Member Publications

Moore PS, Chang Y. The conundrum of causality in tumor virology: the cases of KSHV and MCV. Semin Cancer Biol. 2014 Jun;264-12. doi: 10.1016/j.semcancer.2013.11.001. PubMed PMID: 24304907; PMCID: PMC4040341.
Soloff AC, Bissel SJ, Junecko BF, Giles BM, Reinhart TA, Ross TM, Barratt-Boyes SM. Massive mobilization of dendritic cells during influenza A virus subtype H5N1 infection of nonhuman primates. J Infect Dis. 2014 Jun 15;209(12):2012-6. doi: 10.1093/infdis/jiu009. PubMed PMID: 24403559; PMCID: PMC4038140.
Hou W, Chen H, Rojas J, Sampath P, Thorne SH. Oncolytic vaccinia virus demonstrates antiangiogenic effects mediated by targeting of VEGF. Int J Cancer. 2014 Sep 1;135(5):1238-46. doi: 10.1002/ijc.28747. PubMed PMID: 24474587; PMCID: PMC4061259.
Li Z, Pantanowitz L, Khalbuss WE, Arya P, Monaco SE. Challenges in diagnosing metastatic breast carcinoma in fluid cytology. Diagn Cytopathol. 2014 Nov;42(11):1006-8. doi: 10.1002/dc.23067. PubMed PMID: 24610775.
D'Aiuto L, Prasad KM, Upton CH, Viggiano L, Milosevic J, Raimondi G, McClain L, Chowdari K, Tischfield J, Sheldon M, Moore JC, Yolken RH, Kinchington PR, Nimgaonkar VL. Persistent infection by HSV-1 is associated with changes in functional architecture of iPSC-derived neurons and brain activation patterns underlying working memory performance. Schizophr Bull. 2015 Jan;41(1):123-32. doi: 10.1093/schbul/sbu032. PubMed PMID: 24622295; PMCID: PMC4266288.
Davison JM, Choudry HA, Pingpank JF, Ahrendt SA, Holtzman MP, Zureikat AH, Zeh HJ, Ramalingam L, Zhu B, Nikiforova M, Bartlett DL, Pai RK. Clinicopathologic and molecular analysis of disseminated appendiceal mucinous neoplasms: identification of factors predicting survival and proposed criteria for a three-tiered assessment of tumor grade. Mod Pathol. 2014 Nov;27(11):1521-39. doi: 10.1038/modpathol.2014.37. PubMed PMID: 24633196.
Friedman MR, Stall R, Silvestre AJ, Mustanski B, Shoptaw S, Surkan PJ, Rinaldo CR, Plankey MW. Stuck in the middle: longitudinal HIV-related health disparities among men who have sex with men and women. J Acquir Immune Defic Syndr. 2014 Jun 1;66(2):213-20. doi: 10.1097/QAI.0000000000000143. PubMed PMID: 24662298; PMCID: PMC4030741.
Thapa DR, Hussain SK, Tran WC, Dʼsouza G, Bream JH, Achenback CJ, Ayyavoo V, Detels R, Martínez-Maza O. Serum microRNAs in HIV-infected individuals as pre-diagnosis biomarkers for AIDS-NHL. J Acquir Immune Defic Syndr. 2014 Jun 1;66(2):229-37. doi: 10.1097/QAI.0000000000000146. PubMed PMID: 24675587; PMCID: PMC4096008.
Rinaldo CR, Kunin CM. Monto Ho, in memoriam. Clin Infect Dis. 2014 Jun;58(12):1780-1. doi: 10.1093/cid/ciu193. PubMed PMID: 24668126.
Downs-Canner S, Bartlett DL. Regional delivery of oncolytic vaccinia virus: it's time for clinical trials. Ann Surg Oncol. 2014 Jul;21(7):2127-8. doi: 10.1245/s10434-014-3660-3. PubMed PMID: 24682649; PMCID: PMC4262111.
Wijewardana V, Bouwer AL, Brown KN, Liu X, Barratt-Boyes SM. Accumulation of functionally immature myeloid dendritic cells in lymph nodes of rhesus macaques with acute pathogenic simian immunodeficiency virus infection. Immunology. 2014 Oct;143(2):146-54. doi: 10.1111/imm.12295. PubMed PMID: 24684292; PMCID: PMC4172131.
Debiec KT, Gronenborn AM, Chong LT. Evaluating the strength of salt bridges: a comparison of current biomolecular force fields. J Phys Chem B. 2014 Jun 19;118(24):6561-9. doi: 10.1021/jp500958r. PubMed PMID: 24702709; PMCID: PMC4064690.
Bissel SJ, Winkler CC, DelTondo J, Wang G, Williams K, Wiley CA. Coxsackievirus B4 myocarditis and meningoencephalitis in newborn twins. Neuropathology. 2014 Oct;34(5):429-437. doi: 10.1111/neup.12121. PubMed PMID: 24702280; PMCID: PMC4188796.
Harkness JM, Kader M, DeLuca NA. Transcription of the herpes simplex virus 1 genome during productive and quiescent infection of neuronal and nonneuronal cells. J Virol. 2014 Jun;88(12):6847-61. doi: 10.1128/JVI.00516-14. PubMed PMID: 24719411; PMCID: PMC4054390.
Tarafdar S, Poe JA, Smithgall TE. The accessory factor Nef links HIV-1 to Tec/Btk kinases in an Src homology 3 domain-dependent manner. J Biol Chem. 2014 May 30;289(22):15718-28. doi: 10.1074/jbc.M114.572099. PubMed PMID: 24722985; PMCID: PMC4140925.
Markus A, Waldman Ben-Asher H, Kinchington PR, Goldstein RS. Cellular transcriptome analysis reveals differential expression of pro- and antiapoptosis genes by varicella-zoster virus-infected neurons and fibroblasts. J Virol. 2014 Jul;88(13):7674-7. doi: 10.1128/JVI.00500-14. PubMed PMID: 24741086; PMCID: PMC4054417.
Karunamurthy A, Cai G, Dacic S, Khalbuss WE, Pantanowitz L, Monaco SE. Reply to verification bias in diagnostic accuracy studies for fine-needle aspiration cytology. Cancer Cytopathol. 2014 Jun;122(6):474-5. doi: 10.1002/cncy.21432. PubMed PMID: 24753510.
Sharaf NG, Poliner E, Slack RL, Christen MT, Byeon IJ, Parniak MA, Gronenborn AM, Ishima R. The p66 immature precursor of HIV-1 reverse transcriptase. Proteins. 2014 Oct;82(10):2343-52. doi: 10.1002/prot.24594. PubMed PMID: 24771554; PMCID: PMC4441793.
Rogers MB, Cui L, Fitch A, Popov V, Travassos da Rosa AP, Vasilakis N, Tesh RB, Ghedin E. Whole genome analysis of sierra nevada virus, a novel mononegavirus in the family nyamiviridae. Am J Trop Med Hyg. 2014 Jul;91(1):159-64. doi: 10.4269/ajtmh.14-0076. PubMed PMID: 24778199; PMCID: PMC4080556.
Mishra N, Pereira M, Rhodes RH, An P, Pipas JM, Jain K, Kapoor A, Briese T, Faust PL, Lipkin WI. Identification of a novel polyomavirus in a pancreatic transplant recipient with retinal blindness and vasculitic myopathy. J Infect Dis. 2014 Nov 15;210(10):1595-9. doi: 10.1093/infdis/jiu250. PubMed PMID: 24795478; PMCID: PMC4334791.
Forero A, Giacobbi NS, McCormick KD, Gjoerup OV, Bakkenist CJ, Pipas JM, Sarkar SN. Simian virus 40 large T antigen induces IFN-stimulated genes through ATR kinase. J Immunol. 2014 Jun 15;192(12):5933-42. doi: 10.4049/jimmunol.1303470. PubMed PMID: 24799566; PMCID: PMC4078001.
Chang PY, Detels R, Martínez-Maza O, Zhang ZF, Jacobson LP, Margolick JB, Variakojis D, Rinaldo CR Jr, Hussain SK. Comment on "characteristics of B-cell lymphomas in HIV/HCV-coinfected patients during the combined antiretroviral therapy era: an ANRS CO16 LYMPHOVIR cohort study". J Acquir Immune Defic Syndr. 2014 Oct 1;67(2):e84-6. doi: 10.1097/QAI.0000000000000204. PubMed PMID: 24820108; PMCID: PMC4162807.
Zimmerman RK, Rinaldo CR, Nowalk MP, Gk B, Thompson MG, Moehling KK, Bullotta A, Wisniewski S. Influenza and other respiratory virus infections in outpatients with medically attended acute respiratory infection during the 2011-12 influenza season. Influenza Other Respir Viruses. 2014 Jul;8(4):397-405. doi: 10.1111/irv.12247. PubMed PMID: 24852890; PMCID: PMC4057994.
Stevenson HP, Makhov AM, Calero M, Edwards AL, Zeldin OB, Mathews II, Lin G, Barnes CO, Santamaria H, Ross TM, Soltis SM, Khosla C, Nagarajan V, Conway JF, Cohen AE, Calero G. Use of transmission electron microscopy to identify nanocrystals of challenging protein targets. Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8470-5. doi: 10.1073/pnas.1400240111. PubMed PMID: 24872454; PMCID: PMC4060711.
Aamer HA, Rajakumar P, Nyaundi J, Murphey-Corb M. Resistance to simian immunodeficiency virus low dose rectal challenge is associated with higher constitutive TRIM5α expression in PBMC. Retrovirology. 2014 May 23;1139. doi: 10.1186/1742-4690-11-39. PubMed PMID: 24884551; PMCID: PMC4041354.
Stevenson HP, DePonte DP, Makhov AM, Conway JF, Zeldin OB, Boutet S, Calero G, Cohen AE. Transmission electron microscopy as a tool for nanocrystal characterization pre- and post-injector. Philos Trans R Soc Lond B Biol Sci. 2014 Jul 17;369(1647):20130322. doi: 10.1098/rstb.2013.0322. PubMed PMID: 24914151; PMCID: PMC4052860.
Polanco PM, Sanchez AI, Ramalingam L, Jones H, Zureikat A, Holtzman M, Ahrendt S, Pingpank J, Zeh HJ, Bartlett DL, Choudry HA. Does obesity affect outcomes of cytoreductive surgery and hyperthermic intraperitoneal chemoperfusion for disseminated mucinous appendiceal neoplasms? Ann Surg Oncol. 2014 Nov;21(12):3963-9. doi: 10.1245/s10434-014-3807-2. PubMed PMID: 24916747.
Cranston RD, Baker JR, Liu Y, Wang L, Elishaev E, Ho KS. Topical application of trichloroacetic acid is efficacious for the treatment of internal anal high-grade squamous intraepithelial lesions in HIV-positive men. Sex Transm Dis. 2014 Jul;41(7):420-6. doi: 10.1097/OLQ.0000000000000145. PubMed PMID: 24922100.
Nolen BM, Breen EC, Bream JH, Jenkins FJ, Kingsley LA, Rinaldo CR, Lokshin AE. Circulating mediators of inflammation and immune activation in AIDS-related non-hodgkin lymphoma. PLoS One. 2014;9(6):e99144. doi: 10.1371/journal.pone.0099144. PubMed PMID: 24922518; PMCID: PMC4055650.
Singhi AD, Davison JM, Choudry HA, Pingpank JF, Ahrendt SA, Holtzman MP, Zureikat AH, Zeh HJ, Ramalingam L, Mantha G, Nikiforova M, Bartlett DL, Pai RK. GNAS is frequently mutated in both low-grade and high-grade disseminated appendiceal mucinous neoplasms but does not affect survival. Hum Pathol. 2014 Aug;45(8):1737-43. doi: 10.1016/j.humpath.2014.04.018. PubMed PMID: 24925222.
Forero A, McCormick KD, Jenkins FJ, Sarkar SN. Downregulation of IRF4 induces lytic reactivation of KSHV in primary effusion lymphoma cells. Virology. 2014 Jun;458-4594-10. doi: 10.1016/j.virol.2014.04.020. PubMed PMID: 24928034; PMCID: PMC4058074.
Zhu J, Zhang Y, Ghosh A, Cuevas RA, Forero A, Dhar J, Ibsen MS, Schmid-Burgk JL, Schmidt T, Ganapathiraju MK, Fujita T, Hartmann R, Barik S, Hornung V, Coyne CB, Sarkar SN. Antiviral activity of human OASL protein is mediated by enhancing signaling of the RIG-I RNA sensor. Immunity. 2014 Jun 19;40(6):936-48. doi: 10.1016/j.immuni.2014.05.007. PubMed PMID: 24931123; PMCID: PMC4101812.
Smith KN, Mailliard RB, Larsen BB, Wong K, Gupta P, Mullins JI, Rinaldo CR. Dendritic cells restore CD8+ T cell reactivity to autologous HIV-1. J Virol. 2014 Sep 1;88(17):9976-90. doi: 10.1128/JVI.01275-14. PubMed PMID: 24942586; PMCID: PMC4136313.
Yu X, Bian X, Throop A, Song L, Moral LD, Park J, Seiler C, Fiacco M, Steel J, Hunter P, Saul J, Wang J, Qiu J, Pipas JM, LaBaer J. Exploration of panviral proteome: high-throughput cloning and functional implications in virus-host interactions. Theranostics. 2014;4(8):808-22. doi: 10.7150/thno.8255. PubMed PMID: 24955142; PMCID: PMC4063979.
Férir G, Huskens D, Noppen S, Koharudin LM, Gronenborn AM, Schols D. Broad anti-HIV activity of the Oscillatoria agardhii agglutinin homologue lectin family. J Antimicrob Chemother. 2014 Oct;69(10):2746-58. doi: 10.1093/jac/dku220. PubMed PMID: 24970741; PMCID: PMC4164143.
Sáenz Robles MT, Chong JL, Koivisto C, Trimboli A, Liu H, Leone G, Pipas JM. Viral oncogene expression in the stem/progenitor cell compartment of the mouse intestine induces adenomatous polyps. Mol Cancer Res. 2014 Oct;12(10):1355-64. doi: 10.1158/1541-7786.MCR-14-0166. PubMed PMID: 24994749; PMCID: PMC4201981.
Low CA, Bovbjerg DH, Jenkins FJ, Ahrendt SA, Choudry HA, Holtzman MP, Jones HL, Pingpank JF, Ramalingam L, Zeh HJ, Zureikat AH, Bartlett DL. Preoperative inflammatory biomarkers and neurovegetative symptoms in peritoneal carcinomatosis patients. Brain Behav Immun. 2014 Nov;4265-8. doi: 10.1016/j.bbi.2014.06.019. PubMed PMID: 25004281; PMCID: PMC4252780.
Koharudin LM, Gronenborn AM. Antiviral lectins as potential HIV microbicides. Curr Opin Virol. 2014 Aug;795-100. doi: 10.1016/j.coviro.2014.05.006. PubMed PMID: 25010042; PMCID: PMC4149946.
Hensler HR, Tomaszewski MJ, Rappocciolo G, Rinaldo CR, Jenkins FJ. Human herpesvirus 8 glycoprotein B binds the entry receptor DC-SIGN. Virus Res. 2014 Sep 22;19097-103. doi: 10.1016/j.virusres.2014.07.003. PubMed PMID: 25018023; PMCID: PMC4142096.
Shridhar V, Chen Y, Gupta P. The CD8 antiviral factor (CAF) can suppress HIV-1 transcription from the long terminal repeat (LTR) promoter in the absence of elements upstream of the CATATAA box. Virol J. 2014 Jul 21;11130. doi: 10.1186/1743-422X-11-130. PubMed PMID: 25048949; PMCID: PMC4223764.
Sae-Ueng U, Liu T, Catalano CE, Huffman JB, Homa FL, Evilevitch A. Major capsid reinforcement by a minor protein in herpesviruses and phage. Nucleic Acids Res. 2014 Aug;42(14):9096-107. doi: 10.1093/nar/gku634. PubMed PMID: 25053840; PMCID: PMC4132744.
Cucoranu IC, Parwani AV, Vepa S, Weinstein RS, Pantanowitz L. Digital pathology: A systematic evaluation of the patent landscape. J Pathol Inform. 2014;5(1):16. doi: 10.4103/2153-3539.133112. PubMed PMID: 25057430; PMCID: PMC4060404.
Boone BA, Steve J, Zenati MS, Hogg ME, Singhi AD, Bartlett DL, Zureikat AH, Bahary N, Zeh HJ 3rd. Serum CA 19-9 response to neoadjuvant therapy is associated with outcome in pancreatic adenocarcinoma. Ann Surg Oncol. 2014 Dec;21(13):4351-8. doi: 10.1245/s10434-014-3842-z. PubMed PMID: 25092157.
Bayer A, Delorme-Axford E, Sleigher C, Frey TK, Trobaugh DW, Klimstra WB, Emert-Sedlak LA, Smithgall TE, Kinchington PR, Vadia S, Seveau S, Boyle JP, Coyne CB, Sadovsky Y. Human trophoblasts confer resistance to viruses implicated in perinatal infection. Am J Obstet Gynecol. 2015 Jan;212(1):71.e1-71.e8. doi: 10.1016/j.ajog.2014.07.060. PubMed PMID: 25108145; PMCID: PMC4275367.
Xue M, Yao S, Hu M, Li W, Hao T, Zhou F, Zhu X, Lu H, Qin D, Yan Q, Zhu J, Gao SJ, Lu C. HIV-1 Nef and KSHV oncogene K1 synergistically promote angiogenesis by inducing cellular miR-718 to regulate the PTEN/AKT/mTOR signaling pathway. Nucleic Acids Res. 2014 Sep;42(15):9862-79. doi: 10.1093/nar/gku583. PubMed PMID: 25104021; PMCID: PMC4150761.
Alvarado JJ, Tarafdar S, Yeh JI, Smithgall TE. Interaction with the Src homology (SH3-SH2) region of the Src-family kinase Hck structures the HIV-1 Nef dimer for kinase activation and effector recruitment. J Biol Chem. 2014 Oct 10;289(41):28539-53. doi: 10.1074/jbc.M114.600031. PubMed PMID: 25122770; PMCID: PMC4192505.
Seneca NTM, Sáenz Robles MT, Pipas JM. Removal of a small C-terminal region of JCV and SV40 large T antigens has differential effects on transformation. Virology. 2014 Nov;468-47047-56. doi: 10.1016/j.virol.2014.07.038. PubMed PMID: 25129438; PMCID: PMC4253650.
Moroco JA, Craigo JK, Iacob RE, Wales TE, Engen JR, Smithgall TE. Differential sensitivity of Src-family kinases to activation by SH3 domain displacement. PLoS One. 2014;9(8):e105629. doi: 10.1371/journal.pone.0105629. PubMed PMID: 25144189; PMCID: PMC4140816.
Kim SY, Lee DH, Song X, Bartlett DL, Kwon YT, Lee YJ. Role of Bcl-xL/Beclin-1 in synergistic apoptotic effects of secretory TRAIL-armed adenovirus in combination with mitomycin C and hyperthermia on colon cancer cells. Apoptosis. 2014 Nov;19(11):1603-15. doi: 10.1007/s10495-014-1028-6. PubMed PMID: 25156145; PMCID: PMC4196052.
Kirk KA, Boone BA, Evans L, Evans S, Bartlett DL, Holtzman MP. Analysis of outcomes for single-incision laparoscopic surgery (SILS) right colectomy reveals a minimal learning curve. Surg Endosc. 2015 Jun;29(6):1356-62. doi: 10.1007/s00464-014-3803-4. PubMed PMID: 25171884.
Harris KG, Coyne CB. Death waits for no man--does it wait for a virus? How enteroviruses induce and control cell death. Cytokine Growth Factor Rev. 2014 Oct;25(5):587-96. doi: 10.1016/j.cytogfr.2014.08.002. PubMed PMID: 25172372; PMCID: PMC4371850.
Yang S, Deng P, Zhu Z, Zhu J, Wang G, Zhang L, Chen AF, Wang T, Sarkar SN, Billiar TR, Wang Q. Adenosine deaminase acting on RNA 1 limits RIG-I RNA detection and suppresses IFN production responding to viral and endogenous RNAs. J Immunol. 2014 Oct 1;193(7):3436-45. doi: 10.4049/jimmunol.1401136. PubMed PMID: 25172485; PMCID: PMC4169998.
