zika virus-related neurotropic flaviviruses infect human placental explants and cause fetal demise in mice. Sci Transl Med. 2018 Jan 31;10(426): doi: 10.1126/scitranslmed.aao7090. PubMed PMID: 29386359; PMCID: PMC6136894.
Jorgensen DR, Shaaban CE, Wiley CA, Gianaros PJ, Mettenburg J, Rosano C. A population neuroscience approach to the study of cerebral small vessel disease in midlife and late life: an invited review. Am J Physiol Heart Circ Physiol. 2018 Jun 1;314(6):H1117-H1136. doi: 10.1152/ajpheart.00535.2017. PubMed PMID: 29393657; PMCID: PMC6032084.
Bissel SJ, Gurnsey K, Jedema HP, Smith NF, Wang G, Bradberry CW, Wiley CA. Aged Chinese-origin rhesus macaques infected with SIV develop marked viremia in absence of clinical disease, inflammation or cognitive impairment. Retrovirology. 2018 Feb 1;15(1):17. doi: 10.1186/s12977-018-0400-y. PubMed PMID: 29391069; PMCID: PMC5796498.
Wu M, Alvarado JJ, Augelli-Szafran CE, Ptak RG, Smithgall TE. A single β-octyl glucoside molecule induces HIV-1 Nef dimer formation in the absence of partner protein binding. PLoS One. 2018;13(2):e0192512. doi: 10.1371/journal.pone.0192512. PubMed PMID: 29415006; PMCID: PMC5802939.
Delorme-Axford E, Abernathy E, Lennemann NJ, Bernard A, Ariosa A, Coyne CB, Kirkegaard K, Klionsky DJ. The exoribonuclease Xrn1 is a post-transcriptional negative regulator of autophagy. Autophagy. 2018;14(5):898-912. doi: 10.1080/15548627.2018.1441648. PubMed PMID: 29465287; PMCID: PMC6070002.
Chaudhary SC, Khalid S, Smethurst V, Monier D, Mobley J, Huet A, Conway JF, Napierala D. Proteomic profiling of extracellular vesicles released from vascular smooth muscle cells during initiation of phosphate-induced mineralization. Connect Tissue Res. 2018 Dec;59(sup1):55-61. doi: 10.1080/03008207.2018.1444759. PubMed PMID: 29471680; PMCID: PMC6414064.
Debiec KT, Whitley MJ, Koharudin LMI, Chong LT, Gronenborn AM. Integrating NMR, SAXS, and Atomistic Simulations: Structure and Dynamics of a Two-Domain Protein. Biophys J. 2018 Feb 27;114(4):839-855. doi: 10.1016/j.bpj.2018.01.001. PubMed PMID: 29490245; PMCID: PMC5985006.
Kraus J, Gupta R, Yehl J, Lu M, Case DA, Gronenborn AM, Akke M, Polenova T. Chemical Shifts of the Carbohydrate Binding Domain of Galectin-3 from Magic Angle Spinning NMR and Hybrid Quantum Mechanics/Molecular Mechanics Calculations. J Phys Chem B. 2018 Mar 22;122(11):2931-2939. doi: 10.1021/acs.jpcb.8b00853. PubMed PMID: 29498857; PMCID: PMC5892201.
Fox HL, Dembowski JA, DeLuca NA. Erratum for Fox et al., "A Herpesviral Immediate Early Protein Promotes Transcription Elongation of Viral Transcripts". MBio. 2018 Mar 6;9(2): doi: 10.1128/mBio.00255-18. PubMed PMID: 29511077; PMCID: PMC5844996.
Brown JJ, Short SP, Stencel-Baerenwald J, Urbanek K, Pruijssers AJ, McAllister N, Ikizler M, Taylor G, Aravamudhan P, Khomandiak S, Jabri B, Williams CS, Dermody TS. Reovirus-Induced Apoptosis in the Intestine Limits Establishment of Enteric Infection. J Virol. 2018 May 15;92(10): doi: 10.1128/JVI.02062-17. PubMed PMID: 29514905; PMCID: PMC5923068.
Shi J, Xiong R, Zhou T, Su P, Zhang X, Qiu X, Li H, Li S, Yu C, Wang B, Ding C, Smithgall TE, Zheng YH. HIV-1 Nef Antagonizes SERINC5 Restriction by Downregulation of SERINC5 via the Endosome/Lysosome System. J Virol. 2018 Jun 1;92(11): doi: 10.1128/JVI.00196-18. PubMed PMID: 29514909; PMCID: PMC5952139.
Gandhi M, Gandhi RT, Stefanescu A, Bosch RJ, Cyktor JC, Horng H, Louie A, Phung N, Eron JJ, Hogg E, Macatangay BJC, Hensel C, Fletcher CV, Mellors JW, McMahon DK, A5321 Team.. Cumulative Antiretroviral Exposure Measured in Hair Is Not Associated With Measures of HIV Persistence or Inflammation Among Individuals on Suppressive ART. J Infect Dis. 2018 Jun 20;218(2):234-238. doi: 10.1093/infdis/jiy011. PubMed PMID: 29529230; PMCID: PMC6009579.
Knowlton JJ, Fernández de Castro I, Ashbrook AW, Gestaut DR, Zamora PF, Bauer JA, Forrest JC, Frydman J, Risco C, Dermody TS. The TRiC chaperonin controls reovirus replication through outer-capsid folding. Nat Microbiol. 2018 Apr;3(4):481-493. doi: 10.1038/s41564-018-0122-x. PubMed PMID: 29531365; PMCID: PMC5874176.
Lanik WE, Mara MA, Mihi B, Coyne CB, Good M. Stem Cell-Derived Models of Viral Infections in the Gastrointestinal Tract. Viruses. 2018 Mar 10;10(3): doi: 10.3390/v10030124. PubMed PMID: 29534451; PMCID: PMC5869517.
Cantalupo PG, Pipas JM. Complete Genome Sequence of Pittsburgh Sewage-Associated Virus 1. Genome Announc. 2018 Mar 15;6(11): doi: 10.1128/genomeA.01460-17. PubMed PMID: 29545305; PMCID: PMC5854781.
Sutherland DM, Aravamudhan P, Dermody TS. An Orchestra of Reovirus Receptors: Still Searching for the Conductor. Adv Virus Res. 2018;100223-246. doi: 10.1016/bs.aivir.2017.10.005. PubMed PMID: 29551138.
Shair KHY, Reddy A, Cooper VS. New Insights from Elucidating the Role of LMP1 in Nasopharyngeal Carcinoma. Cancers (Basel). 2018 Mar 21;10(4): doi: 10.3390/cancers10040086. PubMed PMID: 29561768; PMCID: PMC5923341.
Paramasivam S, Gronenborn AM, Polenova T. Backbone amide 15N chemical shift tensors report on hydrogen bonding interactions in proteins: A magic angle spinning NMR study. Solid State Nucl Magn Reson. 2018 Aug;921-6. doi: 10.1016/j.ssnmr.2018.03.002. PubMed PMID: 29579703; PMCID: PMC6261280.
Benson CA, Andersen JW, Macatangay BJC, Mailliard RB, Rinaldo CR Jr, Read S, Bozzolo DR, Purdue L, Jennings C, Keefer MC, Glesby M, Tebas P, Russell AF, Martin J, Annunziato P, Popmihajlov Z, Lennox JL. Safety and Immunogenicity of Zoster Vaccine Live in Human Immunodeficiency Virus-Infected Adults With CD4+ Cell Counts >200 Cells/mL Virologically Suppressed on Antiretroviral Therapy. Clin Infect Dis. 2018 Nov 13;67(11):1712-1719. doi: 10.1093/cid/ciy242. PubMed PMID: 29590326; PMCID: PMC6233680.
DeLucia DC, Rinaldo CR, Rappocciolo G. Inefficient HIV-1 trans Infection of CD4+ T Cells by Macrophages from HIV-1 Nonprogressors Is Associated with Altered Membrane Cholesterol and DC-SIGN. J Virol. 2018 Jul 1;92(13): doi: 10.1128/JVI.00092-18. PubMed PMID: 29643243; PMCID: PMC6002718.
Velásquez C, Amako Y, Harold A, Toptan T, Chang Y, Shuda M. Characterization of a Merkel Cell Polyomavirus-Positive Merkel Cell Carcinoma Cell Line CVG-1. Front Microbiol. 2018;9713. doi: 10.3389/fmicb.2018.00713. PubMed PMID: 29696010; PMCID: PMC5905237.
Dietrich MH, Ogden KM, Long JM, Ebenhoch R, Thor A, Dermody TS, Stehle T. Structural and Functional Features of the Reovirus σ1 Tail. J Virol. 2018 Jul 15;92(14): doi: 10.1128/JVI.00336-18. PubMed PMID: 29695426; PMCID: PMC6026731.
Shimizu N, Doyal MF, Goins WF, Kadekawa K, Wada N, Kanai AJ, de Groat WC, Hirayama A, Uemura H, Glorioso JC, Yoshimura N. Corrigendum to 'Morphological Changes in Different Populations of Bladder Afferent Neurons Detected by Herpes Simplex Virus (HSV) Vectors with Cell-type-specific Promoters in Mice with Spinal Cord Injury' [Neuroscience 364 (2017) 190-201]. Neuroscience. 2018 Jun 15;381161. doi: 10.1016/j.neuroscience.2018.04.021. PubMed PMID: 29704500; PMCID: PMC5997183.
Moshayedi P, Thomas D, Rinaldo CR, Moossy JJ, Maroon JC, Murdoch GH, Hamilton RL, Homayoun H. Subacute histopathological features in a case of varicella zoster virus myelitis and post-herpetic neuralgia. Spinal Cord Ser Cases. 2018;433. doi: 10.1038/s41394-018-0068-5. PubMed PMID: 29707236; PMCID: PMC5884843.
Nachega JB, Sam-Agudu NA, Mofenson LM, Schechter M, Mellors JW. Reply to Kojima and Klausner. Clin Infect Dis. 2018 Oct 15;67(9):1469-1470. doi: 10.1093/cid/ciy345. PubMed PMID: 29718304; PMCID: PMC6186858.
Xu CL, Cantalupo PG, Sáenz-Robles MT, Baldwin A, Fitzpatrick D, Norris DE, Jackson E, Pipas JM. Draft Genome Sequence of a Novel Rhabdovirus Isolated from Deinocerites Mosquitoes. Genome Announc. 2018 May 10;6(19): doi: 10.1128/genomeA.01438-17. PubMed PMID: 29748415; PMCID: PMC5946037.
D'Aiuto L, Naciri J, Radio N, Tekur S, Clayton D, Apodaca G, Di Maio R, Zhi Y, Dimitrion P, Piazza P, Demers M, Wood J, Chu C, Callio J, McClain L, Yolken R, McNulty J, Kinchington P, Bloom D, Nimgaonkar V. Generation of three-dimensional human neuronal cultures: application to modeling CNS viral infections. Stem Cell Res Ther. 2018 May 11;9(1):134. doi: 10.1186/s13287-018-0881-6. PubMed PMID: 29751846; PMCID: PMC5948884.
Lu M, Sarkar S, Wang M, Kraus J, Fritz M, Quinn CM, Bai S, Holmes ST, Dybowski C, Yap GPA, Struppe J, Sergeyev IV, Maas W, Gronenborn AM, Polenova T. 19F Magic Angle Spinning NMR Spectroscopy and Density Functional Theory Calculations of Fluorosubstituted Tryptophans: Integrating Experiment and Theory for Accurate Determination of Chemical Shift Tensors. J Phys Chem B. 2018 Jun 14;122(23):6148-6155. doi: 10.1021/acs.jpcb.8b00377. PubMed PMID: 29756776; PMCID: PMC6203958.
Weir MC, Shu ST, Patel RK, Hellwig S, Chen L, Tan L, Gray NS, Smithgall TE. Selective Inhibition of the Myeloid Src-Family Kinase Fgr Potently Suppresses AML Cell Growth in Vitro and in Vivo. ACS Chem Biol. 2018 Jun 15;13(6):1551-1559. doi: 10.1021/acschembio.8b00154. PubMed PMID: 29763550; PMCID: PMC6130198.
Zamora PF, Hu L, Knowlton JJ, Lahr RM, Moreno RA, Berman AJ, Prasad BVV, Dermody TS. Reovirus Nonstructural Protein σNS Acts as an RNA Stability Factor Promoting Viral Genome Replication. J Virol. 2018 Aug 1;92(15): doi: 10.1128/JVI.00563-18. PubMed PMID: 29769334; PMCID: PMC6052290.
Li L, Han L, Sun F, Zhou J, Ohaegbulam KC, Tang X, Zang X, Steinbrecher KA, Qu Z, Xiao G. NF-κB RelA renders tumor-associated macrophages resistant to and capable of directly suppressing CD8+ T cells for tumor promotion. Oncoimmunology. 2018;7(6):e1435250. doi: 10.1080/2162402X.2018.1435250. PubMed PMID: 29872577; PMCID: PMC5980414.
Hong F, Jacobs JL, Aga E, Cillo AR, Fyne E, Koontz DL, Zheng L, Mellors JW. Associations between HIV-1 DNA copy number, proviral transcriptional activity, and plasma viremia in individuals off or on suppressive antiretroviral therapy. Virology. 2018 Aug;52151-57. doi: 10.1016/j.virol.2018.05.018. PubMed PMID: 29879542; PMCID: PMC6279608.
Han F, Miyagawa Y, Verlengia G, Ingusci S, Soukupova M, Simonato M, Glorioso JC, Cohen JB. Cellular Antisilencing Elements Support Transgene Expression from Herpes Simplex Virus Vectors in the Absence of Immediate Early Gene Expression. J Virol. 2018 Sep 1;92(17): doi: 10.1128/JVI.00536-18. PubMed PMID: 29950408; PMCID: PMC6096828.