Liu C, Cook SJ, Craigo JK, Cook FR, Issel CJ, Montelaro RC, Horohov DW. Epitope shifting of gp90-specific cellular immune responses in EIAV-infected ponies. Vet Immunol Immunopathol. 2014 Oct 15;161(3-4):161-9. doi: 10.1016/j.vetimm.2014.08.001. PubMed PMID: 25176006; PMCID: PMC4337894.
Knowlton ER, Rappocciolo G, Piazza P, Lepone LM, Nadgir SV, Bullotta A, Berendam SJ, Li J, Reinhart TA, Jenkins FJ, Rinaldo CR. Human herpesvirus 8 induces polyfunctional B lymphocytes that drive Kaposi's sarcoma. mBio. 2014 Sep 2;5(5):e01277-14. doi: 10.1128/mBio.01277-14. PubMed PMID: 25182322; PMCID: PMC4173773.
Roy S, Pantanowitz L, Amin M, Seethala RR, Ishtiaque A, Yousem SA, Parwani AV, Cucoranu I, Hartman DJ. Smartphone adapters for digital photomicrography. J Pathol Inform. 2014;5(1):24. doi: 10.4103/2153-3539.137728. PubMed PMID: 25191623; PMCID: PMC4141421.
Yeh FC, Parwani AV, Pantanowitz L, Ho C. Automated grading of renal cell carcinoma using whole slide imaging. J Pathol Inform. 2014;5(1):23. doi: 10.4103/2153-3539.137726. PubMed PMID: 25191622; PMCID: PMC4141422.
Kim E, Okada K, Kenniston T, Raj VS, AlHajri MM, Farag EA, AlHajri F, Osterhaus AD, Haagmans BL, Gambotto A. Immunogenicity of an adenoviral-based Middle East Respiratory Syndrome coronavirus vaccine in BALB/c mice. Vaccine. 2014 Oct 14;32(45):5975-82. doi: 10.1016/j.vaccine.2014.08.058. PubMed PMID: 25192975; PMCID: PMC7115510.
Mazzacurati L, Marzulli M, Reinhart B, Miyagawa Y, Uchida H, Goins WF, Li A, Kaur B, Caligiuri M, Cripe T, Chiocca EA, Amankulor N, Cohen JB, Glorioso JC, Grandi P. Use of miRNA response sequences to block off-target replication and increase the safety of an unattenuated, glioblastoma-targeted oncolytic HSV. Mol Ther. 2015 Jan;23(1):99-107. doi: 10.1038/mt.2014.177. PubMed PMID: 25200130; PMCID: PMC4426800.
Sae-Ueng U, Li D, Zuo X, Huffman JB, Homa FL, Rau D, Evilevitch A. Solid-to-fluid DNA transition inside HSV-1 capsid close to the temperature of infection. Nat Chem Biol. 2014 Oct;10(10):861-7. doi: 10.1038/nchembio.1628. PubMed PMID: 25195012; PMCID: PMC6528806.
Trivedi RN, Akhtar P, Meade J, Bartlow P, Ataai MM, Khan SA, Domach MM. High-Level Production of Plasmid DNA by Escherichia coli DH5α ΩsacB by Introducing inc Mutations. Appl Environ Microbiol. 2014 Dec;80(23):7154-60. doi: 10.1128/AEM.02445-14. PubMed PMID: 25217014; PMCID: PMC4249171.
Campbell DM, Rappocciolo G, Jenkins FJ, Rinaldo CR. Dendritic cells: key players in human herpesvirus 8 infection and pathogenesis. Front Microbiol. 2014;5452. doi: 10.3389/fmicb.2014.00452. PubMed PMID: 25221546; PMCID: PMC4148009.
Fraietta JA, Mueller YM, Lozenski KL, Ratner D, Boesteanu AC, Hancock AS, Lackman-Smith C, Zentner IJ, Chaiken IM, Chung S, LeGrice SF, Snyder BA, Mankowski MK, Jones NM, Hope JL, Gupta P, Anderson SH, Wigdahl B, Katsikis PD. Abasic phosphorothioate oligomers inhibit HIV-1 reverse transcription and block virus transmission across polarized ectocervical organ cultures. Antimicrob Agents Chemother. 2014 Dec;58(12):7056-71. doi: 10.1128/AAC.02991-14. PubMed PMID: 25224013; PMCID: PMC4249537.
Ho J, Jedrych JJ, Feng H, Natalie AA, Grandinetti L, Mirvish E, Crespo MM, Yadav D, Fasanella KE, Proksell S, Kuan SF, Pastrana DV, Buck CB, Shuda Y, Moore PS, Chang Y. Human polyomavirus 7-associated pruritic rash and viremia in transplant recipients. J Infect Dis. 2015 May 15;211(10):1560-5. doi: 10.1093/infdis/jiu524. PubMed PMID: 25231015; PMCID: PMC4425822.
Zhang L, Franks J, Stolz DB, Conway JF, Thibodeau PH. Inducible polymerization and two-dimensional assembly of the repeats-in-toxin (RTX) domain from the Pseudomonas aeruginosa alkaline protease. Biochemistry. 2014 Oct 21;53(41):6452-62. doi: 10.1021/bi5007546. PubMed PMID: 25232897; PMCID: PMC4204888.
Ho J, Ahlers SM, Stratman C, Aridor O, Pantanowitz L, Fine JL, Kuzmishin JA, Montalto MC, Parwani AV. Can digital pathology result in cost savings? A financial projection for digital pathology implementation at a large integrated health care organization. J Pathol Inform. 2014;5(1):33. doi: 10.4103/2153-3539.139714. PubMed PMID: 25250191; PMCID: PMC4168664.
Rohde GK, Ozolek JA, Parwani AV, Pantanowitz L. Carnegie Mellon University bioimaging day 2014: Challenges and opportunities in digital pathology. J Pathol Inform. 2014;5(1):32. doi: 10.4103/2153-3539.139712. PubMed PMID: 25250190; PMCID: PMC4168545.
Pantanowitz L, Krupinski EA. American Telemedicine Association 2014 meeting: What did you miss? J Pathol Inform. 2014;5(1):30. doi: 10.4103/2153-3539.139710. PubMed PMID: 25250188; PMCID: PMC4168546.
Miller MR, Mandell JB, Beatty KM, Harvey SA, Rizzo MJ, Previte DM, Thorne SH, McKenna KC. Splenectomy promotes indirect elimination of intraocular tumors by CD8+ T cells that is associated with IFNγ- and Fas/FasL-dependent activation of intratumoral macrophages. Cancer Immunol Res. 2014 Dec;2(12):1175-85. doi: 10.1158/2326-6066.CIR-14-0093-T. PubMed PMID: 25248763; PMCID: PMC4258428.
Lukens S, DePasse J, Rosenfeld R, Ghedin E, Mochan E, Brown ST, Grefenstette J, Burke DS, Swigon D, Clermont G. A large-scale immuno-epidemiological simulation of influenza A epidemics. BMC Public Health. 2014 Sep 29;141019. doi: 10.1186/1471-2458-14-1019. PubMed PMID: 25266818; PMCID: PMC4194421.
Kwun HJ, Toptan T, Ramos da Silva S, Atkins JF, Moore PS, Chang Y. Human DNA tumor viruses generate alternative reading frame proteins through repeat sequence recoding. Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):E4342-9. doi: 10.1073/pnas.1416122111. PubMed PMID: 25271323; PMCID: PMC4205619.
Rhoads DD, Sintchenko V, Rauch CA, Pantanowitz L. Clinical microbiology informatics. Clin Microbiol Rev. 2014 Oct;27(4):1025-47. doi: 10.1128/CMR.00049-14. PubMed PMID: 25278581; PMCID: PMC4187636.
Zhou J, Qu Z, Yan S, Sun F, Whitsett JA, Shapiro SD, Xiao G. Differential roles of STAT3 in the initiation and growth of lung cancer. Oncogene. 2015 Jul;34(29):3804-3814. doi: 10.1038/onc.2014.318. PubMed PMID: 25284582; PMCID: PMC4387125.
Koharudin LM, Wu Y, DeLucia M, Mehrens J, Gronenborn AM, Ahn J. Structural basis of allosteric activation of sterile α motif and histidine-aspartate domain-containing protein 1 (SAMHD1) by nucleoside triphosphates. J Biol Chem. 2014 Nov 21;289(47):32617-27. doi: 10.1074/jbc.M114.591958. PubMed PMID: 25288794; PMCID: PMC4239615.
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Beachler DC, Guo Y, Xiao W, Burk RD, Minkoff H, Strickler HD, Cranston RD, Wiley DJ, Jacobson LP, Weber KM, Margolick JB, Sugar EA, Reddy S, Gillison ML, D'Souza G. High Oral Human Papillomavirus Type 16 Load Predicts Long-term Persistence in Individuals With or at Risk for HIV Infection. J Infect Dis. 2015 Nov 15;212(10):1588-91. doi: 10.1093/infdis/jiv273. PubMed PMID: 25954049; PMCID: PMC4621250.
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Grigoryan S, Yee MB, Glick Y, Gerber D, Kepten E, Garini Y, Yang IH, Kinchington PR, Goldstein RS. Direct transfer of viral and cellular proteins from varicella-zoster virus-infected non-neuronal cells to human axons. PLoS One. 2015;10(5):e0126081. doi: 10.1371/journal.pone.0126081. PubMed PMID: 25973990; PMCID: PMC4431828.
Zhang H, Cockrell SK, Kolawole AO, Rotem A, Serohijos AW, Chang CB, Tao Y, Mehoke TS, Han Y, Lin JS, Giacobbi NS, Feldman AB, Shakhnovich E, Weitz DA, Wobus CE, Pipas JM. Isolation and Analysis of Rare Norovirus Recombinants from Coinfected Mice Using Drop-Based Microfluidics. J Virol. 2015 Aug;89(15):7722-34. doi: 10.1128/JVI.01137-15. PubMed PMID: 25972549; PMCID: PMC4505660.
Wasil LR, Wei L, Chang C, Lan L, Shair KH. Regulation of DNA Damage Signaling and Cell Death Responses by Epstein-Barr Virus Latent Membrane Protein 1 (LMP1) and LMP2A in Nasopharyngeal Carcinoma Cells. J Virol. 2015 Aug;89(15):7612-24. doi: 10.1128/JVI.00958-15. PubMed PMID: 25972552; PMCID: PMC4505682.
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Hanna MG, Pantanowitz L, Evans AJ. Overview of contemporary guidelines in digital pathology: what is available in 2015 and what still needs to be addressed? J Clin Pathol. 2015 Jul;68(7):499-505. doi: 10.1136/jclinpath-2015-202914. PubMed PMID: 25979986.
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Liu C, Voronin D, Poole CB, Bachu S, Rogers MB, Jin J, Ghedin E, Lustigman S, McReynolds LA, Unnasch TR. Functional analysis of microRNA activity in Brugia malayi. Int J Parasitol. 2015 Aug;45(9-10):579-83. doi: 10.1016/j.ijpara.2015.04.004. PubMed PMID: 26004246; PMCID: PMC4490087.
McGowan I, Anton PA, Elliott J, Cranston RD, Duffill K, Althouse AD, Hawkins KL, De Rosa SC. Exploring the feasibility of multi-site flow cytometric processing of gut associated lymphoid tissue with centralized data analysis for multi-site clinical trials. PLoS One. 2015;10(5):e0126454. doi: 10.1371/journal.pone.0126454. PubMed PMID: 26010577; PMCID: PMC4444258.
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Markus A, Lebenthal-Loinger I, Yang IH, Kinchington PR, Goldstein RS. An in vitro model of latency and reactivation of varicella zoster virus in human stem cell-derived neurons. PLoS Pathog. 2015 Jun;11(6):e1004885. doi: 10.1371/journal.ppat.1004885. PubMed PMID: 26042814; PMCID: PMC4456082.
Wu Y, Koharudin LMI, Mehrens J, DeLucia M, Byeon CH, Byeon IL, Calero G, Ahn J, Gronenborn AM. Structural Basis of Clade-specific Engagement of SAMHD1 (Sterile α Motif and Histidine/Aspartate-containing Protein 1) Restriction Factors by Lentiviral Viral Protein X (Vpx) Virulence Factors. J Biol Chem. 2015 Jul 17;290(29):17935-17945. doi: 10.1074/jbc.M115.665513. PubMed PMID: 26045556; PMCID: PMC4505041.
Farahani N, Pantanowitz L. Overview of Telepathology. Surg Pathol Clin. 2015 Jun;8(2):223-31. doi: 10.1016/j.path.2015.02.018. PubMed PMID: 26065796.
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Leyva F, Fuchs EJ, Bakshi R, Carballo-Dieguez A, Ventuneac A, Yue C, Caffo B, Du Y, Torbenson M, Li L, Mullin G, Lee L, Rohan L, Anton PA, Hendrix CW. Simultaneous Evaluation of Safety, Acceptability, Pericoital Kinetics, and Ex Vivo Pharmacodynamics Comparing Four Rectal Microbicide Vehicle Candidates. AIDS Res Hum Retroviruses. 2015 Nov;31(11):1089-97. doi: 10.1089/AID.2015.0086. PubMed PMID: 26066390; PMCID: PMC4651043.
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Chiang CH, Chu CT, Wiley CA. A 67 Year-Old Man with Multiple Sclerosis and New Cerebellar Lesions. Brain Pathol. 2015 Jul;25(4):507-8. doi: 10.1111/bpa.12269. PubMed PMID: 26095593; PMCID: PMC8028900.
Rhoads DD, Novak SM, Pantanowitz L. A review of the current state of digital plate reading of cultures in clinical microbiology. J Pathol Inform. 2015;623. doi: 10.4103/2153-3539.157789. PubMed PMID: 26110091; PMCID: PMC4466785.
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Pantanowitz L, Carbone A, Dolcetti R. Microenvironment and HIV-related lymphomagenesis. Semin Cancer Biol. 2015 Oct;3452-7. doi: 10.1016/j.semcancer.2015.06.002. PubMed PMID: 26118690.
Qu Z, Sun F, Zhou J, Li L, Shapiro SD, Xiao G. Interleukin-6 Prevents the Initiation but Enhances the Progression of Lung Cancer. Cancer Res. 2015 Aug 15;75(16):3209-15. doi: 10.1158/0008-5472.CAN-14-3042. PubMed PMID: 26122841; PMCID: PMC4537823.
Giguere R, Dolezal C, Bauermeister JA, Frasca T, Valladares J, Febo I, Cranston RD, Mayer K, McGowan I, Carballo-Diéguez A. Influence of Partner Type on Acceptability and Likelihood of Use of a Rectal Microbicide Among Young Men Who Have Sex With Men in the United States and Puerto Rico. J Sex Res. 2016 Jul-Aug;53(6):633-41. doi: 10.1080/00224499.2014.1002127. PubMed PMID: 26132717; PMCID: PMC4698091.
Ohkuri T, Ghosh A, Kosaka A, Sarkar SN, Okada H. Protective role of STING against gliomagenesis: Rational use of STING agonist in anti-glioma immunotherapy. Oncoimmunology. 2015 Apr;4(4):e999523. doi: 10.1080/2162402X.2014.999523. PubMed PMID: 26137417; PMCID: PMC4485761.
Pirrone GF, Emert-Sedlak LA, Wales TE, Smithgall TE, Kent MS, Engen JR. Membrane-Associated Conformation of HIV-1 Nef Investigated with Hydrogen Exchange Mass Spectrometry at a Langmuir Monolayer. Anal Chem. 2015 Jul 21;87(14):7030-5. doi: 10.1021/acs.analchem.5b01725. PubMed PMID: 26133569; PMCID: PMC4509969.
Polanco PM, Zenati MS, Hogg ME, Shakir M, Boone BA, Bartlett DL, Zeh HJ, Zureikat AH. An analysis of risk factors for pancreatic fistula after robotic pancreaticoduodenectomy: outcomes from a consecutive series of standardized pancreatic reconstructions. Surg Endosc. 2016 Apr;30(4):1523-9. doi: 10.1007/s00464-015-4366-8. PubMed PMID: 26139506.
Strange C, Senior RM, Sciurba F, O'Neal S, Morris A, Wisniewski SR, Bowler R, Hochheiser HS, Becich MJ, Zhang Y, Leader JK, Methé BA, Kaminski N, Sandhaus RA, GRADS Alpha-1 Study Group.. Rationale and Design of the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis Study. Alpha-1 Protocol. Ann Am Thorac Soc. 2015 Oct;12(10):1551-60. doi: 10.1513/AnnalsATS.201503-143OC. PubMed PMID: 26153726; PMCID: PMC4627425.
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He T, Brocca-Cofano E, Gillespie DG, Xu C, Stock JL, Ma D, Policicchio BB, Raehtz KD, Rinaldo CR, Apetrei C, Jackson EK, Macatangay BJ, Pandrea I. Critical Role for the Adenosine Pathway in Controlling Simian Immunodeficiency Virus-Related Immune Activation and Inflammation in Gut Mucosal Tissues. J Virol. 2015 Sep;89(18):9616-30. doi: 10.1128/JVI.01196-15. PubMed PMID: 26178986; PMCID: PMC4542384.
Dhar J, Cuevas RA, Goswami R, Zhu J, Sarkar SN, Barik S. 2'-5'-Oligoadenylate Synthetase-Like Protein Inhibits Respiratory Syncytial Virus Replication and Is Targeted by the Viral Nonstructural Protein 1. J Virol. 2015 Oct;89(19):10115-9. doi: 10.1128/JVI.01076-15. PubMed PMID: 26178980; PMCID: PMC4577923.
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Thomann S, Boscheinen JB, Vogel K, Knipe DM, DeLuca N, Gross S, Schuler-Thurner B, Schuster P, Schmidt B. Combined cytotoxic activity of an infectious, but non-replicative herpes simplex virus type 1 and plasmacytoid dendritic cells against tumour cells. Immunology. 2015 Oct;146(2):327-38. doi: 10.1111/imm.12509. PubMed PMID: 26194553; PMCID: PMC4582973.
Majima T, Funahashi Y, Takai S, Goins WF, Gotoh M, Tyagi P, Glorioso JC, Yoshimura N. Herpes Simplex Virus Vector-Mediated Gene Delivery of Poreless TRPV1 Channels Reduces Bladder Overactivity and Nociception in Rats. Hum Gene Ther. 2015 Nov;26(11):734-42. doi: 10.1089/hum.2015.026. PubMed PMID: 26204493; PMCID: PMC4651024.
Lee DH, Sung KS, Guo ZS, Kwon WT, Bartlett DL, Oh SC, Kwon YT, Lee YJ. TRAIL-Induced Caspase Activation Is a Prerequisite for Activation of the Endoplasmic Reticulum Stress-Induced Signal Transduction Pathways. J Cell Biochem. 2016 May;117(5):1078-91. doi: 10.1002/jcb.25289. PubMed PMID: 26212606.
Janocko L, Althouse AD, Brand RM, Cranston RD, McGowan I. The Molecular Characterization of Intestinal Explant HIV Infection Using Polymerase Chain Reaction-Based Techniques. AIDS Res Hum Retroviruses. 2015 Oct;31(10):981-91. doi: 10.1089/AID.2015.0165. PubMed PMID: 26214703; PMCID: PMC4576939.
Grover P, Shi H, Baumgartner M, Camacho CJ, Smithgall TE. Fluorescence Polarization Screening Assays for Small Molecule Allosteric Modulators of ABL Kinase Function. PLoS One. 2015;10(7):e0133590. doi: 10.1371/journal.pone.0133590. PubMed PMID: 26222440; PMCID: PMC4519180.
Hiruy H, Fuchs EJ, Marzinke MA, Bakshi RP, Breakey JC, Aung WS, Manohar M, Yue C, Caffo BS, Du Y, Abebe KZ, Spiegel HM, Rohan LC, McGowan I, Hendrix CW. A Phase 1 Randomized, Blinded Comparison of the Pharmacokinetics and Colonic Distribution of Three Candidate Rectal Microbicide Formulations of Tenofovir 1% Gel with Simulated Unprotected Sex (CHARM-02). AIDS Res Hum Retroviruses. 2015 Nov;31(11):1098-108. doi: 10.1089/AID.2015.0098. PubMed PMID: 26227279; PMCID: PMC4651050.