Wasil LR, Shair KHY. Modified Anoikis Assay That Functionally Segregates Epstein-Barr Virus LMP1 Strains into Two Groups. J Virol. 2018 Sep 15;92(18): doi: 10.1128/JVI.00557-18. PubMed PMID: 29950426; PMCID: PMC6146687.
Rotem A, Serohijos AWR, Chang CB, Wolfe JT, Fischer AE, Mehoke TS, Zhang H, Tao Y, Lloyd Ung W, Choi JM, Rodrigues JV, Kolawole AO, Koehler SA, Wu S, Thielen PM, Cui N, Demirev PA, Giacobbi NS, Julian TR, Schwab K, Lin JS, Smith TJ, Pipas JM, Wobus CE, Feldman AB, Weitz DA, Shakhnovich EI. Evolution on the Biophysical Fitness Landscape of an RNA Virus. Mol Biol Evol. 2018 Oct 1;35(10):2390-2400. doi: 10.1093/molbev/msy131. PubMed PMID: 29955873; PMCID: PMC6188569.
Ruhge LL, Huet AGE, Conway JF, Smith GA. The Apical Region of the Herpes Simplex Virus Major Capsid Protein Promotes Capsid Maturation. J Virol. 2018 Sep 15;92(18): doi: 10.1128/JVI.00821-18. PubMed PMID: 29976665; PMCID: PMC6146679.
Yan Q, Zhao R, Shen C, Wang F, Li W, Gao SJ, Lu C. Upregulation of MicroRNA 711 Mediates HIV-1 Vpr Promotion of Kaposi's Sarcoma-Associated Herpesvirus Latency and Induction of Pro-proliferation and Pro-survival Cytokines by Targeting the Notch/NF-κB-Signaling Axis. J Virol. 2018 Sep 15;92(18): doi: 10.1128/JVI.00580-18. PubMed PMID: 29976660; PMCID: PMC6146700.
Dembowski JA, DeLuca NA. Temporal Viral Genome-Protein Interactions Define Distinct Stages of Productive Herpesviral Infection. MBio. 2018 Jul 17;9(4): doi: 10.1128/mBio.01182-18. PubMed PMID: 30018111; PMCID: PMC6050965.
Caves EA, Cook SA, Lee N, Stoltz D, Watkins S, Shair KHY. Air-Liquid Interface Method To Study Epstein-Barr Virus Pathogenesis in Nasopharyngeal Epithelial Cells. mSphere. 2018 Jul 18;3(4): doi: 10.1128/mSphere.00152-18. PubMed PMID: 30021875; PMCID: PMC6052337.
Gopal S, Perez E Jr, Xia AY, Knowlton JJ, Cerqueira F, Dermody TS, Upton JW. Murine cytomegalovirus M72 promotes acute virus replication in vivo and is a substrate of the TRiC/CCT complex. Virology. 2018 Sep;52292-105. doi: 10.1016/j.virol.2018.07.008. PubMed PMID: 30029015; PMCID: PMC6487667.
Namazi G, Fajnzylber JM, Aga E, Bosch RJ, Acosta EP, Sharaf R, Hartogensis W, Jacobson JM, Connick E, Volberding P, Skiest D, Margolis D, Sneller MC, Little SJ, Gianella S, Smith DM, Kuritzkes DR, Gulick RM, Mellors JW, Mehraj V, Gandhi RT, Mitsuyasu R, Schooley RT, Henry K, Tebas P, Deeks SG, Chun TW, Collier AC, Routy JP, Hecht FM, Walker BD, Li JZ. The Control of HIV After Antiretroviral Medication Pause (CHAMP) Study: Posttreatment Controllers Identified From 14 Clinical Studies. J Infect Dis. 2018 Nov 5;218(12):1954-1963. doi: 10.1093/infdis/jiy479. PubMed PMID: 30085241; PMCID: PMC6217727.
Tenorio R, Fernández de Castro I, Knowlton JJ, Zamora PF, Lee CH, Mainou BA, Dermody TS, Risco C. Reovirus σNS and μNS Proteins Remodel the Endoplasmic Reticulum to Build Replication Neo-Organelles. MBio. 2018 Aug 7;9(4): doi: 10.1128/mBio.01253-18. PubMed PMID: 30087167; PMCID: PMC6083906.
Coyne CB. STING'ing Zika virus in neurons. Nat Microbiol. 2018 Sep;3(9):975-976. doi: 10.1038/s41564-018-0232-5. PubMed PMID: 30104582.
Artusi S, Miyagawa Y, Goins WF, Cohen JB, Glorioso JC. Herpes Simplex Virus Vectors for Gene Transfer to the Central Nervous System. Diseases. 2018 Aug 14;6(3): doi: 10.3390/diseases6030074. PubMed PMID: 30110885; PMCID: PMC6164475.
Toptan T, Abere B, Nalesnik MA, Swerdlow SH, Ranganathan S, Lee N, Shair KH, Moore PS, Chang Y. Circular DNA tumor viruses make circular RNAs. Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):E8737-E8745. doi: 10.1073/pnas.1811728115. PubMed PMID: 30150410; PMCID: PMC6140489.
Nanni AV, Lee N. Identification of host RNAs that interact with EBV noncoding RNA EBER2. RNA Biol. 2018;15(9):1181-1191. doi: 10.1080/15476286.2018.1518854. PubMed PMID: 30176159; PMCID: PMC6284586.
Barrila J, Crabbé A, Yang J, Franco K, Nydam SD, Forsyth RJ, Davis RR, Gangaraju S, Ott CM, Coyne CB, Bissell MJ, Nickerson CA. Modeling Host-Pathogen Interactions in the Context of the Microenvironment: Three-Dimensional Cell Culture Comes of Age. Infect Immun. 2018 Nov;86(11): doi: 10.1128/IAI.00282-18. PubMed PMID: 30181350; PMCID: PMC6204695.
Tan B, Gao SJ. The RNA Epitranscriptome of DNA Viruses. J Virol. 2018 Nov 15;92(22): doi: 10.1128/JVI.00696-18. PubMed PMID: 30185592; PMCID: PMC6206477.
Ramos da Silva S, Cheng F, Huang IC, Jung JU, Gao SJ. Efficiencies and kinetics of infection in different cell types/lines by African and Asian strains of Zika virus. J Med Virol. 2019 Feb;91(2):179-189. doi: 10.1002/jmv.25306. PubMed PMID: 30192399; PMCID: PMC6294704.
Stansfield SE, Mittler JE, Gottlieb GS, Murphy JT, Hamilton DT, Detels R, Wolinsky SM, Jacobson LP, Margolick JB, Rinaldo CR, Herbeck JT, Goodreau SM. Sexual role and HIV-1 set point viral load among men who have sex with men. Epidemics. 2019 Mar;2668-76. doi: 10.1016/j.epidem.2018.08.006. PubMed PMID: 30193771; PMCID: PMC6538391.
Sutherland DM, Aravamudhan P, Dietrich MH, Stehle T, Dermody TS. Reovirus Neurotropism and Virulence Are Dictated by Sequences in the Head Domain of the Viral Attachment Protein. J Virol. 2018 Dec 1;92(23): doi: 10.1128/JVI.00974-18. PubMed PMID: 30209169; PMCID: PMC6232475.
Stram MN, Suciu CN, Seheult JN, McCullough MA, Kader M, Wells A, William Pasculle A, Rinaldo CR, Ismail N. Herpes Simplex Virus-1 qPCR in the Diagnosis of Lower Respiratory Tract Infections in Organ Transplant Recipients and Critically Ill Patients. Am J Clin Pathol. 2018 Oct 24;150(6):522-532. doi: 10.1093/ajcp/aqy088. PubMed PMID: 30212869.
Reilingh ML, Murawski CD, DiGiovanni CW, Dahmen J, Ferrao PNF, Lambers KTA, Ling JS, Tanaka Y, Kerkhoffs GMMJ, International Consensus Group on Cartilage Repair of the Ankle.. Fixation Techniques: Proceedings of the International Consensus Meeting on Cartilage Repair of the Ankle. Foot Ankle Int. 2018 Jul;39(1_suppl):23S-27S. doi: 10.1177/1071100718781096. PubMed PMID: 30215310.
Wells AI, Coyne CB. Type III Interferons in Antiviral Defenses at Barrier Surfaces. Trends Immunol. 2018 Oct;39(10):848-858. doi: 10.1016/j.it.2018.08.008. PubMed PMID: 30219309; PMCID: PMC6179363.
Wang M, Lu M, Fritz MP, Quinn CM, Byeon IL, Byeon CH, Struppe J, Maas W, Gronenborn AM, Polenova T. Fast Magic-Angle Spinning 19 F NMR Spectroscopy of HIV-1 Capsid Protein Assemblies. Angew Chem Int Ed Engl. 2018 Dec 10;57(50):16375-16379. doi: 10.1002/anie.201809060. PubMed PMID: 30225969; PMCID: PMC6279522.
Brown JJ, Jabri B, Dermody TS. A viral trigger for celiac disease. PLoS Pathog. 2018 Sep;14(9):e1007181. doi: 10.1371/journal.ppat.1007181. PubMed PMID: 30235320; PMCID: PMC6147651.
Le Sage V, Nanni AV, Bhagwat AR, Snyder DJ, Cooper VS, Lakdawala SS, Lee N. Non-Uniform and Non-Random Binding of Nucleoprotein to Influenza A and B Viral RNA. Viruses. 2018 Sep 25;10(10): doi: 10.3390/v10100522. PubMed PMID: 30257455; PMCID: PMC6213415.
DiMaio D, Dermody TS, Enquist LW. Reductio ad Intellectum. Annu Rev Virol. 2018 Sep 29;5(1):ii-iv. doi: 10.1146/annurev-vi-05-072618-100011. PubMed PMID: 30265630.
Coyne CB. Horsepox: Framing a dual use research of concern debate. PLoS Pathog. 2018 Oct;14(10):e1007344. doi: 10.1371/journal.ppat.1007344. PubMed PMID: 30286197; PMCID: PMC6171939.
Harms PW, Harms KL, Moore PS, DeCaprio JA, Nghiem P, Wong MKK, Brownell I, International Workshop on Merkel Cell Carcinoma Research (IWMCC) Working Group.. The biology and treatment of Merkel cell carcinoma: current understanding and research priorities. Nat Rev Clin Oncol. 2018 Dec;15(12):763-776. doi: 10.1038/s41571-018-0103-2. PubMed PMID: 30287935; PMCID: PMC6319370.
Wallis CL, Godfrey C, Fitzgibbon JE, Mellors JW. Reply to Suthar et al. J Infect Dis. 2019 Jan 29;219(4):673-674. doi: 10.1093/infdis/jiy558. PubMed PMID: 30307562.
Freeman MC, Coyne CB, Green M, Williams JV, Silva LA. Emerging arboviruses and implications for pediatric transplantation: A review. Pediatr Transplant. 2019 Feb;23(1):e13303. doi: 10.1111/petr.13303. PubMed PMID: 30338634.
Quinn CM, Wang M, Fritz MP, Runge B, Ahn J, Xu C, Perilla JR, Gronenborn AM, Polenova T. Dynamic regulation of HIV-1 capsid interaction with the restriction factor TRIM5α identified by magic-angle spinning NMR and molecular dynamics simulations. Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):11519-11524. doi: 10.1073/pnas.1800796115. PubMed PMID: 30333189; PMCID: PMC6233135.
Riddler SA, Balkus JE, Parikh UM, Mellors JW, Akello C, Dadabhai S, Mhlanga F, Ramjee G, Mayo AJ, Livant E, Heaps AL, O'Rourke C, Baeten JM, MTN-015., MTN-020/ASPIRE Study Teams.. Clinical and Virologic Outcomes Following Initiation of Antiretroviral Therapy Among Seroconverters in the MTN-020/ASPIRE Phase III Trial of the Dapivirine Vaginal Ring. Clin Infect Dis. 2018 Oct 22; doi: 10.1093/cid/ciy909. PubMed PMID: 30346511.
Shen K, Moroco JA, Patel RK, Shi H, Engen JR, Dorman HR, Smithgall TE. The Src family kinase Fgr is a transforming oncoprotein that functions independently of SH3-SH2 domain regulation. Sci Signal. 2018 Oct 23;11(553): doi: 10.1126/scisignal.aat5916. PubMed PMID: 30352950.
Riddler SA, Zheng L, Durand CM, Ritz J, Koup RA, Ledgerwood J, Bailer RT, Koletar SL, Eron JJ, Keefer MC, Macatangay BJC, Cyktor JC, Mellors JW, AIDS Clinical Trials Group A5342 Protocol Team .. Randomized Clinical Trial to Assess the Impact of the Broadly Neutralizing HIV-1 Monoclonal Antibody VRC01 on HIV-1 Persistence in Individuals on Effective ART. Open Forum Infect Dis. 2018 Oct;5(10):ofy242. doi: 10.1093/ofid/ofy242. PubMed PMID: 30364428; PMCID: PMC6195652.
Kramer P, Rao M, Stinson C, Bellinger LL, Kinchington PR, Yee MB. Aromatase Derived Estradiol Within the Thalamus Modulates Pain Induced by Varicella Zoster Virus. Front Integr Neurosci. 2018;1246. doi: 10.3389/fnint.2018.00046. PubMed PMID: 30369871; PMCID: PMC6194186.