Dolezal C, Frasca T, Giguere R, Ibitoye M, Cranston RD, Febo I, Mayer KH, McGowan I, Carballo-Diéguez A. Awareness of Post-Exposure Prophylaxis (PEP) and Pre-Exposure Prophylaxis (PrEP) Is Low but Interest Is High Among Men Engaging in Condomless Anal Sex With Men in Boston, Pittsburgh, and San Juan. AIDS Educ Prev. 2015 Aug;27(4):289-97. doi: 10.1521/aeap.2015.27.4.289. PubMed PMID: 26241380; PMCID: PMC4610145.
Tao Y, Rotem A, Zhang H, Cockrell SK, Koehler SA, Chang CB, Ung LW, Cantalupo PG, Ren Y, Lin JS, Feldman AB, Wobus CE, Pipas JM, Weitz DA. Artifact-Free Quantification and Sequencing of Rare Recombinant Viruses by Using Drop-Based Microfluidics. Chembiochem. 2015 Oct 12;16(15):2167-71. doi: 10.1002/cbic.201500384. PubMed PMID: 26247541.
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Flores RR, Kim E, Zhou L, Yang C, Zhao J, Gambotto A, Robbins PD. IL-Y, a synthetic member of the IL-12 cytokine family, suppresses the development of type 1 diabetes in NOD mice. Eur J Immunol. 2015 Nov;45(11):3114-25. doi: 10.1002/eji.201445403. PubMed PMID: 26260044; PMCID: PMC4823813.
Hadebe S, Kirstein F, Fierens K, Chen K, Drummond RA, Vautier S, Sajaniemi S, Murray G, Williams DL, Redelinghuys P, Reinhart TA, Fallert Junecko BA, Kolls JK, Lambrecht BN, Brombacher F, Brown GD. Microbial Ligand Costimulation Drives Neutrophilic Steroid-Refractory Asthma. PLoS One. 2015;10(8):e0134219. doi: 10.1371/journal.pone.0134219. PubMed PMID: 26261989; PMCID: PMC4532492.
Balch GC, Bartlett DL. Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemotherapy (HIPEC): The Need for Accessible Data in Real Time. Ann Surg Oncol. 2016 Jan;23(1):9-11. doi: 10.1245/s10434-015-4777-8. PubMed PMID: 26265367.
Harris KG, Morosky SA, Drummond CG, Patel M, Kim C, Stolz DB, Bergelson JM, Cherry S, Coyne CB. RIP3 Regulates Autophagy and Promotes Coxsackievirus B3 Infection of Intestinal Epithelial Cells. Cell Host Microbe. 2015 Aug 12;18(2):221-32. doi: 10.1016/j.chom.2015.07.007. PubMed PMID: 26269957; PMCID: PMC4562276.
Krasinskas AM, Borczuk AC, Hartman DJ, Chabot JA, Taub RN, Mogal A, Pingpank J, Bartlett D, Dacic S. Prognostic significance of morphological growth patterns and mitotic index of epithelioid malignant peritoneal mesothelioma. Histopathology. 2016 Apr;68(5):729-37. doi: 10.1111/his.12807. PubMed PMID: 26272336.
Wiley CA, Bhardwaj N, Ross TM, Bissel SJ. Emerging Infections of CNS: Avian Influenza A Virus, Rift Valley Fever Virus and Human Parechovirus. Brain Pathol. 2015 Sep;25(5):634-50. doi: 10.1111/bpa.12281. PubMed PMID: 26276027; PMCID: PMC4538697.
Hanna MG, Parwani AV, Pantanowitz L, Punjabi V, Singh R. Smartphone applications: A contemporary resource for dermatopathology. J Pathol Inform. 2015;644. doi: 10.4103/2153-3539.161612. PubMed PMID: 26284155; PMCID: PMC4530504.
Downs-Canner S, Magge D, Ravindranathan R, O'Malley ME, Francis L, Liu Z, Sheng Guo Z, Obermajer N, Bartlett DL. Complement Inhibition: A Novel Form of Immunotherapy for Colon Cancer. Ann Surg Oncol. 2016 Feb;23(2):655-62. doi: 10.1245/s10434-015-4778-7. PubMed PMID: 26289805; PMCID: PMC5733728.
Wonderlich ER, Wu WC, Normolle DP, Barratt-Boyes SM. Macrophages and Myeloid Dendritic Cells Lose T Cell-Stimulating Function in Simian Immunodeficiency Virus Infection Associated with Diminished IL-12 and IFN-α Production. J Immunol. 2015 Oct 1;195(7):3284-92. doi: 10.4049/jimmunol.1500683. PubMed PMID: 26297760; PMCID: PMC4575859.
Garg AV, Amatya N, Chen K, Cruz JA, Grover P, Whibley N, Conti HR, Hernandez Mir G, Sirakova T, Childs EC, Smithgall TE, Biswas PS, Kolls JK, McGeachy MJ, Kolattukudy PE, Gaffen SL. MCPIP1 Endoribonuclease Activity Negatively Regulates Interleukin-17-Mediated Signaling and Inflammation. Immunity. 2015 Sep 15;43(3):475-87. doi: 10.1016/j.immuni.2015.07.021. PubMed PMID: 26320658; PMCID: PMC4575280.
Han HS, Cantalupo PG, Rotem A, Cockrell SK, Carbonnaux M, Pipas JM, Weitz DA. Whole-Genome Sequencing of a Single Viral Species from a Highly Heterogeneous Sample. Angew Chem Int Ed Engl. 2015 Nov 16;54(47):13985-8. doi: 10.1002/anie.201507047. PubMed PMID: 26316088; PMCID: PMC4715630.
Rhoads DD, Mathison BA, Bishop HS, da Silva AJ, Pantanowitz L. Review of Telemicrobiology. Arch Pathol Lab Med. 2016 Apr;140(4):362-70. doi: 10.5858/arpa.2015-0116-RA. PubMed PMID: 26317376; PMCID: PMC4808477.
Trejo Bittar HE, Pantanowitz L. Merkel Cell Polyomavirus is Not Detected in Lung Adenocarcinomas by Immunohistochemistry. Appl Immunohistochem Mol Morphol. 2016 Jul;24(6):427-30. doi: 10.1097/PAI.0000000000000210. PubMed PMID: 26317307.
Liu J, Li F, Ping Y, Wang L, Chen X, Wang D, Cao L, Zhao S, Li B, Kalinski P, Thorne SH, Zhang B, Zhang Y. Local production of the chemokines CCL5 and CXCL10 attracts CD8+ T lymphocytes into esophageal squamous cell carcinoma. Oncotarget. 2015 Sep 22;6(28):24978-89. doi: 10.18632/oncotarget.4617. PubMed PMID: 26317795; PMCID: PMC4694808.
Spencer S, Chung J, Thompson M, Piedra PA, Jewell A, Avadhanula V, Mei M, Jackson ML, Meece J, Sundaram M, Belongia EA, Cross R, Johnson E, Bullotta A, Rinaldo C, Gaglani M, Murthy K, Clipper L, Berman L, Flannery B. Factors associated with real-time RT-PCR cycle threshold values among medically attended influenza episodes. J Med Virol. 2016 Apr;88(4):719-23. doi: 10.1002/jmv.24373. PubMed PMID: 26334765.
Ping J, Lopes TJS, Nidom CA, Ghedin E, Macken CA, Fitch A, Imai M, Maher EA, Neumann G, Kawaoka Y. Development of high-yield influenza A virus vaccine viruses. Nat Commun. 2015 Sep 2;68148. doi: 10.1038/ncomms9148. PubMed PMID: 26334134; PMCID: PMC4569720.
Xing J, Radkay L, Monaco SE, Roth CG, Pantanowitz L. Cerebrospinal Fluid Cytology of Lyme Neuroborreliosis: A Report of 3 Cases with Literature Review. Acta Cytol. 2015;59(4):339-44. doi: 10.1159/000439160. PubMed PMID: 26343489.
Song X, Dilly AK, Choudry HA, Bartlett DL, Kwon YT, Lee YJ. Hypoxia Promotes Synergy between Mitomycin C and Bortezomib through a Coordinated Process of Bcl-xL Phosphorylation and Mitochondrial Translocation of p53. Mol Cancer Res. 2015 Dec;13(12):1533-43. doi: 10.1158/1541-7786.MCR-15-0237. PubMed PMID: 26354682; PMCID: PMC4684998.
Rossi F, Li X, Jacobson L, Levine AJ, Chen Y, Palella FJ, Margolick J, Viscidi R. BK virus capsid antibodies are associated with protection against subsequent development of PML in HIV-infected patients. Virology. 2015 Nov;485467-72. doi: 10.1016/j.virol.2015.08.022. PubMed PMID: 26356797; PMCID: PMC4619138.
Pan TJ, Pantanowitz L, Weiss KR. High-Grade Leiomyosarcoma Arising in a Previously Replanted Limb. Case Rep Oncol Med. 2015;2015172603. doi: 10.1155/2015/172603. PubMed PMID: 26366310; PMCID: PMC4561096.
Shu Q, Lennemann NJ, Sarkar SN, Sadovsky Y, Coyne CB. ADAP2 Is an Interferon Stimulated Gene That Restricts RNA Virus Entry. PLoS Pathog. 2015 Sep;11(9):e1005150. doi: 10.1371/journal.ppat.1005150. PubMed PMID: 26372645; PMCID: PMC4570769.
Hu M, Wang C, Li W, Lu W, Bai Z, Qin D, Yan Q, Zhu J, Krueger BJ, Renne R, Gao SJ, Lu C. A KSHV microRNA Directly Targets G Protein-Coupled Receptor Kinase 2 to Promote the Migration and Invasion of Endothelial Cells by Inducing CXCR2 and Activating AKT Signaling. PLoS Pathog. 2015 Sep;11(9):e1005171. doi: 10.1371/journal.ppat.1005171. PubMed PMID: 26402907; PMCID: PMC4581863.
Hartman DJ, Pantanowitz L. Safety Assurance Factors for Electronic Health Record Resilience (SAFER) Guidelines. Arch Pathol Lab Med. 2015 Oct;139(10):1201-4. doi: 10.5858/arpa.2015-0155-LE. PubMed PMID: 26414462.
Polanco PM, Ding Y, Knox JM, Ramalingam L, Jones H, Hogg ME, Zureikat AH, Holtzman MP, Pingpank J, Ahrendt S, Zeh HJ, Bartlett DL, Choudry HA. Outcomes of Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemoperfusion in Patients with High-Grade, High-Volume Disseminated Mucinous Appendiceal Neoplasms. Ann Surg Oncol. 2016 Feb;23(2):382-90. doi: 10.1245/s10434-015-4838-z. PubMed PMID: 26429720.
Dwyer J, Pantanowitz L, Ohori NP, Pai RK, Vrbin C, Brand RE, Monaco SE. Endoscopic ultrasound-guided FNA and ProCore biopsy in sampling pancreatic and intra-abdominal masses. Cancer Cytopathol. 2016 Feb;124(2):110-21. doi: 10.1002/cncy.21623. PubMed PMID: 26430767.
Mouillet JF, Ouyang Y, Coyne CB, Sadovsky Y. MicroRNAs in placental health and disease. Am J Obstet Gynecol. 2015 Oct;213(4 Suppl):S163-72. doi: 10.1016/j.ajog.2015.05.057. PubMed PMID: 26428496; PMCID: PMC4592520.
Venkatachari NJ, Zerbato JM, Jain S, Mancini AE, Chattopadhyay A, Sluis-Cremer N, Bar-Joseph Z, Ayyavoo V. Temporal transcriptional response to latency reversing agents identifies specific factors regulating HIV-1 viral transcriptional switch. Retrovirology. 2015 Oct 6;1285. doi: 10.1186/s12977-015-0211-3. PubMed PMID: 26438393; PMCID: PMC4594640.
Wales TE, Hochrein JM, Morgan CR, Emert-Sedlak LA, Smithgall TE, Engen JR. Subtle Dynamic Changes Accompany Hck Activation by HIV-1 Nef and are Reversed by an Antiretroviral Kinase Inhibitor. Biochemistry. 2015 Oct 20;54(41):6382-91. doi: 10.1021/acs.biochem.5b00875. PubMed PMID: 26440750; PMCID: PMC4615603.
Day JD, Metes DM, Vodovotz Y. Mathematical Modeling of Early Cellular Innate and Adaptive Immune Responses to Ischemia/Reperfusion Injury and Solid Organ Allotransplantation. Front Immunol. 2015;6484. doi: 10.3389/fimmu.2015.00484. PubMed PMID: 26441988; PMCID: PMC4585194.
Yao S, Hu M, Hao T, Li W, Xue X, Xue M, Zhu X, Zhou F, Qin D, Yan Q, Zhu J, Gao SJ, Lu C. MiRNA-891a-5p mediates HIV-1 Tat and KSHV Orf-K1 synergistic induction of angiogenesis by activating NF-κB signaling. Nucleic Acids Res. 2015 Oct 30;43(19):9362-78. doi: 10.1093/nar/gkv988. PubMed PMID: 26446987; PMCID: PMC4627096.
Koharudin LM, Debiec KT, Gronenborn AM. Structural Insight into Fungal Cell Wall Recognition by a CVNH Protein with a Single LysM Domain. Structure. 2015 Nov 3;23(11):2143-54. doi: 10.1016/j.str.2015.07.023. PubMed PMID: 26455798; PMCID: PMC4635050.
Wiley CA, Bissel SJ, Murdoch GH. Role of CHI3L1 in neuroinflammation. Clin Immunol. 2015 Dec;161(2):354. doi: 10.1016/j.clim.2015.10.003. PubMed PMID: 26477483.
Singhi AD, Krasinskas AM, Choudry HA, Bartlett DL, Pingpank JF, Zeh HJ, Luvison A, Fuhrer K, Bahary N, Seethala RR, Dacic S. The prognostic significance of BAP1, NF2, and CDKN2A in malignant peritoneal mesothelioma. Mod Pathol. 2016 Jan;29(1):14-24. doi: 10.1038/modpathol.2015.121. PubMed PMID: 26493618.
Shuda M, Chang Y, Moore PS. Mitotic 4E-BP1 hyperphosphorylation and cap-dependent translation. Cell Cycle. 2015;14(19):3005-6. doi: 10.1080/15384101.2015.1084192. PubMed PMID: 26496165; PMCID: PMC4825615.
Harris KG, Coyne CB. Unc93b Induces Apoptotic Cell Death and Is Cleaved by Host and Enteroviral Proteases. PLoS One. 2015;10(10):e0141383. doi: 10.1371/journal.pone.0141383. PubMed PMID: 26509685; PMCID: PMC4624986.
Matei E, Gronenborn AM. (19)F Paramagnetic Relaxation Enhancement: A Valuable Tool for Distance Measurements in Proteins. Angew Chem Int Ed Engl. 2016 Jan 4;55(1):150-4. doi: 10.1002/anie.201508464. PubMed PMID: 26510989; PMCID: PMC4715678.
Gupta T, Robles MT, Schowalter RM, Buck CB, Pipas JM. Expression of the small T antigen of Lymphotropic Papovavirus is sufficient to transform primary mouse embryo fibroblasts. Virology. 2016 Jan;487112-20. doi: 10.1016/j.virol.2015.10.003. PubMed PMID: 26517398; PMCID: PMC4679568.
Shuda M, Guastafierro A, Geng X, Shuda Y, Ostrowski SM, Lukianov S, Jenkins FJ, Honda K, Maricich SM, Moore PS, Chang Y. Merkel Cell Polyomavirus Small T Antigen Induces Cancer and Embryonic Merkel Cell Proliferation in a Transgenic Mouse Model. PLoS One. 2015;10(11):e0142329. doi: 10.1371/journal.pone.0142329. PubMed PMID: 26544690; PMCID: PMC4636375.
Colgrove RC, Liu X, Griffiths A, Raja P, Deluca NA, Newman RM, Coen DM, Knipe DM. History and genomic sequence analysis of the herpes simplex virus 1 KOS and KOS1.1 sub-strains. Virology. 2016 Jan;487215-21. doi: 10.1016/j.virol.2015.09.026. PubMed PMID: 26547038; PMCID: PMC4679709.
Chapman BV, Wald AI, Akhtar P, Munko AC, Xu J, Gibson SP, Grandis JR, Ferris RL, Khan SA. MicroRNA-363 targets myosin 1B to reduce cellular migration in head and neck cancer. BMC Cancer. 2015 Nov 6;15861. doi: 10.1186/s12885-015-1888-3. PubMed PMID: 26545583; PMCID: PMC4635687.
Swan ZD, Wonderlich ER, Barratt-Boyes SM. Macrophage accumulation in gut mucosa differentiates AIDS from chronic SIV infection in rhesus macaques. Eur J Immunol. 2016 Feb;46(2):446-54. doi: 10.1002/eji.201545738. PubMed PMID: 26549608; PMCID: PMC5751443.
Lu M, Hou G, Zhang H, Suiter CL, Ahn J, Byeon IJ, Perilla JR, Langmead CJ, Hung I, Gor'kov PL, Gan Z, Brey W, Aiken C, Zhang P, Schulten K, Gronenborn AM, Polenova T. Dynamic allostery governs cyclophilin A-HIV capsid interplay. Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):14617-22. doi: 10.1073/pnas.1516920112. PubMed PMID: 26553990; PMCID: PMC4664340.
Cranston RD, Althouse AD, van Griensven F, Janocko L, Curlin ME, Chaikummao S, Chonwattana W, Siegel A, Holtz TH, McGowan I. Prevalence of Anal Human Papillomavirus Vaccine Types in the Bangkok Men Who Have Sex With Men Cohort Study. Sex Transm Dis. 2015 Dec;42(12):671-6. doi: 10.1097/OLQ.0000000000000372. PubMed PMID: 26562695.
Sharaf NG, Gronenborn AM. (19)F-modified proteins and (19)F-containing ligands as tools in solution NMR studies of protein interactions. Methods Enzymol. 2015;56567-95. doi: 10.1016/bs.mie.2015.05.014. PubMed PMID: 26577728.
Dilly AK, Lee YJ, Zeh HJ, Guo ZS, Bartlett DL, Choudry HA. Targeting hypoxia-mediated mucin 2 production as a therapeutic strategy for mucinous tumors. Transl Res. 2016 Mar;16919-30.e1. doi: 10.1016/j.trsl.2015.10.006. PubMed PMID: 26589109.
Jain S, Palekar A, Monaco SE, Craig FE, Bejjani G, Pantanowitz L. Human Immunodeficiency Virus-associated primary effusion lymphoma: An exceedingly rare entity in cerebrospinal fluid. Cytojournal. 2015;1222. doi: 10.4103/1742-6413.168059. PubMed PMID: 26604975; PMCID: PMC4630777.
Huet A, Duda RL, Hendrix RW, Boulanger P, Conway JF. Correct Assembly of the Bacteriophage T5 Procapsid Requires Both the Maturation Protease and the Portal Complex. J Mol Biol. 2016 Jan 16;428(1):165-181. doi: 10.1016/j.jmb.2015.11.019. PubMed PMID: 26616586; PMCID: PMC4738002.
Cox RG, Mainou BA, Johnson M, Hastings AK, Schuster JE, Dermody TS, Williams JV. Human Metapneumovirus Is Capable of Entering Cells by Fusion with Endosomal Membranes. PLoS Pathog. 2015 Dec;11(12):e1005303. doi: 10.1371/journal.ppat.1005303. PubMed PMID: 26629703; PMCID: PMC4667933.
Macatangay BJ, Riddler SA, Wheeler ND, Spindler J, Lawani M, Hong F, Buffo MJ, Whiteside TL, Kearney MF, Mellors JW, Rinaldo CR. Therapeutic Vaccination With Dendritic Cells Loaded With Autologous HIV Type 1-Infected Apoptotic Cells. J Infect Dis. 2016 May 1;213(9):1400-9. doi: 10.1093/infdis/jiv582. PubMed PMID: 26647281; PMCID: PMC4813736.