Bouziat R, Biering SB, Kouame E, Sangani KA, Kang S, Ernest JD, Varma M, Brown JJ, Urbanek K, Dermody TS, Ng A, Hinterleitner R, Hwang S, Jabri B. Murine Norovirus Infection Induces TH1 Inflammatory Responses to Dietary Antigens. Cell Host Microbe. 2018 Nov 14;24(5):677-688.e5. doi: 10.1016/j.chom.2018.10.004. PubMed PMID: 30392830; PMCID: PMC6326098.
Gao R, Li T, Tan B, Ramos da Silva S, Jung JU, Feng P, Gao SJ. FoxO1 Suppresses Kaposi's Sarcoma-Associated Herpesvirus Lytic Replication and Controls Viral Latency. J Virol. 2019 Feb 1;93(3): doi: 10.1128/JVI.01681-18. PubMed PMID: 30404794; PMCID: PMC6340022.
D'Aiuto L, McNulty J, Hartline C, Demers M, Kalkeri R, Wood J, McClain L, Chattopadhyay A, Zhi Y, Naciri J, Smith A, Yolken R, Chowdari K, Zepeda-Velazquez C, Dokuburra CB, Marques E, Ptak R, Kinchington P, Watkins S, Prichard M, Bloom D, Nimgaonkar V. R430: A potent inhibitor of DNA and RNA viruses. Sci Rep. 2018 Nov 9;8(1):16662. doi: 10.1038/s41598-018-33904-y. PubMed PMID: 30413769; PMCID: PMC6226428.
Krzysiak TC, Thomas L, Choi YJ, Auclair S, Qian Y, Luan S, Krasnow SM, Thomas LL, Koharudin LMI, Benos PV, Marks DL, Gronenborn AM, Thomas G. An Insulin-Responsive Sensor in the SIRT1 Disordered Region Binds DBC1 and PACS-2 to Control Enzyme Activity. Mol Cell. 2018 Dec 20;72(6):985-998.e7. doi: 10.1016/j.molcel.2018.10.007. PubMed PMID: 30415949; PMCID: PMC6309500.
Zimmerman MG, Quicke KM, O'Neal JT, Arora N, Machiah D, Priyamvada L, Kauffman RC, Register E, Adekunle O, Swieboda D, Johnson EL, Cordes S, Haddad L, Chakraborty R, Coyne CB, Wrammert J, Suthar MS. Cross-Reactive Dengue Virus Antibodies Augment Zika Virus Infection of Human Placental Macrophages. Cell Host Microbe. 2018 Nov 14;24(5):731-742.e6. doi: 10.1016/j.chom.2018.10.008. PubMed PMID: 30439342; PMCID: PMC6394860.
Dietz RL, Hartman DJ, Zheng L, Wiley C, Pantanowitz L. Review of the use of telepathology for intraoperative consultation. Expert Rev Med Devices. 2018 Nov 18;1-8. doi: 10.1080/17434440.2018.1549987. PubMed PMID: 30451027.
Vargas B, Giacobbi NS, Sanyal A, Venkatachari NJ, Han F, Gupta P, Sluis-Cremer N. Inhibitors of Signaling Pathways That Block Reversal of HIV-1 Latency. Antimicrob Agents Chemother. 2019 Feb;63(2): doi: 10.1128/AAC.01744-18. PubMed PMID: 30455231; PMCID: PMC6355603.
Li T, Zhu Y, Cheng F, Lu C, Jung JU, Gao SJ. Oncogenic Kaposi's Sarcoma-Associated Herpesvirus Upregulates Argininosuccinate Synthase 1, a Rate-Limiting Enzyme of the Citrulline-Nitric Oxide Cycle, To Activate the STAT3 Pathway and Promote Growth Transformation. J Virol. 2019 Feb 15;93(4): doi: 10.1128/JVI.01599-18. PubMed PMID: 30463977; PMCID: PMC6364034.
Majima T, Mori K, Kadekawa K, Takai S, Funahashi Y, Reinhart B, Goins WF, Gotoh M, Glorioso JC, Yoshimura N. The effect of herpes simplex virus vector-mediated gene therapy of protein phosphatase 1α on bladder overactivity and nociception. Neurourol Urodyn. 2019 Feb;38(2):582-590. doi: 10.1002/nau.23882. PubMed PMID: 30499116.
Rocco J, Mellors JW, Macatangay BJ. Regulatory T cells: the ultimate HIV reservoir? J Virus Erad. 2018 Oct 1;4(4):209-214. PubMed PMID: 30515299; PMCID: PMC6248834.
Grabosch S, Bulatovic M, Zeng F, Ma T, Zhang L, Ross M, Brozick J, Fang Y, Tseng G, Kim E, Gambotto A, Elishaev E, P Edwards R, Vlad AM. Cisplatin-induced immune modulation in ovarian cancer mouse models with distinct inflammation profiles. Oncogene. 2019 Mar;38(13):2380-2393. doi: 10.1038/s41388-018-0581-9. PubMed PMID: 30518877; PMCID: PMC6440870.
Ding X, Jia X, Wang C, Xu J, Gao SJ, Lu C. A DHX9-lncRNA-MDM2 interaction regulates cell invasion and angiogenesis of cervical cancer. Cell Death Differ. 2018 Dec 5; doi: 10.1038/s41418-018-0242-0. PubMed PMID: 30518908.
Phillips AN, Venter F, Havlir D, Pozniak A, Kuritzkes D, Wensing A, Lundgren JD, De Luca A, Pillay D, Mellors J, Cambiano V, Bansi-Matharu L, Nakagawa F, Kalua T, Jahn A, Apollo T, Mugurungi O, Clayden P, Gupta RK, Barnabas R, Revill P, Cohn J, Bertagnolio S, Calmy A. Risks and benefits of dolutegravir-based antiretroviral drug regimens in sub-Saharan Africa: a modelling study. Lancet HIV. 2019 Feb;6(2):e116-e127. doi: 10.1016/S2352-3018(18)30317-5. PubMed PMID: 30503325; PMCID: PMC6361866.
Khatun H, Yamaoka Y, Matsushima Y, Matsunaga S, Kimura H, Ho J, Shuda M, Ryo A. Production and characterization of monoclonal antibodies specific for major capsid VP1 protein of trichodysplasia spinulosa-associated polyomavirus. Microbiol Immunol. 2018 Dec;62(12):763-773. doi: 10.1111/1348-0421.12662. PubMed PMID: 30537287.
McMillen CM, Arora N, Boyles DA, Albe JR, Kujawa MR, Bonadio JF, Coyne CB, Hartman AL. Rift Valley fever virus induces fetal demise in Sprague-Dawley rats through direct placental infection. Sci Adv. 2018 Dec;4(12):eaau9812. doi: 10.1126/sciadv.aau9812. PubMed PMID: 30525107; PMCID: PMC6281433.
Garcia-Bates TM, Palma ML, Shen C, Gambotto A, Macatangay BJC, Ferris RL, Rinaldo CR, Mailliard RB. Contrasting Roles of the PD-1 Signaling Pathway in Dendritic Cell-Mediated Induction and Regulation of HIV-1-Specific Effector T Cell Functions. J Virol. 2019 Mar 1;93(5): doi: 10.1128/JVI.02035-18. PubMed PMID: 30541848; PMCID: PMC6384070.
Toptan T, Brusadelli MG, Turpin B, Witte DP, Surrallés J, Velleuer E, Schramm M, Dietrich R, Brakenhoff RH, Moore PS, Chang Y, Wells SI. Limited detection of human polyomaviruses in Fanconi anemia related squamous cell carcinoma. PLoS One. 2018;13(12):e0209235. doi: 10.1371/journal.pone.0209235. PubMed PMID: 30589865; PMCID: PMC6307729.
Zhang SY, Zhang SW, Fan XN, Meng J, Chen Y, Gao SJ, Huang Y. Global analysis of N6-methyladenosine functions and its disease association using deep learning and network-based methods. PLoS Comput Biol. 2019 Jan;15(1):e1006663. doi: 10.1371/journal.pcbi.1006663. PubMed PMID: 30601803; PMCID: PMC6331136.
An P, Sáenz Robles MT, Duray AM, Cantalupo PG, Pipas JM. Human polyomavirus BKV infection of endothelial cells results in interferon pathway induction and persistence. PLoS Pathog. 2019 Jan;15(1):e1007505. doi: 10.1371/journal.ppat.1007505. PubMed PMID: 30620752; PMCID: PMC6338385.
Tosiano MA, Jacobs JL, Shutt KA, Cyktor JC, Mellors JW. A Simpler and More Sensitive Single-Copy HIV-1 RNA Assay for Quantification of Persistent HIV-1 Viremia in Individuals on Suppressive Antiretroviral Therapy. J Clin Microbiol. 2019 Mar;57(3): doi: 10.1128/JCM.01714-18. PubMed PMID: 30626659; PMCID: PMC6425167.
Ander SE, Diamond MS, Coyne CB. Immune responses at the maternal-fetal interface. Sci Immunol. 2019 Jan 11;4(31): doi: 10.1126/sciimmunol.aat6114. PubMed PMID: 30635356.
Ghosh A, Shao L, Sampath P, Zhao B, Patel NV, Zhu J, Behl B, Parise RA, Beumer JH, O'Sullivan RJ, DeLuca NA, Thorne SH, Rathinam VAK, Li P, Sarkar SN. Oligoadenylate-Synthetase-Family Protein OASL Inhibits Activity of the DNA Sensor cGAS during DNA Virus Infection to Limit Interferon Production. Immunity. 2019 Jan 15;50(1):51-63.e5. doi: 10.1016/j.immuni.2018.12.013. PubMed PMID: 30635239; PMCID: PMC6342484.
Evans AS, Coyne CB. RIPK3: Beyond Necroptosis. Immunity. 2019 Jan 15;50(1):1-3. doi: 10.1016/j.immuni.2018.12.031. PubMed PMID: 30650369.
Caine EA, Scheaffer SM, Arora N, Zaitsev K, Artyomov MN, Coyne CB, Moley KH, Diamond MS. Interferon lambda protects the female reproductive tract against Zika virus infection. Nat Commun. 2019 Jan 17;10(1):280. doi: 10.1038/s41467-018-07993-2. PubMed PMID: 30655513; PMCID: PMC6336786.
Ding X, Xu J, Wang C, Feng Q, Wang Q, Yang Y, Lu H, Wang F, Zhu K, Li W, Yan Q, Gao SJ, Lu C. Suppression of the SAP18/HDAC1 complex by targeting TRIM56 and Nanog is essential for oncogenic viral FLICE-inhibitory protein-induced acetylation of p65/RelA, NF-κB activation, and promotion of cell invasion and angiogenesis. Cell Death Differ. 2019 Jan 22; doi: 10.1038/s41418-018-0268-3. PubMed PMID: 30670829.
Bui JK, Cyktor JC, Fyne E, Campellone S, Mason SW, Mellors JW. Blockade of the PD-1 axis alone is not sufficient to activate HIV-1 virion production from CD4+ T cells of individuals on suppressive ART. PLoS One. 2019;14(1):e0211112. doi: 10.1371/journal.pone.0211112. PubMed PMID: 30682108; PMCID: PMC6347234.
Li W, Wang Q, Feng Q, Wang F, Yan Q, Gao SJ, Lu C. Oncogenic KSHV-encoded interferon regulatory factor upregulates HMGB2 and CMPK1 expression to promote cell invasion by disrupting a complex lncRNA-OIP5-AS1/miR-218-5p network. PLoS Pathog. 2019 Jan;15(1):e1007578. doi: 10.1371/journal.ppat.1007578. PubMed PMID: 30699189; PMCID: PMC6370251.
Boscheinen JB, Thomann S, Knipe DM, DeLuca N, Schuler-Thurner B, Gross S, Dörrie J, Schaft N, Bach C, Rohrhofer A, Werner-Klein M, Schmidt B, Schuster P. Generation of an Oncolytic Herpes Simplex Virus 1 Expressing Human MelanA. Front Immunol. 2019;102. doi: 10.3389/fimmu.2019.00002. PubMed PMID: 30723467; PMCID: PMC6349778.
Yao S, Hu M, Hao T, Li W, Xue X, Xue M, Zhu X, Zhou F, Qin D, Yan Q, Zhu J, Gao SJ, Lu C. MiRNA-891a-5p mediates HIV-1 Tat and KSHV Orf-K1 synergistic induction of angiogenesis by activating NF-κB signaling. Nucleic Acids Res. 2019 Mar 18;47(5):2700. doi: 10.1093/nar/gkz088. PubMed PMID: 30726947; PMCID: PMC6412127.
Zerbato JM, McMahon DK, Sobolewski MD, Mellors JW, Sluis-Cremer N. Naïve CD4+ T Cells Harbor a Large Inducible Reservoir of Latent, Replication-Competent HIV-1. Clin Infect Dis. 2019 Feb 7; doi: 10.1093/cid/ciz108. PubMed PMID: 30753360.
Kramer PR, Rao M, Stinson C, Bellinger LL, Kinchington PR, Yee MB. Corrigendum: Aromatase Derived Estradiol Within the Thalamus Modulates Pain Induced by Varicella Zoster Virus. Front Integr Neurosci. 2018;1266. doi: 10.3389/fnint.2018.00066. PubMed PMID: 30766482; PMCID: PMC6366361.
Hsu DC, Mellors JW. Longitudinal changes in HIV DNA in HIV controllers: what do they mean? J Int AIDS Soc. 2019 Feb;22(2):e25254. doi: 10.1002/jia2.25254. PubMed PMID: 30768753; PMCID: PMC6376800.
Bozkurt E, Gronenborn AM. Diversifying Constrained Peptide Scaffolds: How To Truss Up a Bundle Really Tight. Biochemistry. 2019 Mar 5;58(9):1179-1180. doi: 10.1021/acs.biochem.9b00065. PubMed PMID: 30785728.