Kuniholm MH, Ong E, Hogema BM, Koppelman M, Anastos K, Peters MG, Seaberg EC, Chen Y, Nelson KE, Linnen JM. Acute and Chronic Hepatitis E Virus Infection in Human Immunodeficiency Virus-Infected U.S. Women. Hepatology. 2016 Mar;63(3):712-20. doi: 10.1002/hep.28384. PubMed PMID: 26646162; PMCID: PMC4764464.
Carbone A, Pantanowitz L. TAFRO syndrome: An atypical variant of KSHV-negative multicentric Castleman disease. Am J Hematol. 2016 Feb;91(2):171-2. doi: 10.1002/ajh.24274. PubMed PMID: 26663467.
DʼSouza G, Wentz A, Wiley D, Shah N, Barrington F, Darragh TM, Joste N, Plankey M, Reddy S, Breen EC, Young S, Cranston RD. Anal Cancer Screening in Men Who Have Sex With Men in the Multicenter AIDS Cohort Study. J Acquir Immune Defic Syndr. 2016 Apr 15;71(5):570-6. doi: 10.1097/QAI.0000000000000910. PubMed PMID: 26656784; PMCID: PMC4788521.
Abdelbaqi S, Deslouches B, Steckbeck J, Montelaro R, Reed DS. Novel engineered cationic antimicrobial peptides display broad-spectrum activity against Francisella tularensis, Yersinia pestis and Burkholderia pseudomallei. J Med Microbiol. 2016 Feb;65(2):188-194. doi: 10.1099/jmm.0.000209. PubMed PMID: 26673248.
McDermott SP, Pantanowitz L, Nikiforova M, Monaco SE. Quantitative assessment of cell block cellularity and correlation with molecular testing adequacy in lung cancer. J Am Soc Cytopathol. 2016 Jul - Aug;5(4):196-202. doi: 10.1016/j.jasc.2015.11.001. PubMed PMID: 31042509.
Poon LL, Song T, Rosenfeld R, Lin X, Rogers MB, Zhou B, Sebra R, Halpin RA, Guan Y, Twaddle A, DePasse JV, Stockwell TB, Wentworth DE, Holmes EC, Greenbaum B, Peiris JS, Cowling BJ, Ghedin E. Quantifying influenza virus diversity and transmission in humans. Nat Genet. 2016 Feb;48(2):195-200. doi: 10.1038/ng.3479. PubMed PMID: 26727660; PMCID: PMC4731279.
Hendricks MR, Lashua LP, Fischer DK, Flitter BA, Eichinger KM, Durbin JE, Sarkar SN, Coyne CB, Empey KM, Bomberger JM. Respiratory syncytial virus infection enhances Pseudomonas aeruginosa biofilm growth through dysregulation of nutritional immunity. Proc Natl Acad Sci U S A. 2016 Feb 9;113(6):1642-7. doi: 10.1073/pnas.1516979113. PubMed PMID: 26729873; PMCID: PMC4760822.
Zhao C, Wu T, Ding X, Parwani AV, Chen H, McHugh J, Piccoli A, Xie Q, Lauro GR, Feng X, Hartman DJ, Seethala RR, Wu S, Yousem S, Liang Y, Pantanowitz L. International telepathology consultation: Three years of experience between the University of Pittsburgh Medical Center and KingMed Diagnostics in China. J Pathol Inform. 2015;663. doi: 10.4103/2153-3539.170650. PubMed PMID: 26730353; PMCID: PMC4687159.
Turaga KK, Gamblin TC, Alexander HR, Edwards R, Bartlett DL. Regional Therapies for Advanced Cancer: Update for 2016. Ann Surg Oncol. 2016 May;23(5):1452-3. doi: 10.1245/s10434-015-5068-0. PubMed PMID: 26732273.
Liu X, Hillwig ML, Koharudin LM, Gronenborn AM. Unified biogenesis of ambiguine, fischerindole, hapalindole and welwitindolinone: identification of a monogeranylated indolenine as a cryptic common biosynthetic intermediate by an unusual magnesium-dependent aromatic prenyltransferase. Chem Commun (Camb). 2016 Jan 28;52(8):1737-40. doi: 10.1039/c5cc10060g. PubMed PMID: 26740122; PMCID: PMC4720564.
Wagner PL, Austin F, Zenati M, Jaech A, Mavanur A, Ramalingam L, Jones HL, Holtzman MP, Ahrendt SA, Zureikat AH, Pingpank JF, Zeh HJ, Bartlett DL, Choudry HA. Oncologic Risk Stratification Following Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemotherapy for Appendiceal Carcinomatosis. Ann Surg Oncol. 2016 May;23(5):1587-93. doi: 10.1245/s10434-015-5037-7. PubMed PMID: 26744106.
Guha D, Mancini A, Sparks J, Ayyavoo V. HIV-1 Infection Dysregulates Cell Cycle Regulatory Protein p21 in CD4+ T Cells Through miR-20a and miR-106b Regulation. J Cell Biochem. 2016 Aug;117(8):1902-12. doi: 10.1002/jcb.25489. PubMed PMID: 26755399.
Lyon TD, Turner Ii RM, Nikonow TN, Wang L, Uy J, Ramalingam L, Holtzman MP, Pingpank JF, Bartlett DL, Davies BJ. Effect of a concomitant urologic procedure on outcomes following cytoreductive surgery with hyperthermic intraperitoneal chemotherapy. J Surg Oncol. 2016 Feb;113(2):218-22. doi: 10.1002/jso.24115. PubMed PMID: 26775909.
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Zhang X, Rao A, Sette P, Deibert C, Pomerantz A, Kim WJ, Kohanbash G, Chang Y, Park Y, Engh J, Choi J, Chan T, Okada H, Lotze M, Grandi P, Amankulor N. IDH mutant gliomas escape natural killer cell immune surveillance by downregulation of NKG2D ligand expression. Neuro Oncol. 2016 Oct;18(10):1402-12. doi: 10.1093/neuonc/now061. PubMed PMID: 27116977; PMCID: PMC5035522.
King JC, Zeh HJ 3rd, Zureikat AH, Celebrezze J, Holtzman MP, Stang ML, Tsung A, Bartlett DL, Hogg ME. Safety in Numbers: Progressive Implementation of a Robotics Program in an Academic Surgical Oncology Practice. Surg Innov. 2016 Aug;23(4):407-14. doi: 10.1177/1553350616646479. PubMed PMID: 27130645.
Frasca T, Giguere R, Ibitoye M, Dolezal C, Febo I, Cranston RD, Mayer K, McGowan I, Carballo-Diéguez A. Lessons for Rectal Microbicide Development From an Acceptability Trial of a Placebo Gel Applied Prior to Receptive Anal Intercourse. Arch Sex Behav. 2017 May;46(4):1101-1109. doi: 10.1007/s10508-016-0735-1. PubMed PMID: 27129533; PMCID: PMC5086303.
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Sankapal S, Gupta P, Ratner D, Ding M, Shen C, Sanyal A, Stolz D, Cu-Uvin S, Ramratnam B, Chen Y. HIV Exposure to the Epithelia in Ectocervical and Colon Tissues Induces Inflammatory Cytokines Without Tight Junction Disruption. AIDS Res Hum Retroviruses. 2016 Oct/Nov;32(10-11):1054-1066. doi: 10.1089/AID.2015.0185. PubMed PMID: 27153934; PMCID: PMC5067867.
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Pham HV, Pantanowitz L, Liu Y. Quantitative phase imaging to improve the diagnostic accuracy of urine cytology. Cancer Cytopathol. 2016 Sep;124(9):641-50. doi: 10.1002/cncy.21734. PubMed PMID: 27177072; PMCID: PMC5026558.
Gearhart TL, Montelaro RC, Schurdak ME, Pilcher CD, Rinaldo CR, Kodadek T, Park Y, Islam K, Yurko R, Marques ET Jr, Burke DS. Selection of a potential diagnostic biomarker for HIV infection from a random library of non-biological synthetic peptoid oligomers. J Immunol Methods. 2016 Aug;43585-9. doi: 10.1016/j.jim.2016.05.001. PubMed PMID: 27182050; PMCID: PMC4947968.
Song X, Hong SH, Kwon WT, Bailey LM, Basse P, Bartlett DL, Kwon YT, Lee YJ. Secretory TRAIL-Armed Natural Killer Cell-Based Therapy: In Vitro and In Vivo Colorectal Peritoneal Carcinomatosis Xenograft. Mol Cancer Ther. 2016 Jul;15(7):1591-601. doi: 10.1158/1535-7163.MCT-15-0937. PubMed PMID: 27196776; PMCID: PMC4936937.
Downs-Canner S, Guo ZS, Ravindranathan R, Breitbach CJ, O'Malley ME, Jones HL, Moon A, McCart JA, Shuai Y, Zeh HJ, Bartlett DL. Phase 1 Study of Intravenous Oncolytic Poxvirus (vvDD) in Patients With Advanced Solid Cancers. Mol Ther. 2016 Aug;24(8):1492-501. doi: 10.1038/mt.2016.101. PubMed PMID: 27203445; PMCID: PMC5023393.
Xing J, Rodriguez EF, Monaco SE, Pantanowitz L. Cytopathology of Hepatobiliary-Related Actinomycosis. Acta Cytol. 2016;60(2):179-84. doi: 10.1159/000445971. PubMed PMID: 27199159.
Pradhan D, Monaco SE, Parwani AV, Ahmed I, Duboy J, Pantanowitz L. Evaluation of panoramic digital images using Panoptiq for frozen section diagnosis. J Pathol Inform. 2016;726. doi: 10.4103/2153-3539.181770. PubMed PMID: 27217976; PMCID: PMC4872477.
Guo H, Birsa J, Farahani N, Hartman DJ, Piccoli A, O'Leary M, McHugh J, Nyman M, Stratman C, Kvarnstrom V, Yousem S, Pantanowitz L. Digital pathology and anatomic pathology laboratory information system integration to support digital pathology sign-out. J Pathol Inform. 2016;723. doi: 10.4103/2153-3539.181767. PubMed PMID: 27217973; PMCID: PMC4872480.
Farahani N, Post R, Duboy J, Ahmed I, Kolowitz BJ, Krinchai T, Monaco SE, Fine JL, Hartman DJ, Pantanowitz L. Exploring virtual reality technology and the Oculus Rift for the examination of digital pathology slides. J Pathol Inform. 2016;722. doi: 10.4103/2153-3539.181766. PubMed PMID: 27217972; PMCID: PMC4872484.
Pantanowitz L, Glassy E. Commentary: Has pathology gone to the "birds" because we have just been "winging" it? J Pathol Inform. 2016;719. doi: 10.4103/2153-3539.181763. PubMed PMID: 27217969; PMCID: PMC4872482.
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Drummond CG, Nickerson CA, Coyne CB. A Three-Dimensional Cell Culture Model To Study Enterovirus Infection of Polarized Intestinal Epithelial Cells. mSphere. 2016 Jan-Feb;1(1): doi: 10.1128/mSphere.00030-15. PubMed PMID: 27303677; PMCID: PMC4863623.
Melvin JA, Lashua LP, Kiedrowski MR, Yang G, Deslouches B, Montelaro RC, Bomberger JM. Simultaneous Antibiofilm and Antiviral Activities of an Engineered Antimicrobial Peptide during Virus-Bacterium Coinfection. mSphere. 2016 May-Jun;1(3): doi: 10.1128/mSphere.00083-16. PubMed PMID: 27303744; PMCID: PMC4888888.
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Ganapathiraju MK, Thahir M, Handen A, Sarkar SN, Sweet RA, Nimgaonkar VL, Loscher CE, Bauer EM, Chaparala S. Schizophrenia interactome with 504 novel protein-protein interactions. NPJ Schizophr. 2016;216012. doi: 10.1038/npjschz.2016.12. PubMed PMID: 27336055; PMCID: PMC4898894.
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Zhang Y, Waterboer T, Pawlita M, Sugar E, Minkoff H, Cranston RD, Wiley D, Burk R, Reddy S, Margolick J, Strickler H, Weber K, Gillison M, D'Souza G. Human Papillomavirus (HPV) 16 E6 seropositivity is elevated in subjects with oral HPV16 infection. Cancer Epidemiol. 2016 Aug;4330-4. doi: 10.1016/j.canep.2016.06.002. PubMed PMID: 27344614; PMCID: PMC4963265.
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Reinhart B, Goins WF, Harel A, Chaudhry S, Goss JR, Yoshimura N, de Groat WC, Cohen JB, Glorioso JC. An HSV-based library screen identifies PP1α as a negative TRPV1 regulator with analgesic activity in models of pain. Mol Ther Methods Clin Dev. 2016;316040. doi: 10.1038/mtm.2016.40. PubMed PMID: 27382601; PMCID: PMC4916946.
Henricks WH, Karcher DS, Harrison JH Jr, Sinard JH, Riben MW, Boyer PJ, Plath S, Thompson A, Pantanowitz L. Pathology Informatics Essentials for Residents: A Flexible Informatics Curriculum Linked to Accreditation Council for Graduate Medical Education Milestones. Arch Pathol Lab Med. 2017 Jan;141(1):113-124. doi: 10.5858/arpa.2016-0199-OA. PubMed PMID: 27383543.
Yergiyev O, Garib G, Schoedel K, Palekar A, Bartlett D, Rao UNM. CDK8 Expression in Extrauterine Leiomyosarcoma Correlates With Tumor Stage and Progression. Appl Immunohistochem Mol Morphol. 2018 Mar;26(3):161-164. doi: 10.1097/PAI.0000000000000409. PubMed PMID: 27389556.
Morris A, Paulson JN, Talukder H, Tipton L, Kling H, Cui L, Fitch A, Pop M, Norris KA, Ghedin E. Longitudinal analysis of the lung microbiota of cynomolgous macaques during long-term SHIV infection. Microbiome. 2016 Jul 8;4(1):38. doi: 10.1186/s40168-016-0183-0. PubMed PMID: 27391224; PMCID: PMC4939015.
Debiec KT, Cerutti DS, Baker LR, Gronenborn AM, Case DA, Chong LT. Further along the Road Less Traveled: AMBER ff15ipq, an Original Protein Force Field Built on a Self-Consistent Physical Model. J Chem Theory Comput. 2016 Aug 9;12(8):3926-47. doi: 10.1021/acs.jctc.6b00567. PubMed PMID: 27399642; PMCID: PMC4980686.
Xing J, Manos S, Monaco SE, Wilson DO, Pantanowitz L. Endobronchial Ultrasound-Guided Transbronchial Needle Aspiration: A Pilot Study to Evaluate the Utility of the ProCore Biopsy Needle for Lymph Node Sampling. Acta Cytol. 2016;60(3):254-9. doi: 10.1159/000446761. PubMed PMID: 27400235.
Velásquez C, Cheng E, Shuda M, Lee-Oesterreich PJ, Pogge von Strandmann L, Gritsenko MA, Jacobs JM, Moore PS, Chang Y. Mitotic protein kinase CDK1 phosphorylation of mRNA translation regulator 4E-BP1 Ser83 may contribute to cell transformation. Proc Natl Acad Sci U S A. 2016 Jul 26;113(30):8466-71. doi: 10.1073/pnas.1607768113. PubMed PMID: 27402756; PMCID: PMC4968757.
Matei E, Basu R, Furey W, Shi J, Calnan C, Aiken C, Gronenborn AM. Structure and Glycan Binding of a New Cyanovirin-N Homolog. J Biol Chem. 2016 Sep 2;291(36):18967-76. doi: 10.1074/jbc.M116.740415. PubMed PMID: 27402833; PMCID: PMC5009269.
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Adibi JJ, Zhao Y, Cartus AR, Gupta P, Davidson LA. Placental Mechanics in the Zika-Microcephaly Relationship. Cell Host Microbe. 2016 Jul 13;20(1):9-11. doi: 10.1016/j.chom.2016.06.013. PubMed PMID: 27414496.
Dhir M, Jones HL, Shuai Y, Clifford AK, Perkins S, Steve J, Hogg ME, Choudry MH, Pingpank JF, Holtzman MP, Zeh HJ 3rd, Bahary N, Bartlett DL, Zureikat AH. Hepatic Arterial Infusion in Combination with Modern Systemic Chemotherapy is Associated with Improved Survival Compared with Modern Systemic Chemotherapy Alone in Patients with Isolated Unresectable Colorectal Liver Metastases: A Case-Control Study. Ann Surg Oncol. 2017 Jan;24(1):150-158. doi: 10.1245/s10434-016-5418-6. PubMed PMID: 27431415.
Hogg ME, Zenati M, Novak S, Chen Y, Jun Y, Steve J, Kowalsky SJ, Bartlett DL, Zureikat AH, Zeh HJ 3rd. Grading of Surgeon Technical Performance Predicts Postoperative Pancreatic Fistula for Pancreaticoduodenectomy Independent of Patient-related Variables. Ann Surg. 2016 Sep;264(3):482-91. doi: 10.1097/SLA.0000000000001862. PubMed PMID: 27433897.
Laemmle LL, Cohen JB, Glorioso JC. Constitutive Expression of GATA4 Dramatically Increases the Cardiogenic Potential of D3 Mouse Embryonic Stem Cells. Open Biotechnol J. 2016;10248-257. doi: 10.2174/1874070701610010248. PubMed PMID: 27441042; PMCID: PMC4948750.
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Roy S, Pfeifer JD, LaFramboise WA, Pantanowitz L. Molecular digital pathology: progress and potential of exchanging molecular data. Expert Rev Mol Diagn. 2016 Sep;16(9):941-7. doi: 10.1080/14737159.2016.1206472. PubMed PMID: 27471996.
Pastrana CL, Carrasco C, Akhtar P, Leuba SH, Khan SA, Moreno-Herrero F. Force and twist dependence of RepC nicking activity on torsionally-constrained DNA molecules. Nucleic Acids Res. 2016 Oct 14;44(18):8885-8896. doi: 10.1093/nar/gkw689. PubMed PMID: 27488190; PMCID: PMC5062986.
Dhir M, Magge D, Novak S, Bartlett DL, Zureikat AH. Robotic-Assisted Placement of an Hepatic Artery Infusion Pump and Catheter for Regional Chemotherapy of the Liver. Ann Surg Oncol. 2016 Dec;23(Suppl 5):755-756. doi: 10.1245/s10434-016-5484-9. PubMed PMID: 27495280.
Ocuin LM, Miller-Ocuin JL, Novak SM, Bartlett DL, Marsh JW, Tsung A, Lee KK, Hogg ME, Zeh HJ, Zureikat AH. Robotic and open distal pancreatectomy with celiac axis resection for locally advanced pancreatic body tumors: a single institutional assessment of perioperative outcomes and survival. HPB (Oxford). 2016 Oct;18(10):835-842. doi: 10.1016/j.hpb.2016.05.003. PubMed PMID: 27506992; PMCID: PMC5060290.
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Organtini LJ, Lee H, Iketani S, Huang K, Ashley RE, Makhov AM, Conway JF, Parrish CR, Hafenstein S. Near-Atomic Resolution Structure of a Highly Neutralizing Fab Bound to Canine Parvovirus. J Virol. 2016 Nov 1;90(21):9733-9742. doi: 10.1128/JVI.01112-16. PubMed PMID: 27535057; PMCID: PMC5068525.
Kessler MC, Jackson E, Newsome JT. Response to Protocol Review Scenario: Loose lips can sink ships-and potentially careers and institutions. Lab Anim (NY). 2016 Aug 23;45(9):328-9. doi: 10.1038/laban.1089. PubMed PMID: 27551799.
Henricks WH, Karcher DS, Harrison JH, Sinard JH, Riben MW, Boyer PJ, Plath S, Thompson A, Pantanowitz L. Pathology Informatics Essentials for Residents: A flexible informatics curriculum linked to Accreditation Council for Graduate Medical Education milestones. J Pathol Inform. 2016;727. doi: 10.4103/2153-3539.185673. PubMed PMID: 27563486; PMCID: PMC4977974.
Wu Y, Zhou X, Barnes CO, DeLucia M, Cohen AE, Gronenborn AM, Ahn J, Calero G. The DDB1-DCAF1-Vpr-UNG2 crystal structure reveals how HIV-1 Vpr steers human UNG2 toward destruction. Nat Struct Mol Biol. 2016 Oct;23(10):933-940. doi: 10.1038/nsmb.3284. PubMed PMID: 27571178; PMCID: PMC5385928.