Tiwari A, Swamynathan S, Alexander N, Gnalian J, Tian S, Kinchington PR, Swamynathan SK. KLF4 Regulates Corneal Epithelial Cell Cycle Progression by Suppressing Canonical TGF-β Signaling and Upregulating CDK Inhibitors P16 and P27. Invest Ophthalmol Vis Sci. 2019 Feb 1;60(2):731-740. doi: 10.1167/iovs.18-26423. PubMed PMID: 30786277; PMCID: PMC6383833.
D'Aiuto L, Bloom DC, Naciri JN, Smith A, Edwards TG, McClain L, Callio JA, Jessup M, Wood J, Chowdari K, Demers M, Abrahamson EE, Ikonomovic MD, Viggiano L, De Zio R, Watkins S, Kinchington PR, Nimgaonkar VL. Modeling Herpes Simplex Virus 1 Infections in Human Central Nervous System Neuronal Cells Using Two- and Three-Dimensional Cultures Derived from Induced Pluripotent Stem Cells. J Virol. 2019 May 1;93(9): doi: 10.1128/JVI.00111-19. PubMed PMID: 30787148; PMCID: PMC6475775.
Ding X, Jia X, Wang C, Xu J, Gao SJ, Lu C. Correction to: A DHX9-lncRNA-MDM2 interaction regulates cell invasion and angiogenesis of cervical cancer. Cell Death Differ. 2019 Feb 25; doi: 10.1038/s41418-019-0273-1. PubMed PMID: 30804472.
Morosky S, Wells AI, Lemon K, Evans AS, Schamus S, Bakkenist CJ, Coyne CB. The neonatal Fc receptor is a pan-echovirus receptor. Proc Natl Acad Sci U S A. 2019 Feb 26;116(9):3758-3763. doi: 10.1073/pnas.1817341116. PubMed PMID: 30808762; PMCID: PMC6397586.
Dremel SE, DeLuca NA. Genome replication affects transcription factor binding mediating the cascade of herpes simplex virus transcription. Proc Natl Acad Sci U S A. 2019 Feb 26;116(9):3734-3739. doi: 10.1073/pnas.1818463116. PubMed PMID: 30808759; PMCID: PMC6397523.
Pipas JM. DNA Tumor Viruses and Their Contributions to Molecular Biology. J Virol. 2019 May 1;93(9): doi: 10.1128/JVI.01524-18. PubMed PMID: 30814278; PMCID: PMC6475781.
Heinrich MJ, Purcell CA, Pruijssers AJ, Zhao Y, Spurlock CF 3rd, Sriram S, Ogden KM, Dermody TS, Scholz MB, Crooke PS 3rd, Karijolich J, Aune TM. Endogenous double-stranded Alu RNA elements stimulate IFN-responses in relapsing remitting multiple sclerosis. J Autoimmun. 2019 Jun;10040-51. doi: 10.1016/j.jaut.2019.02.003. PubMed PMID: 30826177; PMCID: PMC6513682.
Russell RW, Fritz MP, Kraus J, Quinn CM, Polenova T, Gronenborn AM. Accuracy and precision of protein structures determined by magic angle spinning NMR spectroscopy: for some 'with a little help from a friend'. J Biomol NMR. 2019 Mar 7; doi: 10.1007/s10858-019-00233-9. PubMed PMID: 30847635.
Good C, Wells AI, Coyne CB. Type III interferon signaling restricts enterovirus 71 infection of goblet cells. Sci Adv. 2019 Mar;5(3):eaau4255. doi: 10.1126/sciadv.aau4255. PubMed PMID: 30854425; PMCID: PMC6402847.
Lu M, Wang M, Sergeyev IV, Quinn CM, Struppe J, Rosay M, Maas W, Gronenborn AM, Polenova T. 19F Dynamic Nuclear Polarization at Fast Magic Angle Spinning for NMR of HIV-1 Capsid Protein Assemblies. J Am Chem Soc. 2019 Apr 10;141(14):5681-5691. doi: 10.1021/jacs.8b09216. PubMed PMID: 30871317; PMCID: PMC6521953.
Julg B, Dee L, Ananworanich J, Barouch DH, Bar K, Caskey M, Colby DJ, Dawson L, Dong KL, Dubé K, Eron J, Frater J, Gandhi RT, Geleziunas R, Goulder P, Hanna GJ, Jefferys R, Johnston R, Kuritzkes D, Li JZ, Likhitwonnawut U, van Lunzen J, Martinez-Picado J, Miller V, Montaner LJ, Nixon DF, Palm D, Pantaleo G, Peay H, Persaud D, Salzwedel J, Salzwedel K, Schacker T, Sheikh V, Søgaard OS, Spudich S, Stephenson K, Sugarman J, Taylor J, Tebas P, Tiemessen CT, Tressler R, Weiss CD, Zheng L, Robb ML, Michael NL, Mellors JW, Deeks SG, Walker BD. Recommendations for analytical antiretroviral treatment interruptions in HIV research trials-report of a consensus meeting. Lancet HIV. 2019 Apr;6(4):e259-e268. doi: 10.1016/S2352-3018(19)30052-9. PubMed PMID: 30885693.
Tenorio R, Fernández de Castro I, Knowlton JJ, Zamora PF, Sutherland DM, Risco C, Dermody TS. Function, Architecture, and Biogenesis of Reovirus Replication Neoorganelles. Viruses. 2019 Mar 21;11(3): doi: 10.3390/v11030288. PubMed PMID: 30901959; PMCID: PMC6466366.
Dermody TS, Hirsch R, Hostetter MK, Orange JS, St Geme JW 3rd. Expanding the Pipeline for Pediatric Physician-Scientists. J Pediatr. 2019 Apr;2073-7.e1. doi: 10.1016/j.jpeds.2019.01.025. PubMed PMID: 30922503.
Kristoff J, Palma ML, Garcia-Bates TM, Shen C, Sluis-Cremer N, Gupta P, Rinaldo CR, Mailliard RB. Type 1-programmed dendritic cells drive antigen-specific latency reversal and immune elimination of persistent HIV-1. EBioMedicine. 2019 May;43295-306. doi: 10.1016/j.ebiom.2019.03.077. PubMed PMID: 30952614; PMCID: PMC6557749.
Emery SP, Greene S, Murdoch G, Wiley CA. Histologic Appearance of Iatrogenic Obstructive Hydrocephalus in the Fetal Lamb Model. Fetal Diagn Ther. 2019 Apr 11;1-9. doi: 10.1159/000497360. PubMed PMID: 30974442.
Rosenbloom DIS, Bacchetti P, Stone M, Deng X, Bosch RJ, Richman DD, Siliciano JD, Mellors JW, Deeks SG, Ptak RG, Hoh R, Keating SM, Dimapasoc M, Massanella M, Lai J, Sobolewski MD, Kulpa DA, Busch MP, Reservoir Assay Validation and Evaluation Network (RAVEN) Study Group.. Assessing intra-lab precision and inter-lab repeatability of outgrowth assays of HIV-1 latent reservoir size. PLoS Comput Biol. 2019 Apr;15(4):e1006849. doi: 10.1371/journal.pcbi.1006849. PubMed PMID: 30978183; PMCID: PMC6481870.