Kermanshahi TR, Magge D, Choudry H, Ramalingam L, Zhu B, Pingpank J, Ahrendt S, Holtzman M, Zeh H, Bartlett D, Zureikat A, Pai RK. Mucinous and Signet Ring Cell Differentiation Affect Patterns of Metastasis in Colorectal Carcinoma and Influence Survival. Int J Surg Pathol. 2017 Apr;25(2):108-117. doi: 10.1177/1066896916664990. PubMed PMID: 27571790.
Lee H, Shingler KL, Organtini LJ, Ashley RE, Makhov AM, Conway JF, Hafenstein S. The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs. Sci Adv. 2016 Aug;2(8):e1501929. doi: 10.1126/sciadv.1501929. PubMed PMID: 27574701; PMCID: PMC4996645.
Coyne CB, Lazear HM. Zika virus - reigniting the TORCH. Nat Rev Microbiol. 2016 Nov;14(11):707-715. doi: 10.1038/nrmicro.2016.125. PubMed PMID: 27573577.
Segal LN, Clemente JC, Tsay JC, Koralov SB, Keller BC, Wu BG, Li Y, Shen N, Ghedin E, Morris A, Diaz P, Huang L, Wikoff WR, Ubeda C, Artacho A, Rom WN, Sterman DH, Collman RG, Blaser MJ, Weiden MD. Enrichment of the lung microbiome with oral taxa is associated with lung inflammation of a Th17 phenotype. Nat Microbiol. 2016 Apr 4;116031. doi: 10.1038/nmicrobiol.2016.31. PubMed PMID: 27572644; PMCID: PMC5010013.
Silowash R, Pantanowitz L, Craig FE, Simons JP, Monaco SE. Utilization of Flow Cytometry in Pediatric Fine-Needle Aspiration Biopsy Specimens. Acta Cytol. 2016;60(4):344-353. doi: 10.1159/000448510. PubMed PMID: 27592067.
Goins WF, Hall B, Cohen JB, Glorioso JC. Retargeting of herpes simplex virus (HSV) vectors. Curr Opin Virol. 2016 Dec;2193-101. doi: 10.1016/j.coviro.2016.08.007. PubMed PMID: 27614209; PMCID: PMC5138136.
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Whitley MJ, Xi Z, Bartko JC, Jensen MR, Blackledge M, Gronenborn AM. A Combined NMR and SAXS Analysis of the Partially Folded Cataract-Associated V75D γD-Crystallin. Biophys J. 2017 Mar 28;112(6):1135-1146. doi: 10.1016/j.bpj.2017.02.010. PubMed PMID: 28355541; PMCID: PMC5376099.
Kang R, Xie Y, Zhang Q, Hou W, Jiang Q, Zhu S, Liu J, Zeng D, Wang H, Bartlett DL, Billiar TR, Zeh HJ 3rd, Lotze MT, Tang D. Intracellular HMGB1 as a novel tumor suppressor of pancreatic cancer. Cell Res. 2017 Jul;27(7):916-932. doi: 10.1038/cr.2017.51. PubMed PMID: 28374746; PMCID: PMC5518983.
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Evans AJ, Salama ME, Henricks WH, Pantanowitz L. Implementation of Whole Slide Imaging for Clinical Purposes: Issues to Consider From the Perspective of Early Adopters. Arch Pathol Lab Med. 2017 Jul;141(7):944-959. doi: 10.5858/arpa.2016-0074-OA. PubMed PMID: 28440660.
Boyette LB, Macedo C, Hadi K, Elinoff BD, Walters JT, Ramaswami B, Chalasani G, Taboas JM, Lakkis FG, Metes DM. Phenotype, function, and differentiation potential of human monocyte subsets. PLoS One. 2017;12(4):e0176460. doi: 10.1371/journal.pone.0176460. PubMed PMID: 28445506; PMCID: PMC5406034.
Kwun HJ, Chang Y, Moore PS. Protein-mediated viral latency is a novel mechanism for Merkel cell polyomavirus persistence. Proc Natl Acad Sci U S A. 2017 May 16;114(20):E4040-E4047. doi: 10.1073/pnas.1703879114. PubMed PMID: 28461484; PMCID: PMC5441811.
Verlengia G, Miyagawa Y, Ingusci S, Cohen JB, Simonato M, Glorioso JC. Engineered HSV vector achieves safe long-term transgene expression in the central nervous system. Sci Rep. 2017 May 4;7(1):1507. doi: 10.1038/s41598-017-01635-1. PubMed PMID: 28473703; PMCID: PMC5431452.
Boatz JC, Whitley MJ, Li M, Gronenborn AM, van der Wel PCA. Cataract-associated P23T γD-crystallin retains a native-like fold in amorphous-looking aggregates formed at physiological pH. Nat Commun. 2017 May 5;815137. doi: 10.1038/ncomms15137. PubMed PMID: 28474685; PMCID: PMC5424181.
Ho J, Pantanowitz L. Making Pathology Diagnoses with Glass or Digital Slides: Which Modality is Inferior? J Pathol Inform. 2017;814. doi: 10.4103/jpi.jpi_10_17. PubMed PMID: 28480117; PMCID: PMC5404353.
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Huffman JB, Daniel GR, Falck-Pedersen E, Huet A, Smith GA, Conway JF, Homa FL. The C Terminus of the Herpes Simplex Virus UL25 Protein Is Required for Release of Viral Genomes from Capsids Bound to Nuclear Pores. J Virol. 2017 Aug 1;91(15): doi: 10.1128/JVI.00641-17. PubMed PMID: 28490590; PMCID: PMC5512264.
Arora N, Sadovsky Y, Dermody TS, Coyne CB. Microbial Vertical Transmission during Human Pregnancy. Cell Host Microbe. 2017 May 10;21(5):561-567. doi: 10.1016/j.chom.2017.04.007. PubMed PMID: 28494237; PMCID: PMC6148370.
Wiley CA, Chimelli L. Human Zika and West Nile virus neurological infections: What is the difference? Neuropathology. 2017 Oct;37(5):393-397. doi: 10.1111/neup.12385. PubMed PMID: 28493351.
Heming JD, Conway JF, Homa FL. Herpesvirus Capsid Assembly and DNA Packaging. Adv Anat Embryol Cell Biol. 2017;223119-142. doi: 10.1007/978-3-319-53168-7_6. PubMed PMID: 28528442; PMCID: PMC5548147.
John I, Bartlett DL, Rao UNM. Radiation-Induced Glandular Malignant Peripheral Nerve Sheath Tumor. Int J Surg Pathol. 2017 Oct;25(7):635-639. doi: 10.1177/1066896917710718. PubMed PMID: 28530162.
Goéré D, Passot G, Gelli M, Levine EA, Bartlett DL, Sugarbaker PH, Glehen O. Complete cytoreductive surgery plus HIPEC for peritoneal metastases from unusual cancer sites of origin: results from a worldwide analysis issue of the Peritoneal Surface Oncology Group International (PSOGI). Int J Hyperthermia. 2017 Aug;33(5):520-527. doi: 10.1080/02656736.2017.1301576. PubMed PMID: 28540827.
Kramer PR, Stinson C, Umorin M, Deng M, Rao M, Bellinger LL, Yee MB, Kinchington PR. Lateral thalamic control of nociceptive response after whisker pad injection of varicella zoster virus. Neuroscience. 2017 Jul 25;356207-216. doi: 10.1016/j.neuroscience.2017.05.030. PubMed PMID: 28549561; PMCID: PMC5516953.
Sanyal A, Mailliard RB, Rinaldo CR, Ratner D, Ding M, Chen Y, Zerbato JM, Giacobbi NS, Venkatachari NJ, Patterson BK, Chargin A, Sluis-Cremer N, Gupta P. Novel assay reveals a large, inducible, replication-competent HIV-1 reservoir in resting CD4+ T cells. Nat Med. 2017 Jul;23(7):885-889. doi: 10.1038/nm.4347. PubMed PMID: 28553933; PMCID: PMC5505781.
Guo ZS, Liu Z, Kowalsky S, Feist M, Kalinski P, Lu B, Storkus WJ, Bartlett DL. Oncolytic Immunotherapy: Conceptual Evolution, Current Strategies, and Future Perspectives. Front Immunol. 2017;8555. doi: 10.3389/fimmu.2017.00555. PubMed PMID: 28555136; PMCID: PMC5430078.
Hanna MG, Monaco SE, Cuda J, Xing J, Ahmed I, Pantanowitz L. Comparison of glass slides and various digital-slide modalities for cytopathology screening and interpretation. Cancer Cytopathol. 2017 Sep;125(9):701-709. doi: 10.1002/cncy.21880. PubMed PMID: 28558124.
Abels E, Pantanowitz L. Current State of the Regulatory Trajectory for Whole Slide Imaging Devices in the USA. J Pathol Inform. 2017;823. doi: 10.4103/jpi.jpi_11_17. PubMed PMID: 28584684; PMCID: PMC5450449.
Sturgis CD, Monaco SE, Sakr H, Pantanowitz L. Cytologic perspectives on neoteric B-cell lymphoproliferative disorders. Diagn Cytopathol. 2017 Nov;45(11):1005-1019. doi: 10.1002/dc.23766. PubMed PMID: 28594112.
Riquelme P, Amodio G, Macedo C, Moreau A, Obermajer N, Brochhausen C, Ahrens N, Kekarainen T, Fändrich F, Cuturi C, Gregori S, Metes D, Schlitt HJ, Thomson AW, Geissler EK, Hutchinson JA. DHRS9 Is a Stable Marker of Human Regulatory Macrophages. Transplantation. 2017 Nov;101(11):2731-2738. doi: 10.1097/TP.0000000000001814. PubMed PMID: 28594751; PMCID: PMC6319563.
Bauermeister J, Giguere R, Leu CS, Febo I, Cranston R, Mayer K, Carballo-Diéguez A. Interactive Voice Response System: Data Considerations and Lessons Learned During a Rectal Microbicide Placebo Adherence Trial for Young Men Who Have Sex With Men. J Med Internet Res. 2017 Jun 9;19(6):e207. doi: 10.2196/jmir.7682. PubMed PMID: 28600275; PMCID: PMC5482925.
Hanna MG, Pantanowitz L. The role of informatics in patient-centered care and personalized medicine. Cancer Cytopathol. 2017 Jun;125(S6):494-501. doi: 10.1002/cncy.21833. PubMed PMID: 28609000.
Fox HL, Dembowski JA, DeLuca NA. A Herpesviral Immediate Early Protein Promotes Transcription Elongation of Viral Transcripts. mBio. 2017 Jun 13;8(3): doi: 10.1128/mBio.00745-17. PubMed PMID: 28611249; PMCID: PMC5472187.
Magge D, Ramalingam L, Shuai Y, Edwards RP, Pingpank JF, Ahrendt SS, Holtzman MP, Zeh HJ, Bartlett DL, Choudry HA. Hyperthermic intraperitoneal chemoperfusion as a component of multimodality therapy for ovarian and primary peritoneal cancer. J Surg Oncol. 2017 Sep;116(3):320-328. doi: 10.1002/jso.24666. PubMed PMID: 28628712; PMCID: PMC5533644.
Bramley JC, Drummond CG, Lennemann NJ, Good CA, Kim KS, Coyne CB. A Three-Dimensional Cell Culture System To Model RNA Virus Infections at the Blood-Brain Barrier. mSphere. 2017 May-Jun;2(3): doi: 10.1128/mSphere.00206-17. PubMed PMID: 28656176; PMCID: PMC5480033.
Hanna MG, Pantanowitz L. Reply to Why is digital pathology in cytopathology lagging behind surgical pathology? Cancer Cytopathol. 2017 Sep;125(9):732. doi: 10.1002/cncy.21890. PubMed PMID: 28657675.
Rappocciolo G, Jenkins F, Rinaldo CR. Comment on primary lymphocyte infection models for KSHV and its putative tumorigenesis mechanisms in B cell lymphomas (Journal of Microbiology 2017, 55(5): 319-329). J Microbiol. 2017 Jul;55(7):592-593. doi: 10.1007/s12275-017-0670-4. PubMed PMID: 28664522.
Swan ZD, Bouwer AL, Wonderlich ER, Barratt-Boyes SM. Persistent accumulation of gut macrophages with impaired phagocytic function correlates with SIV disease progression in macaques. Eur J Immunol. 2017 Nov;47(11):1925-1935. doi: 10.1002/eji.201646904. PubMed PMID: 28667761; PMCID: PMC5751436.
Miyagawa Y, Verlengia G, Reinhart B, Han F, Uchida H, Zucchini S, Goins WF, Simonato M, Cohen JB, Glorioso JC. Deletion of the Virion Host Shut-off Gene Enhances Neuronal-Selective Transgene Expression from an HSV Vector Lacking Functional IE Genes. Mol Ther Methods Clin Dev. 2017 Sep 15;679-90. doi: 10.1016/j.omtm.2017.06.001. PubMed PMID: 28702475; PMCID: PMC5493822.
Xing J, Seigh L, Monaco SE, Ohori NP, Yousem SA, Amin R, Pantanowitz L. Critical diagnoses in cytopathology: Experience at a large medical center. Cancer Cytopathol. 2017 Sep;125(9):726-730. doi: 10.1002/cncy.21896. PubMed PMID: 28704594.
Henricks WH, Karcher DS, Harrison JH Jr, Sinard JH, Riben MW, Boyer PJ, Plath S, Thompson A, Pantanowitz L. Pathology Informatics Essentials for Residents: A Flexible Informatics Curriculum Linked to Accreditation Council for Graduate Medical Education Milestones (a secondary publication). Acad Pathol. 2016 Jan-Dec;32374289516659051. doi: 10.1177/2374289516659051. PubMed PMID: 28725772; PMCID: PMC5497905.
Agudelo-Hernandez A, Chen Y, Bullotta A, Buchanan WG, Klamar-Blain CR, Borowski L, Riddler SA, Rinaldo CR, Macatangay BJC. Subclinical herpesvirus shedding among HIV-1-infected men on antiretroviral therapy. AIDS. 2017 Sep 24;31(15):2085-2094. doi: 10.1097/QAD.0000000000001602. PubMed PMID: 28723708; PMCID: PMC5626452.
Weir MC, Hellwig S, Tan L, Liu Y, Gray NS, Smithgall TE. Dual inhibition of Fes and Flt3 tyrosine kinases potently inhibits Flt3-ITD+ AML cell growth. PLoS One. 2017;12(7):e0181178. doi: 10.1371/journal.pone.0181178. PubMed PMID: 28727840; PMCID: PMC5519068.
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Carballo-Diéguez A, Balán IC, Brown W 3rd, Giguere R, Dolezal C, Leu CS, Marzinke MA, Hendrix CW, Piper JM, Richardson BA, Grossman C, Johnson S, Gomez K, Horn S, Kunjara Na Ayudhya RP, Patterson K, Jacobson C, Bekker LG, Chariyalertsak S, Chitwarakorn A, Gonzales P, Holtz TH, Liu A, Mayer KH, Zorrilla C, Lama J, McGowan I, Cranston RD. High levels of adherence to a rectal microbicide gel and to oral Pre-Exposure Prophylaxis (PrEP) achieved in MTN-017 among men who have sex with men (MSM) and transgender women. PLoS One. 2017;12(7):e0181607. doi: 10.1371/journal.pone.0181607. PubMed PMID: 28750059; PMCID: PMC5531503.
Lee JJ, Jedrych J, Pantanowitz L, Ho J. Validation of Digital Pathology for Primary Histopathological Diagnosis of Routine, Inflammatory Dermatopathology Cases. Am J Dermatopathol. 2018 Jan;40(1):17-23. doi: 10.1097/DAD.0000000000000888. PubMed PMID: 28763335.
Vicetti Miguel RD, Quispe Calla NE, Dixon D, Foster RA, Gambotto A, Pavelko SD, Hall-Stoodley L, Cherpes TL. IL-4-secreting eosinophils promote endometrial stromal cell proliferation and prevent Chlamydia-induced upper genital tract damage. Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):E6892-E6901. doi: 10.1073/pnas.1621253114. PubMed PMID: 28765368; PMCID: PMC5565408.
Rappocciolo G, Jais M, Piazza PA, DeLucia DC, Jenkins FJ, Rinaldo CR. Human Herpesvirus 8 Infects and Replicates in Langerhans Cells and Interstitial Dermal Dendritic Cells and Impairs Their Function. J Virol. 2017 Oct 15;91(20): doi: 10.1128/JVI.00909-17. PubMed PMID: 28768873; PMCID: PMC5625489.
Corry J, Arora N, Good CA, Sadovsky Y, Coyne CB. Organotypic models of type III interferon-mediated protection from Zika virus infections at the maternal-fetal interface. Proc Natl Acad Sci U S A. 2017 Aug 29;114(35):9433-9438. doi: 10.1073/pnas.1707513114. PubMed PMID: 28784796; PMCID: PMC5584447.
Advani G, Lim YC, Catimel B, Lio DSS, Ng NLY, Chüeh AC, Tran M, Anasir MI, Verkade H, Zhu HJ, Turk BE, Smithgall TE, Ang CS, Griffin M, Cheng HC. Csk-homologous kinase (Chk) is an efficient inhibitor of Src-family kinases but a poor catalyst of phosphorylation of their C-terminal regulatory tyrosine. Cell Commun Signal. 2017 Aug 7;15(1):29. doi: 10.1186/s12964-017-0186-x. PubMed PMID: 28784162; PMCID: PMC5547543.
Goswami R, Shair KHY, Gershburg E. Molecular diversity of IgG responses to Epstein-Barr virus proteins in asymptomatic Epstein-Barr virus carriers. J Gen Virol. 2017 Sep;98(9):2343-2350. doi: 10.1099/jgv.0.000891. PubMed PMID: 28795661.
Martínez-Girón R, Pantanowitz L. Cerebrospinal fluid cytology in nonmalignant aseptic meningeal disorders. Diagn Cytopathol. 2017 Nov;45(11):1020-1029. doi: 10.1002/dc.23797. PubMed PMID: 28816034.
Giguere R, Rael CT, Sheinfil A, Balán IC, Brown W 3rd, Ho T, Dolezal C, Leu CS, Liu A, Mayer KH, Lama JR, McGowan I, Carballo-Diéguez A, Cranston RD, MTN-017 Protocol Team.. Factors Supporting and Hindering Adherence to Rectal Microbicide Gel Use with Receptive Anal Intercourse in a Phase 2 Trial. AIDS Behav. 2018 Feb;22(2):388-401. doi: 10.1007/s10461-017-1890-7. PubMed PMID: 28825142; PMCID: PMC5818328.
Mea VD, Carbone A, Di Loreto C, Bueno G, De Paoli P, García-Rojo M, de Mena D, Gloghini A, Ilyas M, Laurinavicius A, Rasmusson A, Milione M, Dolcetti R, Pagani M, Stoppini A, Sulfaro S, Bartolo M, Mazzon E, Soyer HP, Pantanowitz L. Teaching Digital Pathology: The International School of Digital Pathology and Proposed Syllabus. J Pathol Inform. 2017;827. doi: 10.4103/jpi.jpi_17_17. PubMed PMID: 28828198; PMCID: PMC5545774.
Griffith CC, Schmitt AC, Pantanowitz L, Monaco SE. A pattern-based risk-stratification scheme for salivary gland cytology: A multi-institutional, interobserver variability study to determine applicability. Cancer Cytopathol. 2017 Oct;125(10):776-785. doi: 10.1002/cncy.21906. PubMed PMID: 28834233; PMCID: PMC5647230.
Guo ZS, Bartlett DL. Editorial of the Special Issue: Oncolytic Viruses as a Novel Form of Immunotherapy for Cancer. Biomedicines. 2017 Aug 24;5(3): doi: 10.3390/biomedicines5030052. PubMed PMID: 28837095; PMCID: PMC5618310.
Kwun HJ, Wendzicki JA, Shuda Y, Moore PS, Chang Y. Merkel cell polyomavirus small T antigen induces genome instability by E3 ubiquitin ligase targeting. Oncogene. 2017 Dec 7;36(49):6784-6792. doi: 10.1038/onc.2017.277. PubMed PMID: 28846109; PMCID: PMC5720911.
Wu S, Zhu W, Peng Y, Wang L, Hong Y, Huang L, Dong D, Xie J, Merchen T, Kruse E, Guo ZS, Bartlett D, Fu N, He Y. The Antitumor Effects of Vaccine-Activated CD8+ T Cells Associate with Weak TCR Signaling and Induction of Stem-Like Memory T Cells. Cancer Immunol Res. 2017 Oct;5(10):908-919. doi: 10.1158/2326-6066.CIR-17-0016. PubMed PMID: 28851693; PMCID: PMC5626646.
Yates CC, Rodrigues M, Nuschke A, Johnson ZI, Whaley D, Stolz D, Newsome J, Wells A. Multipotent stromal cells/mesenchymal stem cells and fibroblasts combine to minimize skin hypertrophic scarring. Stem Cell Res Ther. 2017 Sep 5;8(1):193. doi: 10.1186/s13287-017-0644-9. PubMed PMID: 28874184; PMCID: PMC5585998.
Okada H, Thorne SH. Is the immune response a friend or foe for viral therapy of glioma? Neuro Oncol. 2017 Jul 1;19(7):882-883. doi: 10.1093/neuonc/nox082. PubMed PMID: 28874006; PMCID: PMC5737571.
Mujib S, Saiyed A, Fadel S, Bozorgzad A, Aidarus N, Yue FY, Benko E, Kovacs C, Emert-Sedlak LA, Smithgall TE, Ostrowski MA. Pharmacologic HIV-1 Nef blockade promotes CD8 T cell-mediated elimination of latently HIV-1-infected cells in vitro. JCI Insight. 2017 Sep 7;2(17): doi: 10.1172/jci.insight.93684. PubMed PMID: 28878119; PMCID: PMC5621880.
Dhir M, Li W, Hogg ME, Bartlett DL, Carty SE, McCoy KL, Challinor SM, Yip L. Clinical Predictors of Malignancy in Patients with Pheochromocytoma and Paraganglioma. Ann Surg Oncol. 2017 Nov;24(12):3624-3630. doi: 10.1245/s10434-017-6074-1. PubMed PMID: 28884434.
Rogers MB, Gulino KM, Tesh RB, Cui L, Fitch A, Unnasch TR, Popov VL, Travassos da Rosa APA, Guzman H, Carrera JP, Vasilakis N, Ghedin E. Characterization of five unclassified orthobunyaviruses (Bunyaviridae) from Africa and the Americas. J Gen Virol. 2017 Sep;98(9):2258-2266. doi: 10.1099/jgv.0.000899. PubMed PMID: 28885138; PMCID: PMC5817192.
Dembowski JA, Deluca NA. Purification of Viral DNA for the Identification of Associated Viral and Cellular Proteins. J Vis Exp. 2017 Aug 31;(126): doi: 10.3791/56374. PubMed PMID: 28892026; PMCID: PMC5614390.
Chang Y, Moore PS, Weiss RA. Human oncogenic viruses: nature and discovery. Philos Trans R Soc Lond B Biol Sci. 2017 Oct 19;372(1732): doi: 10.1098/rstb.2016.0264. PubMed PMID: 28893931; PMCID: PMC5597731.
Sharaf NG, Xi Z, Ishima R, Gronenborn AM. The HIV-1 p66 homodimeric RT exhibits different conformations in the binding-competent and -incompetent NNRTI site. Proteins. 2017 Dec;85(12):2191-2197. doi: 10.1002/prot.25383. PubMed PMID: 28905420; PMCID: PMC5751703.
Jagger BW, Miner JJ, Cao B, Arora N, Smith AM, Kovacs A, Mysorekar IU, Coyne CB, Diamond MS. Gestational Stage and IFN-λ Signaling Regulate ZIKV Infection In Utero. Cell Host Microbe. 2017 Sep 13;22(3):366-376.e3. doi: 10.1016/j.chom.2017.08.012. PubMed PMID: 28910635; PMCID: PMC5647680.
Lee N, Le Sage V, Nanni AV, Snyder DJ, Cooper VS, Lakdawala SS. Genome-wide analysis of influenza viral RNA and nucleoprotein association. Nucleic Acids Res. 2017 Sep 6;45(15):8968-8977. doi: 10.1093/nar/gkx584. PubMed PMID: 28911100; PMCID: PMC5587783.
Gupta P, Sanyal A, Mailliard RB. TZA: a novel assay for measuring the latent HIV-1 reservoir. Expert Rev Mol Diagn. 2017 Dec;17(12):1033-1035. doi: 10.1080/14737159.2017.1384315. PubMed PMID: 28937839; PMCID: PMC5821502.
Shimizu N, Doyal MF, Goins WF, Kadekawa K, Wada N, Kanai AJ, de Groat WC, Hirayama A, Uemura H, Glorioso JC, Yoshimura N. Morphological changes in different populations of bladder afferent neurons detected by herpes simplex virus (HSV) vectors with cell-type-specific promoters in mice with spinal cord injury. Neuroscience. 2017 Nov 19;364190-201. doi: 10.1016/j.neuroscience.2017.09.024. PubMed PMID: 28942324; PMCID: PMC5768486.
Radomski M, Zenati M, Novak S, Tam V, Steve J, Bartlett DL, Zureikat AH, Zeh HJ 3rd, Hogg ME. Factors associated with prolonged hospitalization in patients undergoing pancreatoduodenectomy. Am J Surg. 2018 Apr;215(4):636-642. doi: 10.1016/j.amjsurg.2017.06.040. PubMed PMID: 28958654.
Pantanowitz L, Liu C, Huang Y, Guo H, Rohde GK. Impact of Altering Various Image Parameters on Human Epidermal Growth Factor Receptor 2 Image Analysis Data Quality. J Pathol Inform. 2017;839. doi: 10.4103/jpi.jpi_46_17. PubMed PMID: 28966838; PMCID: PMC5609390.
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Kramer PR, Strand J, Stinson C, Bellinger LL, Kinchington PR, Yee MB, Umorin M, Peng YB. Role for the Ventral Posterior Medial/Posterior Lateral Thalamus and Anterior Cingulate Cortex in Affective/Motivation Pain Induced by Varicella Zoster Virus. Front Integr Neurosci. 2017;1127. doi: 10.3389/fnint.2017.00027. PubMed PMID: 29089872; PMCID: PMC5651084.
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Duangkhae P, Erdos G, Ryman KD, Watkins SC, Falo LD Jr, Marques ETA Jr, Barratt-Boyes SM. Interplay between Keratinocytes and Myeloid Cells Drives Dengue Virus Spread in Human Skin. J Invest Dermatol. 2018 Mar;138(3):618-626. doi: 10.1016/j.jid.2017.10.018. PubMed PMID: 29106931.
Cantalupo PG, Katz JP, Pipas JM. Viral sequences in human cancer. Virology. 2018 Jan 1;513208-216. doi: 10.1016/j.virol.2017.10.017. PubMed PMID: 29107929; PMCID: PMC5828528.
Choudry HA, Pai RK, Shuai Y, Ramalingam L, Jones HL, Pingpank JF, Ahrendt SS, Holtzman MP, Zureikat AH, Zeh HJ, Bartlett DL. Impact of Cellularity on Oncologic Outcomes Following Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemoperfusion for Pseudomyxoma Peritonei. Ann Surg Oncol. 2018 Jan;25(1):76-82. doi: 10.1245/s10434-017-6214-7. PubMed PMID: 29110275.
Cranston RD, Regueiro M, Hashash J, Baker JR, Richardson-Harman N, Janocko L, McGowan I. A Pilot Study of the Prevalence of Anal Human Papillomavirus and Dysplasia in a Cohort of Patients With IBD. Dis Colon Rectum. 2017 Dec;60(12):1307-1313. doi: 10.1097/DCR.0000000000000878. PubMed PMID: 29112567.
Wonderlich ER, Caroline AL, McMillen CM, Walters AW, Reed DS, Barratt-Boyes SM, Hartman AL. Peripheral Blood Biomarkers of Disease Outcome in a Monkey Model of Rift Valley Fever Encephalitis. J Virol. 2018 Feb 1;92(3): doi: 10.1128/JVI.01662-17. PubMed PMID: 29118127; PMCID: PMC5774883.
Carballo-Diéguez A, Giguere R, Dolezal C, Leu CS, Balán IC, Brown W 3rd, Rael C, Richardson BA, Piper JM, Bekker LG, Chariyalertsak S, Chitwarakorn A, Gonzales P, Holtz TH, Liu A, Mayer KH, Zorrilla CD, Lama JR, McGowan I, Cranston RD, MTN-017 Protocol Team.. Preference of Oral Tenofovir Disoproxil Fumarate/Emtricitabine Versus Rectal Tenofovir Reduced-Glycerin 1% Gel Regimens for HIV Prevention Among Cisgender Men and Transgender Women Who Engage in Receptive Anal Intercourse with Men. AIDS Behav. 2017 Dec;21(12):3336-3345. doi: 10.1007/s10461-017-1969-1. PubMed PMID: 29119473; PMCID: PMC5856109.
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Dhir M, Zenati MS, Jones HL, Bartlett DL, Choudry MHA, Pingpank JF, Holtzman MP, Bahary N, Hogg ME, Zeh HJ 3rd, Geller DA, Wallis Marsh J, Tsung A, Zureikat AH. Effectiveness of Hepatic Artery Infusion (HAI) Versus Selective Internal Radiation Therapy (Y90) for Pretreated Isolated Unresectable Colorectal Liver Metastases (IU-CRCLM). Ann Surg Oncol. 2018 Feb;25(2):550-557. doi: 10.1245/s10434-017-6265-9. PubMed PMID: 29181682.
Diamond MS, Coyne CB. Vaccines in 2017: Closing in on a Zika virus vaccine. Nat Rev Immunol. 2018 Feb;18(2):89-90. doi: 10.1038/nri.2017.132. PubMed PMID: 29199280.
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Zahorchak AF, Macedo C, Hamm DE, Butterfield LH, Metes DM, Thomson AW. High PD-L1/CD86 MFI ratio and IL-10 secretion characterize human regulatory dendritic cells generated for clinical testing in organ transplantation. Cell Immunol. 2018 Jan;3239-18. doi: 10.1016/j.cellimm.2017.08.008. PubMed PMID: 29217299; PMCID: PMC5835175.
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Mercier F, Passot G, Villeneuve L, Levine EA, Yonemura Y, Goéré D, Sugarbaker PH, Marolho C, Bartlett DL, Glehen O, BIG-RENAPE Working Group.. Peritoneal Carcinomatosis of Urachus Origin Treated by Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemotherapy (HIPEC): An International Registry of 36 Patients. Ann Surg Oncol. 2018 Apr;25(4):1094-1100. doi: 10.1245/s10434-017-6299-z. PubMed PMID: 29238881.
Song X, Zhu S, Xie Y, Liu J, Sun L, Zeng D, Wang P, Ma X, Kroemer G, Bartlett DL, Billiar TR, Lotze MT, Zeh HJ, Kang R, Tang D. JTC801 Induces pH-dependent Death Specifically in Cancer Cells and Slows Growth of Tumors in Mice. Gastroenterology. 2018 Apr;154(5):1480-1493. doi: 10.1053/j.gastro.2017.12.004. PubMed PMID: 29248440; PMCID: PMC5880694.
Moroco JA, Alvarado JJ, Staudt RP, Shi H, Wales TE, Smithgall TE, Engen JR. Remodeling of HIV-1 Nef Structure by Src-Family Kinase Binding. J Mol Biol. 2018 Feb 2;430(3):310-321. doi: 10.1016/j.jmb.2017.12.008. PubMed PMID: 29258818; PMCID: PMC5801098.
Koday MT, Leonard JA, Munson P, Forero A, Koday M, Bratt DL, Fuller JT, Murnane R, Qin S, Reinhart TA, Duus K, Messaoudi I, Hartman AL, Stefano-Cole K, Morrison J, Katze MG, Fuller DH. Multigenic DNA vaccine induces protective cross-reactive T cell responses against heterologous influenza virus in nonhuman primates. PLoS One. 2017;12(12):e0189780. doi: 10.1371/journal.pone.0189780. PubMed PMID: 29267331; PMCID: PMC5739435.
Mandell JB, Deslouches B, Montelaro RC, Shanks RMQ, Doi Y, Urish KL. Elimination of Antibiotic Resistant Surgical Implant Biofilms Using an Engineered Cationic Amphipathic Peptide WLBU2. Sci Rep. 2017 Dec 22;7(1):18098. doi: 10.1038/s41598-017-17780-6. PubMed PMID: 29273750; PMCID: PMC5741726.
Berkey SE, Thorne SH, Bartlett DL. Oncolytic Virotherapy and the Tumor Microenvironment. Adv Exp Med Biol. 2017;1036157-172. doi: 10.1007/978-3-319-67577-0_11. PubMed PMID: 29275471.
Bayer A, Lennemann NJ, Ouyang Y, Sadovsky E, Sheridan MA, Roberts RM, Coyne CB, Sadovsky Y. Chromosome 19 microRNAs exert antiviral activity independent from type III interferon signaling. Placenta. 2018 Jan;6133-38. doi: 10.1016/j.placenta.2017.11.004. PubMed PMID: 29277269; PMCID: PMC5745809.
Votanopoulos KI, Bartlett D, Moran B, Haroon CM, Russell G, Pingpank JF, Ramalingam L, Kandiah C, Chouliaras K, Shen P, Levine EA. PCI is Not Predictive of Survival After Complete CRS/HIPEC in Peritoneal Dissemination from High-Grade Appendiceal Primaries. Ann Surg Oncol. 2018 Mar;25(3):674-678. doi: 10.1245/s10434-017-6315-3. PubMed PMID: 29288288; PMCID: PMC5890297.
Brothers KM, Kowalski RP, Tian S, Kinchington PR, Shanks RMQ. Bacteria induce autophagy in a human ocular surface cell line. Exp Eye Res. 2018 Mar;16812-18. doi: 10.1016/j.exer.2017.12.010. PubMed PMID: 29288646; PMCID: PMC5826873.
Xing J, Monaco SE, Pantanowitz L. Utility of The Paris System for Reporting Urinary Cytology in upper urinary tract specimens. J Am Soc Cytopathol. 2018 Nov - Dec;7(6):311-317. doi: 10.1016/j.jasc.2018.07.006. PubMed PMID: 31043301.
Dilly AK, Honick BD, Lee YJ, Guo ZS, Zeh HJ, Bartlett DL, Choudry HA. Targeting G-protein coupled receptor-related signaling pathway in a murine xenograft model of appendiceal pseudomyxoma peritonei. Oncotarget. 2017 Dec 5;8(63):106888-106900. doi: 10.18632/oncotarget.22455. PubMed PMID: 29290997; PMCID: PMC5739782.
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Ander SE, Rudzki EN, Arora N, Sadovsky Y, Coyne CB, Boyle JP. Human Placental Syncytiotrophoblasts Restrict Toxoplasma gondii Attachment and Replication and Respond to Infection by Producing Immunomodulatory Chemokines. mBio. 2018 Jan 9;9(1): doi: 10.1128/mBio.01678-17. PubMed PMID: 29317509; PMCID: PMC5760739.
Levine EA, Votanopoulos KI, Shen P, Russell G, Fenstermaker J, Mansfield P, Bartlett D, Stewart JH. A Multicenter Randomized Trial to Evaluate Hematologic Toxicities after Hyperthermic Intraperitoneal Chemotherapy with Oxaliplatin or Mitomycin in Patients with Appendiceal Tumors. J Am Coll Surg. 2018 Apr;226(4):434-443. doi: 10.1016/j.jamcollsurg.2017.12.027. PubMed PMID: 29331663; PMCID: PMC5890298.
Tipton L, Müller CL, Kurtz ZD, Huang L, Kleerup E, Morris A, Bonneau R, Ghedin E. Fungi stabilize connectivity in the lung and skin microbial ecosystems. Microbiome. 2018 Jan 15;6(1):12. doi: 10.1186/s40168-017-0393-0. PubMed PMID: 29335027; PMCID: PMC5769346.
Obermajer N, Urban J, Wieckowski E, Muthuswamy R, Ravindranathan R, Bartlett DL, Kalinski P. Promoting the accumulation of tumor-specific T cells in tumor tissues by dendritic cell vaccines and chemokine-modulating agents. Nat Protoc. 2018 Feb;13(2):335-357. doi: 10.1038/nprot.2017.130. PubMed PMID: 29345636.
Chimelli L, Moura Pone S, Avvad-Portari E, Farias Meira Vasconcelos Z, Araújo Zin A, Prado Cunha D, Raposo Thompson N, Lopes Moreira ME, Wiley CA, da Silva Pone MV. Persistence of Zika Virus After Birth: Clinical, Virological, Neuroimaging, and Neuropathological Documentation in a 5-Month Infant With Congenital Zika Syndrome. J Neuropathol Exp Neurol. 2018 Mar 1;77(3):193-198. doi: 10.1093/jnen/nlx116. PubMed PMID: 29346650.
Johnson ME, Cantalupo PG, Pipas JM. Identification of Head and Neck Cancer Subtypes Based on Human Papillomavirus Presence and E2F-Regulated Gene Expression. mSphere. 2018 Jan-Feb;3(1): doi: 10.1128/mSphere.00580-17. PubMed PMID: 29359188; PMCID: PMC5760753.
Cranston RD, Baker JR, Siegel A, Brand RM, Janocko L, McGowan I. A Pilot Study of the Immunologic, Virologic, and Pathologic Consequences of Intra-anal 5% Imiquimod in HIV-1-Infected Men With High-Grade Squamous Intraepithelial Lesions. Dis Colon Rectum. 2018 Mar;61(3):298-305. doi: 10.1097/DCR.0000000000000991. PubMed PMID: 29360679.
Wu AG, Pruijssers AJ, Brown JJ, Stencel-Baerenwald JE, Sutherland DM, Iskarpatyoti JA, Dermody TS. Age-dependent susceptibility to reovirus encephalitis in mice is influenced by maturation of the type-I interferon response. Pediatr Res. 2018 May;83(5):1057-1066. doi: 10.1038/pr.2018.13. PubMed PMID: 29364865; PMCID: PMC5959747.
Hong SH, Lee DH, Lee YS, Jo MJ, Jeong YA, Kwon WT, Choudry HA, Bartlett DL, Lee YJ. Molecular crosstalk between ferroptosis and apoptosis: emerging role of ER stress-induced p53-independent PUMA expression. Oncotarget. 2017 Dec 29;8(70):115164-115178. doi: 10.18632/oncotarget.23046. PubMed PMID: 29383150; PMCID: PMC5777762.
Hanna MG, Ahmed I, Nine J, Prajapati S, Pantanowitz L. Augmented Reality Technology Using Microsoft HoloLens in Anatomic Pathology. Arch Pathol Lab Med. 2018 May;142(5):638-644. doi: 10.5858/arpa.2017-0189-OA. PubMed PMID: 29384690.
Platt DJ, Smith AM, Arora N, Diamond MS, Coyne CB, Miner JJ. Zika virus-related neurotropic flaviviruses infect human placental explants and cause fetal demise in mice. Sci Transl Med. 2018 Jan 31;10(426): doi: 10.1126/scitranslmed.aao7090. PubMed PMID: 29386359; PMCID: PMC6136894.
Jorgensen DR, Shaaban CE, Wiley CA, Gianaros PJ, Mettenburg J, Rosano C. A population neuroscience approach to the study of cerebral small vessel disease in midlife and late life: an invited review. Am J Physiol Heart Circ Physiol. 2018 Jun 1;314(6):H1117-H1136. doi: 10.1152/ajpheart.00535.2017. PubMed PMID: 29393657; PMCID: PMC6032084.
Bissel SJ, Gurnsey K, Jedema HP, Smith NF, Wang G, Bradberry CW, Wiley CA. Aged Chinese-origin rhesus macaques infected with SIV develop marked viremia in absence of clinical disease, inflammation or cognitive impairment. Retrovirology. 2018 Feb 1;15(1):17. doi: 10.1186/s12977-018-0400-y. PubMed PMID: 29391069; PMCID: PMC5796498.
Moon EK, Wang LS, Bekdache K, Lynn RC, Lo A, Thorne SH, Albelda SM. Intra-tumoral delivery of CXCL11 via a vaccinia virus, but not by modified T cells, enhances the efficacy of adoptive T cell therapy and vaccines. Oncoimmunology. 2018;7(3):e1395997. doi: 10.1080/2162402X.2017.1395997. PubMed PMID: 29399394; PMCID: PMC5790399.