Caves EA, Cook SA, Lee N, Stoltz D, Watkins S, Shair KHY. Erratum for Caves et al., "Air-Liquid Interface Method To Study Epstein-Barr Virus Pathogenesis in Nasopharyngeal Epithelial Cells". mSphere. 2019 Apr 17;4(2): doi: 10.1128/mSphere.00247-19. PubMed PMID: 30996110; PMCID: PMC6470210.
Frigerio A, Toptan T, Chang Y, Abbott J, Cipriano SD, Bowen AR. Widespread keratosis pilaris-like eruption in an immunocompromised child. JAAD Case Rep. 2019 Apr;5(4):352-354. doi: 10.1016/j.jdcr.2019.02.001. PubMed PMID: 31008165; PMCID: PMC6453831.
Gaydosik AM, Tabib T, Geskin LJ, Bayan CA, Conway JF, Lafyatis R, Fuschiotti P. Single-Cell Lymphocyte Heterogeneity in Advanced Cutaneous T-cell Lymphoma Skin Tumors. Clin Cancer Res. 2019 Apr 22; doi: 10.1158/1078-0432.CCR-19-0148. PubMed PMID: 31010835.
Butterfield LH, Vujanovic L, Santos PM, Maurer DM, Gambotto A, Lohr J, Li C, Waldman J, Chandran U, Lin Y, Lin H, Tawbi HA, Tarhini AA, Kirkwood JM. Multiple antigen-engineered DC vaccines with or without IFNα to promote antitumor immunity in melanoma. J Immunother Cancer. 2019 Apr 24;7(1):113. doi: 10.1186/s40425-019-0552-x. PubMed PMID: 31014399; PMCID: PMC6480917.
Newsome JT, Clemmons EA, Fitzhugh DC, Gluckman TL, Creamer-Hente MA, Tambrallo LJ, Wilder-Kofie T. Compassion Fatigue, Euthanasia Stress, and Their Management in Laboratory Animal Research. J Am Assoc Lab Anim Sci. 2019 May 1;58(3):289-292. doi: 10.30802/AALAS-JAALAS-18-000092. PubMed PMID: 31014414; PMCID: PMC6526492.
Lakdawala SS, Lee N, Brooke CB. Teaching an Old Virus New Tricks: A Review on New Approaches to Study Age-Old Questions in Influenza Biology. J Mol Biol. 2019 Apr 30; doi: 10.1016/j.jmb.2019.04.038. PubMed PMID: 31051174.
Peters JM, Kim DJ, Bility MT, Borland MG, Zhu B, Gonzalez FJ. Regulatory mechanisms mediated by peroxisome proliferator-activated receptor-β/δ in skin cancer. Mol Carcinog. 2019 May 6; doi: 10.1002/mc.23033. PubMed PMID: 31062422.
Glaubius R, Ding Y, Penrose KJ, Hood G, Engquist E, Mellors JW, Parikh UM, Abbas UL. Dapivirine vaginal ring for HIV prevention: modelling health outcomes, drug resistance and cost-effectiveness. J Int AIDS Soc. 2019 May;22(5):e25282. doi: 10.1002/jia2.25282. PubMed PMID: 31074936; PMCID: PMC6510112.
Guseman AJ, Gronenborn AM. Isomerization as the secret Achilles' heel of long-lived proteins. J Biol Chem. 2019 May 10;294(19):7556-7557. doi: 10.1074/jbc.H119.008716. PubMed PMID: 31076522; PMCID: PMC6514620.
Gruffaz M, Yuan H, Meng W, Liu H, Bae S, Kim JS, Lu C, Huang Y, Gao SJ. CRISPR-Cas9 Screening of Kaposi's Sarcoma-Associated Herpesvirus-Transformed Cells Identifies XPO1 as a Vulnerable Target of Cancer Cells. MBio. 2019 May 14;10(3): doi: 10.1128/mBio.00866-19. PubMed PMID: 31088931; PMCID: PMC6520457.
Wells AI, Coyne CB. Enteroviruses: A Gut-Wrenching Game of Entry, Detection, and Evasion. Viruses. 2019 May 21;11(5): doi: 10.3390/v11050460. PubMed PMID: 31117206; PMCID: PMC6563291.
Abdel-Massih RC, Mellors JW. Telemedicine and Infectious Diseases Practice: A Leap Forward or a Step Back? Open Forum Infect Dis. 2019 May;6(5):ofz196. doi: 10.1093/ofid/ofz196. PubMed PMID: 31139674; PMCID: PMC6527083.
Chimukangara B, Lessells RJ, Rhee SY, Giandhari J, Kharsany ABM, Naidoo K, Lewis L, Cawood C, Khanyile D, Ayalew KA, Diallo K, Samuel R, Hunt G, Vandormael A, Stray-Pedersen B, Gordon M, Makadzange T, Kiepiela P, Ramjee G, Ledwaba J, Kalimashe M, Morris L, Parikh UM, Mellors JW, Shafer RW, Katzenstein D, Moodley P, Gupta RK, Pillay D, Abdool Karim SS, de Oliveira T. Trends in Pretreatment HIV-1 Drug Resistance in Antiretroviral Therapy-naive Adults in South Africa, 2000-2016: A Pooled Sequence Analysis. EClinicalMedicine. 2019 Mar;926-34. doi: 10.1016/j.eclinm.2019.03.006. PubMed PMID: 31143879; PMCID: PMC6510720.
Flores RR, Carbo L, Kim E, Van Meter M, De Padilla CML, Zhao J, Colangelo D, Yousefzadeh MJ, Angelini LA, Zhang L, Pola E, Vo N, Evans CH, Gambotto A, Niedernhofer LJ, Robbins PD. Adenoviral gene transfer of a single-chain IL-23 induces psoriatic arthritis-like symptoms in NOD mice. FASEB J. 2019 Jun 6;fj201900420R. doi: 10.1096/fj.201900420R. PubMed PMID: 31170010.
Sun R, Cheng E, Velásquez C, Chang Y, Moore PS. Mitosis-related phosphorylation of the eukaryotic translation suppressor 4E-BP1 and its interaction with eukaryotic translation initiation factor 4E (eIF4E). J Biol Chem. 2019 Jun 14; doi: 10.1074/jbc.RA119.008512. PubMed PMID: 31201269.
Coffin JM, Wells DW, Zerbato JM, Kuruc JD, Guo S, Luke BT, Eron JJ, Bale M, Spindler J, Simonetti FR, Hill S, Kearney MF, Maldarelli F, Wu X, Mellors JW, Hughes SH. Clones of infected cells arise early in HIV-infected individuals. JCI Insight. 2019 Jun 20;4(12): doi: 10.1172/jci.insight.128432. PubMed PMID: 31217357.