Wu M, Alvarado JJ, Augelli-Szafran CE, Ptak RG, Smithgall TE. A single β-octyl glucoside molecule induces HIV-1 Nef dimer formation in the absence of partner protein binding. PLoS One. 2018;13(2):e0192512. doi: 10.1371/journal.pone.0192512. PubMed PMID: 29415006; PMCID: PMC5802939.
Fraggetta F, Garozzo S, Zannoni GF, Pantanowitz L, Rossi ED. Routine Digital Pathology Workflow: The Catania Experience. J Pathol Inform. 2017;851. doi: 10.4103/jpi.jpi_58_17. PubMed PMID: 29416914; PMCID: PMC5760840.
Pantanowitz L, Preffer F, Wilbur DC. Advanced imaging technology applications in cytology. Diagn Cytopathol. 2019 Jan;47(1):5-14. doi: 10.1002/dc.23898. PubMed PMID: 29436153.
Delorme-Axford E, Abernathy E, Lennemann NJ, Bernard A, Ariosa A, Coyne CB, Kirkegaard K, Klionsky DJ. The exoribonuclease Xrn1 is a post-transcriptional negative regulator of autophagy. Autophagy. 2018;14(5):898-912. doi: 10.1080/15548627.2018.1441648. PubMed PMID: 29465287; PMCID: PMC6070002.
Chaudhary SC, Khalid S, Smethurst V, Monier D, Mobley J, Huet A, Conway JF, Napierala D. Proteomic profiling of extracellular vesicles released from vascular smooth muscle cells during initiation of phosphate-induced mineralization. Connect Tissue Res. 2018 Dec;59(sup1):55-61. doi: 10.1080/03008207.2018.1444759. PubMed PMID: 29471680; PMCID: PMC6414064.
Debiec KT, Whitley MJ, Koharudin LMI, Chong LT, Gronenborn AM. Integrating NMR, SAXS, and Atomistic Simulations: Structure and Dynamics of a Two-Domain Protein. Biophys J. 2018 Feb 27;114(4):839-855. doi: 10.1016/j.bpj.2018.01.001. PubMed PMID: 29490245; PMCID: PMC5985006.
Kraus J, Gupta R, Yehl J, Lu M, Case DA, Gronenborn AM, Akke M, Polenova T. Chemical Shifts of the Carbohydrate Binding Domain of Galectin-3 from Magic Angle Spinning NMR and Hybrid Quantum Mechanics/Molecular Mechanics Calculations. J Phys Chem B. 2018 Mar 22;122(11):2931-2939. doi: 10.1021/acs.jpcb.8b00853. PubMed PMID: 29498857; PMCID: PMC5892201.
Brown W 3rd, Giguere R, Sheinfil A, Ibitoye M, Balan I, Ho T, Brown B, Quispe L, Sukwicha W, Lama JR, Carballo-Diéguez A, Cranston RD. Challenges and solutions implementing an SMS text message-based survey CASI and adherence reminders in an international biomedical HIV PrEP study (MTN 017). J Biomed Inform. 2018 Apr;8078-86. doi: 10.1016/j.jbi.2018.02.018. PubMed PMID: 29501908; PMCID: PMC5920551.
Brown JJ, Short SP, Stencel-Baerenwald J, Urbanek K, Pruijssers AJ, McAllister N, Ikizler M, Taylor G, Aravamudhan P, Khomandiak S, Jabri B, Williams CS, Dermody TS. Reovirus-Induced Apoptosis in the Intestine Limits Establishment of Enteric Infection. J Virol. 2018 May 15;92(10): doi: 10.1128/JVI.02062-17. PubMed PMID: 29514905; PMCID: PMC5923068.
Shi J, Xiong R, Zhou T, Su P, Zhang X, Qiu X, Li H, Li S, Yu C, Wang B, Ding C, Smithgall TE, Zheng YH. HIV-1 Nef Antagonizes SERINC5 Restriction by Downregulation of SERINC5 via the Endosome/Lysosome System. J Virol. 2018 Jun 1;92(11): doi: 10.1128/JVI.00196-18. PubMed PMID: 29514909; PMCID: PMC5952139.
Pantanowitz L, Thompson LDR, Rossi ED. Diagnostic Approach to Fine Needle Aspirations of Cystic Lesions of the Salivary Gland. Head Neck Pathol. 2018 Dec;12(4):548-561. doi: 10.1007/s12105-018-0904-8. PubMed PMID: 29524082; PMCID: PMC6232202.
Gandhi M, Gandhi RT, Stefanescu A, Bosch RJ, Cyktor JC, Horng H, Louie A, Phung N, Eron JJ, Hogg E, Macatangay BJC, Hensel C, Fletcher CV, Mellors JW, McMahon DK, A5321 Team.. Cumulative Antiretroviral Exposure Measured in Hair Is Not Associated With Measures of HIV Persistence or Inflammation Among Individuals on Suppressive ART. J Infect Dis. 2018 Jun 20;218(2):234-238. doi: 10.1093/infdis/jiy011. PubMed PMID: 29529230; PMCID: PMC6009579.
Knowlton JJ, Fernández de Castro I, Ashbrook AW, Gestaut DR, Zamora PF, Bauer JA, Forrest JC, Frydman J, Risco C, Dermody TS. The TRiC chaperonin controls reovirus replication through outer-capsid folding. Nat Microbiol. 2018 Apr;3(4):481-493. doi: 10.1038/s41564-018-0122-x. PubMed PMID: 29531365; PMCID: PMC5874176.
Ashman D, Pantanowitz L. Kaposi Sarcoma With Coexisting Intravascular Lymphoma. Int J Surg Pathol. 2019 Feb;27(1):62-63. doi: 10.1177/1066896918762053. PubMed PMID: 29532696.
Low CA, Bovbjerg DH, Ahrendt S, Choudry MH, Holtzman M, Jones HL, Pingpank JF Jr, Ramalingam L, Zeh HJ 3rd, Zureikat AH, Bartlett DL. Fitbit step counts during inpatient recovery from cancer surgery as a predictor of readmission. Ann Behav Med. 2018 Jan 5;52(1):88-92. doi: 10.1093/abm/kax022. PubMed PMID: 29538623; PMCID: PMC6051699.
Lanik WE, Mara MA, Mihi B, Coyne CB, Good M. Stem Cell-Derived Models of Viral Infections in the Gastrointestinal Tract. Viruses. 2018 Mar 10;10(3): doi: 10.3390/v10030124. PubMed PMID: 29534451; PMCID: PMC5869517.
Cantalupo PG, Pipas JM. Complete Genome Sequence of Pittsburgh Sewage-Associated Virus 1. Genome Announc. 2018 Mar 15;6(11): doi: 10.1128/genomeA.01460-17. PubMed PMID: 29545305; PMCID: PMC5854781.
Sutherland DM, Aravamudhan P, Dermody TS. An Orchestra of Reovirus Receptors: Still Searching for the Conductor. Adv Virus Res. 2018;100223-246. doi: 10.1016/bs.aivir.2017.10.005. PubMed PMID: 29551138.
Shair KHY, Reddy A, Cooper VS. New Insights from Elucidating the Role of LMP1 in Nasopharyngeal Carcinoma. Cancers (Basel). 2018 Mar 21;10(4): doi: 10.3390/cancers10040086. PubMed PMID: 29561768; PMCID: PMC5923341.
Fraggetta F, Rossi ED, Pantanowitz L. Advocating a Laboratory Information System-Centric Approach to Digital Pathology. Arch Pathol Lab Med. 2018 Apr;142(4):434. doi: 10.5858/arpa.2017-0487-LE. PubMed PMID: 29565205.
Paramasivam S, Gronenborn AM, Polenova T. Backbone amide 15N chemical shift tensors report on hydrogen bonding interactions in proteins: A magic angle spinning NMR study. Solid State Nucl Magn Reson. 2018 Aug;921-6. doi: 10.1016/j.ssnmr.2018.03.002. PubMed PMID: 29579703; PMCID: PMC6261280.
Benson CA, Andersen JW, Macatangay BJC, Mailliard RB, Rinaldo CR Jr, Read S, Bozzolo DR, Purdue L, Jennings C, Keefer MC, Glesby M, Tebas P, Russell AF, Martin J, Annunziato P, Popmihajlov Z, Lennox JL. Safety and Immunogenicity of Zoster Vaccine Live in Human Immunodeficiency Virus-Infected Adults With CD4+ Cell Counts >200 Cells/mL Virologically Suppressed on Antiretroviral Therapy. Clin Infect Dis. 2018 Nov 13;67(11):1712-1719. doi: 10.1093/cid/ciy242. PubMed PMID: 29590326; PMCID: PMC6233680.
Lee YS, Lee DH, Choudry HA, Bartlett DL, Lee YJ. Ferroptosis-Induced Endoplasmic Reticulum Stress: Cross-talk between Ferroptosis and Apoptosis. Mol Cancer Res. 2018 Jul;16(7):1073-1076. doi: 10.1158/1541-7786.MCR-18-0055. PubMed PMID: 29592897; PMCID: PMC6030493.
Clunie D, Hosseinzadeh D, Wintell M, De Mena D, Lajara N, Garcia-Rojo M, Bueno G, Saligrama K, Stearrett A, Toomey D, Abels E, Apeldoorn FV, Langevin S, Nichols S, Schmid J, Horchner U, Beckwith B, Parwani A, Pantanowitz L. Digital Imaging and Communications in Medicine Whole Slide Imaging Connectathon at Digital Pathology Association Pathology Visions 2017. J Pathol Inform. 2018;96. doi: 10.4103/jpi.jpi_1_18. PubMed PMID: 29619278; PMCID: PMC5869966.
Mercier F, Bakrin N, Bartlett DL, Goere D, Quenet F, Dumont F, Heyd B, Abboud K, Marolho C, Villeneuve L, Glehen O, PSOGI Working Group., BIG-RENAPE Working Group.. Peritoneal Carcinomatosis of Rare Ovarian Origin Treated by Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemotherapy: A Multi-Institutional Cohort from PSOGI and BIG-RENAPE. Ann Surg Oncol. 2018 Jun;25(6):1668-1675. doi: 10.1245/s10434-018-6464-z. PubMed PMID: 29637438.
Chen C, Avila J, Arezki H, Nguyen VL, Shen J, Mucha-Kruczyński M, Yao F, Boutchich M, Chen Y, Lee YH, Asensio MC. Large local lattice expansion in graphene adlayers grown on copper. Nat Mater. 2018 May;17(5):450-455. doi: 10.1038/s41563-018-0053-1. PubMed PMID: 29632409.
Niazi MKK, Tavolara TE, Arole V, Hartman DJ, Pantanowitz L, Gurcan MN. Identifying tumor in pancreatic neuroendocrine neoplasms from Ki67 images using transfer learning. PLoS One. 2018;13(4):e0195621. doi: 10.1371/journal.pone.0195621. PubMed PMID: 29649302; PMCID: PMC5896941.
DeLucia DC, Rinaldo CR, Rappocciolo G. Inefficient HIV-1 trans Infection of CD4+ T Cells by Macrophages from HIV-1 Nonprogressors Is Associated with Altered Membrane Cholesterol and DC-SIGN. J Virol. 2018 Jul 1;92(13): doi: 10.1128/JVI.00092-18. PubMed PMID: 29643243; PMCID: PMC6002718.
Wilkin TJ, Chen H, Cespedes MS, Leon-Cruz JT, Godfrey C, Chiao EY, Bastow B, Webster-Cyriaque J, Feng Q, Dragavon J, Coombs RW, Presti RM, Saah A, Cranston RD. A Randomized, Placebo-Controlled Trial of the Quadrivalent Human Papillomavirus Vaccine in Human Immunodeficiency Virus-Infected Adults Aged 27 Years or Older: AIDS Clinical Trials Group Protocol A5298. Clin Infect Dis. 2018 Oct 15;67(9):1339-1346. doi: 10.1093/cid/ciy274. PubMed PMID: 29659751; PMCID: PMC6186857.
Song X, Lee DH, Dilly AK, Lee YS, Choudry HA, Kwon YT, Bartlett DL, Lee YJ. Crosstalk Between Apoptosis and Autophagy Is Regulated by the Arginylated BiP/Beclin-1/p62 Complex. Mol Cancer Res. 2018 Jul;16(7):1077-1091. doi: 10.1158/1541-7786.MCR-17-0685. PubMed PMID: 29669822; PMCID: PMC6030503.
Velásquez C, Amako Y, Harold A, Toptan T, Chang Y, Shuda M. Characterization of a Merkel Cell Polyomavirus-Positive Merkel Cell Carcinoma Cell Line CVG-1. Front Microbiol. 2018;9713. doi: 10.3389/fmicb.2018.00713. PubMed PMID: 29696010; PMCID: PMC5905237.
Dietrich MH, Ogden KM, Long JM, Ebenhoch R, Thor A, Dermody TS, Stehle T. Structural and Functional Features of the Reovirus σ1 Tail. J Virol. 2018 Jul 15;92(14): doi: 10.1128/JVI.00336-18. PubMed PMID: 29695426; PMCID: PMC6026731.
Guha D, Wagner MCE, Ayyavoo V. Human immunodeficiency virus type 1 (HIV-1)-mediated neuroinflammation dysregulates neurogranin and induces synaptodendritic injury. J Neuroinflammation. 2018 Apr 27;15(1):126. doi: 10.1186/s12974-018-1160-2. PubMed PMID: 29703241; PMCID: PMC5923011.
Shimizu N, Doyal MF, Goins WF, Kadekawa K, Wada N, Kanai AJ, de Groat WC, Hirayama A, Uemura H, Glorioso JC, Yoshimura N. Corrigendum to 'Morphological Changes in Different Populations of Bladder Afferent Neurons Detected by Herpes Simplex Virus (HSV) Vectors with Cell-type-specific Promoters in Mice with Spinal Cord Injury' [Neuroscience 364 (2017) 190-201]. Neuroscience. 2018 Jun 15;381161. doi: 10.1016/j.neuroscience.2018.04.021. PubMed PMID: 29704500; PMCID: PMC5997183.
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Moshayedi P, Thomas D, Rinaldo CR, Moossy JJ, Maroon JC, Murdoch GH, Hamilton RL, Homayoun H. Subacute histopathological features in a case of varicella zoster virus myelitis and post-herpetic neuralgia. Spinal Cord Ser Cases. 2018;433. doi: 10.1038/s41394-018-0068-5. PubMed PMID: 29707236; PMCID: PMC5884843.
Manzo JL, Cuda J, Pantanowitz L, Xing J, Yu J, Beasley HS, Dhir R, Monaco SE. Clinical trial cytology: Use of on-site evaluation of small biopsy and FNA samples for clinical trials and biomarker research studies. Cancer Cytopathol. 2018 Jul;126(7): doi: 10.1002/cncy.22001. PubMed PMID: 29719135.
Nachega JB, Sam-Agudu NA, Mofenson LM, Schechter M, Mellors JW. Reply to Kojima and Klausner. Clin Infect Dis. 2018 Oct 15;67(9):1469-1470. doi: 10.1093/cid/ciy345. PubMed PMID: 29718304; PMCID: PMC6186858.
Rudolf JW, Garcia CA, Hanna MG, Williams CL, Balis UG, Pantanowitz L, Tuthill JM, Gilbertson JR, Pathology Informatics Alumni Group.. Career Paths of Pathology Informatics Fellowship Alumni. J Pathol Inform. 2018;914. doi: 10.4103/jpi.jpi_66_17. PubMed PMID: 29721362; PMCID: PMC5907454.
Mahajan A, Selvaggi S, Pantanowitz L. Psychological Aspects of Utilizing Telecytology for Rapid On-Site Adequacy Assessments. J Pathol Inform. 2018;912. doi: 10.4103/jpi.jpi_2_18. PubMed PMID: 29721360; PMCID: PMC5907453.
Xu CL, Cantalupo PG, Sáenz-Robles MT, Baldwin A, Fitzpatrick D, Norris DE, Jackson E, Pipas JM. Draft Genome Sequence of a Novel Rhabdovirus Isolated from Deinocerites Mosquitoes. Genome Announc. 2018 May 10;6(19): doi: 10.1128/genomeA.01438-17. PubMed PMID: 29748415; PMCID: PMC5946037.
D'Aiuto L, Naciri J, Radio N, Tekur S, Clayton D, Apodaca G, Di Maio R, Zhi Y, Dimitrion P, Piazza P, Demers M, Wood J, Chu C, Callio J, McClain L, Yolken R, McNulty J, Kinchington P, Bloom D, Nimgaonkar V. Generation of three-dimensional human neuronal cultures: application to modeling CNS viral infections. Stem Cell Res Ther. 2018 May 11;9(1):134. doi: 10.1186/s13287-018-0881-6. PubMed PMID: 29751846; PMCID: PMC5948884.
Lin Q, Deslouches B, Montelaro RC, Di YP. Prevention of ESKAPE pathogen biofilm formation by antimicrobial peptides WLBU2 and LL37. Int J Antimicrob Agents. 2018 Nov;52(5):667-672. doi: 10.1016/j.ijantimicag.2018.04.019. PubMed PMID: 29753132; PMCID: PMC6230315.
Lu M, Sarkar S, Wang M, Kraus J, Fritz M, Quinn CM, Bai S, Holmes ST, Dybowski C, Yap GPA, Struppe J, Sergeyev IV, Maas W, Gronenborn AM, Polenova T. 19F Magic Angle Spinning NMR Spectroscopy and Density Functional Theory Calculations of Fluorosubstituted Tryptophans: Integrating Experiment and Theory for Accurate Determination of Chemical Shift Tensors. J Phys Chem B. 2018 Jun 14;122(23):6148-6155. doi: 10.1021/acs.jpcb.8b00377. PubMed PMID: 29756776; PMCID: PMC6203958.
Weir MC, Shu ST, Patel RK, Hellwig S, Chen L, Tan L, Gray NS, Smithgall TE. Selective Inhibition of the Myeloid Src-Family Kinase Fgr Potently Suppresses AML Cell Growth in Vitro and in Vivo. ACS Chem Biol. 2018 Jun 15;13(6):1551-1559. doi: 10.1021/acschembio.8b00154. PubMed PMID: 29763550; PMCID: PMC6130198.
Turaga KK, Clark Gamblin T, Richard Alexander H, Edwards R, Bartlett DL. Together We Make a Difference. Ann Surg Oncol. 2018 Jul;25(7):1794-1796. doi: 10.1245/s10434-018-6338-4. PubMed PMID: 29766390.
Zamora PF, Hu L, Knowlton JJ, Lahr RM, Moreno RA, Berman AJ, Prasad BVV, Dermody TS. Reovirus Nonstructural Protein σNS Acts as an RNA Stability Factor Promoting Viral Genome Replication. J Virol. 2018 Aug 1;92(15): doi: 10.1128/JVI.00563-18. PubMed PMID: 29769334; PMCID: PMC6052290.
Theodoraki MN, Yerneni S, Sarkar SN, Orr B, Muthuswamy R, Voyten J, Modugno F, Jiang W, Grimm M, Basse PH, Bartlett DL, Edwards RP, Kalinski P. Helicase-Driven Activation of NFκB-COX2 Pathway Mediates the Immunosuppressive Component of dsRNA-Driven Inflammation in the Human Tumor Microenvironment. Cancer Res. 2018 Aug 1;78(15):4292-4302. doi: 10.1158/0008-5472.CAN-17-3985. PubMed PMID: 29853604; PMCID: PMC6636317.
Li L, Han L, Sun F, Zhou J, Ohaegbulam KC, Tang X, Zang X, Steinbrecher KA, Qu Z, Xiao G. NF-κB RelA renders tumor-associated macrophages resistant to and capable of directly suppressing CD8+ T cells for tumor promotion. Oncoimmunology. 2018;7(6):e1435250. doi: 10.1080/2162402X.2018.1435250. PubMed PMID: 29872577; PMCID: PMC5980414.
Boone BA, Perkins S, Bandi R, Santos E, McCluskey K, Bartlett DL, Pingpank JF. Hepatic artery infusion of melphalan in patients with liver metastases from ocular melanoma. J Surg Oncol. 2018 Apr;117(5):940-946. doi: 10.1002/jso.24984. PubMed PMID: 29878390; PMCID: PMC6388637.
Hong F, Jacobs JL, Aga E, Cillo AR, Fyne E, Koontz DL, Zheng L, Mellors JW. Associations between HIV-1 DNA copy number, proviral transcriptional activity, and plasma viremia in individuals off or on suppressive antiretroviral therapy. Virology. 2018 Aug;52151-57. doi: 10.1016/j.virol.2018.05.018. PubMed PMID: 29879542; PMCID: PMC6279608.
Mehta S, Schwarz L, Spiliotis J, Hsieh MC, Akaishi EH, Goere D, Sugarbaker PH, Baratti D, Quenet F, Bartlett DL, Villeneuve L, Kepenekian V, PSOGI and BIG-RENAPE Working Groups.. Is there an oncological interest in the combination of CRS/HIPEC for peritoneal carcinomatosis of HCC? Results of a multicenter international study. Eur J Surg Oncol. 2018 Nov;44(11):1786-1792. doi: 10.1016/j.ejso.2018.05.021. PubMed PMID: 29885982.
Brand RM, Siegel A, Myerski A, Metter EJ, Engstrom J, Brand RE, Squiquera L, Hodge T, Sulley J, Cranston RD, McGowan I. Ranpirnase Reduces HIV-1 Infection and Associated Inflammatory Changes in a Human Colorectal Explant Model. AIDS Res Hum Retroviruses. 2018 Oct;34(10):838-848. doi: 10.1089/AID.2017.0308. PubMed PMID: 29936861.
Lopez LV, Bhattacharyya S, Carlsen ED, Bartlett D, Rao UNM. NF2 and ATRX gene copy number losses on a case of ovarian ependymoma. Hum Pathol. 2019 Jan;83204-211. doi: 10.1016/j.humpath.2018.06.019. PubMed PMID: 29944970.
Bartlett DL. Current Management and Future Opportunities for Peritoneal Metastases. Ann Surg Oncol. 2018 Aug;25(8):2132-2134. doi: 10.1245/s10434-018-6520-8. PubMed PMID: 29948419.
Vendetti FP, Karukonda P, Clump DA, Teo T, Lalonde R, Nugent K, Ballew M, Kiesel BF, Beumer JH, Sarkar SN, Conrads TP, O'Connor MJ, Ferris RL, Tran PT, Delgoffe GM, Bakkenist CJ. ATR kinase inhibitor AZD6738 potentiates CD8+ T cell-dependent antitumor activity following radiation. J Clin Invest. 2018 Aug 31;128(9):3926-3940. doi: 10.1172/JCI96519. PubMed PMID: 29952768; PMCID: PMC6118586.
Han F, Miyagawa Y, Verlengia G, Ingusci S, Soukupova M, Simonato M, Glorioso JC, Cohen JB. Cellular Antisilencing Elements Support Transgene Expression from Herpes Simplex Virus Vectors in the Absence of Immediate Early Gene Expression. J Virol. 2018 Sep 1;92(17): doi: 10.1128/JVI.00536-18. PubMed PMID: 29950408; PMCID: PMC6096828.
Wasil LR, Shair KHY. Modified Anoikis Assay That Functionally Segregates Epstein-Barr Virus LMP1 Strains into Two Groups. J Virol. 2018 Sep 15;92(18): doi: 10.1128/JVI.00557-18. PubMed PMID: 29950426; PMCID: PMC6146687.
Rotem A, Serohijos AWR, Chang CB, Wolfe JT, Fischer AE, Mehoke TS, Zhang H, Tao Y, Lloyd Ung W, Choi JM, Rodrigues JV, Kolawole AO, Koehler SA, Wu S, Thielen PM, Cui N, Demirev PA, Giacobbi NS, Julian TR, Schwab K, Lin JS, Smith TJ, Pipas JM, Wobus CE, Feldman AB, Weitz DA, Shakhnovich EI. Evolution on the Biophysical Fitness Landscape of an RNA Virus. Mol Biol Evol. 2018 Oct 1;35(10):2390-2400. doi: 10.1093/molbev/msy131. PubMed PMID: 29955873; PMCID: PMC6188569.
Lee DH, Kim D, Kim ST, Jeong S, Kim JL, Shim SM, Heo AJ, Song X, Guo ZS, Bartlett DL, Oh SC, Lee J, Saito Y, Kim BY, Kwon YT, Lee YJ. PARK7 modulates autophagic proteolysis through binding to the N-terminally arginylated form of the molecular chaperone HSPA5. Autophagy. 2018;14(11):1870-1885. doi: 10.1080/15548627.2018.1491212. PubMed PMID: 29976090; PMCID: PMC6152518.
Ruhge LL, Huet AGE, Conway JF, Smith GA. The Apical Region of the Herpes Simplex Virus Major Capsid Protein Promotes Capsid Maturation. J Virol. 2018 Sep 15;92(18): doi: 10.1128/JVI.00821-18. PubMed PMID: 29976665; PMCID: PMC6146679.
Yan Q, Zhao R, Shen C, Wang F, Li W, Gao SJ, Lu C. Upregulation of MicroRNA 711 Mediates HIV-1 Vpr Promotion of Kaposi's Sarcoma-Associated Herpesvirus Latency and Induction of Pro-proliferation and Pro-survival Cytokines by Targeting the Notch/NF-κB-Signaling Axis. J Virol. 2018 Sep 15;92(18): doi: 10.1128/JVI.00580-18. PubMed PMID: 29976660; PMCID: PMC6146700.
Tipton L, Cuenco KT, Huang L, Greenblatt RM, Kleerup E, Sciurba F, Duncan SR, Donahoe MP, Morris A, Ghedin E. Measuring associations between the microbiota and repeated measures of continuous clinical variables using a lasso-penalized generalized linear mixed model. BioData Min. 2018;1112. doi: 10.1186/s13040-018-0173-9. PubMed PMID: 29983746; PMCID: PMC6003033.
Dembowski JA, DeLuca NA. Temporal Viral Genome-Protein Interactions Define Distinct Stages of Productive Herpesviral Infection. mBio. 2018 Jul 17;9(4): doi: 10.1128/mBio.01182-18. PubMed PMID: 30018111; PMCID: PMC6050965.
Caves EA, Cook SA, Lee N, Stoltz D, Watkins S, Shair KHY. Air-Liquid Interface Method To Study Epstein-Barr Virus Pathogenesis in Nasopharyngeal Epithelial Cells. mSphere. 2018 Jul 18;3(4): doi: 10.1128/mSphere.00152-18. PubMed PMID: 30021875; PMCID: PMC6052337.
Gopal S, Perez E Jr, Xia AY, Knowlton JJ, Cerqueira F, Dermody TS, Upton JW. Murine cytomegalovirus M72 promotes acute virus replication in vivo and is a substrate of the TRiC/CCT complex. Virology. 2018 Sep;52292-105. doi: 10.1016/j.virol.2018.07.008. PubMed PMID: 30029015; PMCID: PMC6487667.
Kowalsky SJ, Liu Z, Feist M, Berkey SE, Ma C, Ravindranathan R, Dai E, Roy EJ, Guo ZS, Bartlett DL. Superagonist IL-15-Armed Oncolytic Virus Elicits Potent Antitumor Immunity and Therapy That Are Enhanced with PD-1 Blockade. Mol Ther. 2018 Oct 3;26(10):2476-2486. doi: 10.1016/j.ymthe.2018.07.013. PubMed PMID: 30064894; PMCID: PMC6171074.
Mark Knab L, Zenati MS, Khodakov A, Rice M, Al-Abbas A, Bartlett DL, Zureikat AH, Zeh HJ, Hogg ME. Evolution of a Novel Robotic Training Curriculum in a Complex General Surgical Oncology Fellowship. Ann Surg Oncol. 2018 Nov;25(12):3445-3452. doi: 10.1245/s10434-018-6686-0. PubMed PMID: 30073601.
Namazi G, Fajnzylber JM, Aga E, Bosch RJ, Acosta EP, Sharaf R, Hartogensis W, Jacobson JM, Connick E, Volberding P, Skiest D, Margolis D, Sneller MC, Little SJ, Gianella S, Smith DM, Kuritzkes DR, Gulick RM, Mellors JW, Mehraj V, Gandhi RT, Mitsuyasu R, Schooley RT, Henry K, Tebas P, Deeks SG, Chun TW, Collier AC, Routy JP, Hecht FM, Walker BD, Li JZ. The Control of HIV After Antiretroviral Medication Pause (CHAMP) Study: Posttreatment Controllers Identified From 14 Clinical Studies. J Infect Dis. 2018 Nov 5;218(12):1954-1963. doi: 10.1093/infdis/jiy479. PubMed PMID: 30085241; PMCID: PMC6217727.
Tenorio R, Fernández de Castro I, Knowlton JJ, Zamora PF, Lee CH, Mainou BA, Dermody TS, Risco C. Reovirus σNS and μNS Proteins Remodel the Endoplasmic Reticulum to Build Replication Neo-Organelles. mBio. 2018 Aug 7;9(4): doi: 10.1128/mBio.01253-18. PubMed PMID: 30087167; PMCID: PMC6083906.
Coyne CB. STING'ing Zika virus in neurons. Nat Microbiol. 2018 Sep;3(9):975-976. doi: 10.1038/s41564-018-0232-5. PubMed PMID: 30104582.
Artusi S, Miyagawa Y, Goins WF, Cohen JB, Glorioso JC. Herpes Simplex Virus Vectors for Gene Transfer to the Central Nervous System. Diseases. 2018 Aug 14;6(3): doi: 10.3390/diseases6030074. PubMed PMID: 30110885; PMCID: PMC6164475.
Rimm DL, Leung SCY, McShane LM, Bai Y, Bane AL, Bartlett JMS, Bayani J, Chang MC, Dean M, Denkert C, Enwere EK, Galderisi C, Gholap A, Hugh JC, Jadhav A, Kornaga EN, Laurinavicius A, Levenson R, Lima J, Miller K, Pantanowitz L, Piper T, Ruan J, Srinivasan M, Virk S, Wu Y, Yang H, Hayes DF, Nielsen TO, Dowsett M. An international multicenter study to evaluate reproducibility of automated scoring for assessment of Ki67 in breast cancer. Mod Pathol. 2019 Jan;32(1):59-69. doi: 10.1038/s41379-018-0109-4. PubMed PMID: 30143750.
Toptan T, Abere B, Nalesnik MA, Swerdlow SH, Ranganathan S, Lee N, Shair KH, Moore PS, Chang Y. Circular DNA tumor viruses make circular RNAs. Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):E8737-E8745. doi: 10.1073/pnas.1811728115. PubMed PMID: 30150410; PMCID: PMC6140489.
Rossi ED, Larocca LM, Pantanowitz L. Ancillary molecular testing of indeterminate thyroid nodules. Cancer Cytopathol. 2018 Aug;126 Suppl 8654-671. doi: 10.1002/cncy.22012. PubMed PMID: 30156775.
Lee YS, Lee DH, Jeong SY, Park SH, Oh SC, Park YS, Yu J, Choudry HA, Bartlett DL, Lee YJ. Ferroptosis-inducing agents enhance TRAIL-induced apoptosis through upregulation of death receptor 5. J Cell Biochem. 2019 Jan;120(1):928-939. doi: 10.1002/jcb.27456. PubMed PMID: 30160785; PMCID: PMC6249082.
Banerjee I, Behl B, Mendonca M, Shrivastava G, Russo AJ, Menoret A, Ghosh A, Vella AT, Vanaja SK, Sarkar SN, Fitzgerald KA, Rathinam VAK. Gasdermin D Restrains Type I Interferon Response to Cytosolic DNA by Disrupting Ionic Homeostasis. Immunity. 2018 Sep 18;49(3):413-426.e5. doi: 10.1016/j.immuni.2018.07.006. PubMed PMID: 30170814; PMCID: PMC6347470.
Nanni AV, Lee N. Identification of host RNAs that interact with EBV noncoding RNA EBER2. RNA Biol. 2018;15(9):1181-1191. doi: 10.1080/15476286.2018.1518854. PubMed PMID: 30176159; PMCID: PMC6284586.
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Gregg RW, Sarkar SN, Shoemaker JE. Mathematical modeling of the cGAS pathway reveals robustness of DNA sensing to TREX1 feedback. J Theor Biol. 2019 Feb 7;462148-157. doi: 10.1016/j.jtbi.2018.11.001. PubMed PMID: 30395807.
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Gao R, Li T, Tan B, Ramos da Silva S, Jung JU, Feng P, Gao SJ. FoxO1 Suppresses Kaposi's Sarcoma-Associated Herpesvirus Lytic Replication and Controls Viral Latency. J Virol. 2019 Feb 1;93(3): doi: 10.1128/JVI.01681-18. PubMed PMID: 30404794; PMCID: PMC6340022.
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Hartman DJ, Ahmad F, Ferris RL, Rimm DL, Pantanowitz L. Utility of CD8 score by automated quantitative image analysis in head and neck squamous cell carcinoma. Oral Oncol. 2018 Nov;86278-287. doi: 10.1016/j.oraloncology.2018.10.005. PubMed PMID: 30409313; PMCID: PMC6260977.
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Pantanowitz L, Layfield LJ, Baloch ZW. The growing demand for informatics in cytopathology. Diagn Cytopathol. 2019 Jan; doi: 10.1002/dc.24104. PubMed PMID: 30417577.
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Dietz RL, Hartman DJ, Zheng L, Wiley C, Pantanowitz L. Review of the use of telepathology for intraoperative consultation. Expert Rev Med Devices. 2018 Dec;15(12):883-890. doi: 10.1080/17434440.2018.1549987. PubMed PMID: 30451027.
Cima L, Brunelli M, Parwani A, Girolami I, Ciangherotti A, Riva G, Novelli L, Vanzo F, Sorio A, Cirielli V, Barbareschi M, D'Errico A, Scarpa A, Bovo C, Fraggetta F, Pantanowitz L, Eccher A. Validation of Remote Digital Frozen Sections for Cancer and Transplant Intraoperative Services. J Pathol Inform. 2018;934. doi: 10.4103/jpi.jpi_52_18. PubMed PMID: 30450263; PMCID: PMC6187937.
Vargas B, Giacobbi NS, Sanyal A, Venkatachari NJ, Han F, Gupta P, Sluis-Cremer N. Inhibitors of Signaling Pathways That Block Reversal of HIV-1 Latency. Antimicrob Agents Chemother. 2019 Feb;63(2): doi: 10.1128/AAC.01744-18. PubMed PMID: 30455231; PMCID: PMC6355603.
Mosquera-Zamudio A, Hanna MG, Parra-Medina R, Piedrahita AC, Rodriguez-Urrego PA, Pantanowitz L. Advantage of Z-stacking for teleconsultation between the USA and Colombia. Diagn Cytopathol. 2019 Jan;47(1):35-40. doi: 10.1002/dc.23992. PubMed PMID: 30457226.
Li T, Zhu Y, Cheng F, Lu C, Jung JU, Gao SJ. Oncogenic Kaposi's Sarcoma-Associated Herpesvirus Upregulates Argininosuccinate Synthase 1, a Rate-Limiting Enzyme of the Citrulline-Nitric Oxide Cycle, To Activate the STAT3 Pathway and Promote Growth Transformation. J Virol. 2019 Feb 15;93(4): doi: 10.1128/JVI.01599-18. PubMed PMID: 30463977; PMCID: PMC6364034.
Jo VY, Krane JF, Pantanowitz L, Monaco SE. HPV-associated neuroendocrine carcinomas of the head and neck in FNA biopsies: Clinicopathologic features of a rare entity. Cancer Cytopathol. 2019 Feb;127(1):26-34. doi: 10.1002/cncy.22075. PubMed PMID: 30475447.
Majima T, Mori K, Kadekawa K, Takai S, Funahashi Y, Reinhart B, Goins WF, Gotoh M, Glorioso JC, Yoshimura N. The effect of herpes simplex virus vector-mediated gene therapy of protein phosphatase 1α on bladder overactivity and nociception. Neurourol Urodyn. 2019 Feb;38(2):582-590. doi: 10.1002/nau.23882. PubMed PMID: 30499116.
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Grabosch S, Bulatovic M, Zeng F, Ma T, Zhang L, Ross M, Brozick J, Fang Y, Tseng G, Kim E, Gambotto A, Elishaev E, P Edwards R, Vlad AM. Cisplatin-induced immune modulation in ovarian cancer mouse models with distinct inflammation profiles. Oncogene. 2019 Mar;38(13):2380-2393. doi: 10.1038/s41388-018-0581-9. PubMed PMID: 30518877; PMCID: PMC6440870.
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Khatun H, Yamaoka Y, Matsushima Y, Matsunaga S, Kimura H, Ho J, Shuda M, Ryo A. Production and characterization of monoclonal antibodies specific for major capsid VP1 protein of trichodysplasia spinulosa-associated polyomavirus. Microbiol Immunol. 2018 Dec;62(12):763-773. doi: 10.1111/1348-0421.12662. PubMed PMID: 30537287.
McMillen CM, Arora N, Boyles DA, Albe JR, Kujawa MR, Bonadio JF, Coyne CB, Hartman AL. Rift Valley fever virus induces fetal demise in Sprague-Dawley rats through direct placental infection. Sci Adv. 2018 Dec;4(12):eaau9812. doi: 10.1126/sciadv.aau9812. PubMed PMID: 30525107; PMCID: PMC6281433.
Garcia-Bates TM, Palma ML, Shen C, Gambotto A, Macatangay BJC, Ferris RL, Rinaldo CR, Mailliard RB. Contrasting Roles of the PD-1 Signaling Pathway in Dendritic Cell-Mediated Induction and Regulation of HIV-1-Specific Effector T Cell Functions. J Virol. 2019 Mar 1;93(5): doi: 10.1128/JVI.02035-18. PubMed PMID: 30541848; PMCID: PMC6384070.
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Toptan T, Brusadelli MG, Turpin B, Witte DP, Surrallés J, Velleuer E, Schramm M, Dietrich R, Brakenhoff RH, Moore PS, Chang Y, Wells SI. Limited detection of human polyomaviruses in Fanconi anemia related squamous cell carcinoma. PLoS One. 2018;13(12):e0209235. doi: 10.1371/journal.pone.0209235. PubMed PMID: 30589865; PMCID: PMC6307729.
Davies G, Firnhaber C, Pantanowitz L, Michelow P. The relationship between menopausal women infected with the human immunodeficiency virus and cervical atrophy: A cytologic study. Diagn Cytopathol. 2019 Apr;47(4):302-306. doi: 10.1002/dc.24092. PubMed PMID: 30588777.
Monaco SE, Koah AE, Xing J, Ahmed I, Cuda J, Cunningham J, Metahri D, Progar A, Pantanowitz L. Telecytology implementation: Deployment of telecytology for rapid on-site evaluations at an Academic Medical Center. Diagn Cytopathol. 2019 Mar;47(3):206-213. doi: 10.1002/dc.24077. PubMed PMID: 30588767.
Zhang SY, Zhang SW, Fan XN, Meng J, Chen Y, Gao SJ, Huang Y. Global analysis of N6-methyladenosine functions and its disease association using deep learning and network-based methods. PLoS Comput Biol. 2019 Jan;15(1):e1006663. doi: 10.1371/journal.pcbi.1006663. PubMed PMID: 30601803; PMCID: PMC6331136.
Pantanowitz L, Sharma A, Carter AB, Kurc T, Sussman A, Saltz J. Twenty Years of Digital Pathology: An Overview of the Road Travelled, What is on the Horizon, and the Emergence of Vendor-Neutral Archives. J Pathol Inform. 2018;940. doi: 10.4103/jpi.jpi_69_18. PubMed PMID: 30607307; PMCID: PMC6289005.
Tizhoosh HR, Pantanowitz L. Artificial Intelligence and Digital Pathology: Challenges and Opportunities. J Pathol Inform. 2018;938. doi: 10.4103/jpi.jpi_53_18. PubMed PMID: 30607305; PMCID: PMC6289004.
Liu Y, Pantanowitz L. Digital pathology: Review of current opportunities and challenges for oral pathologists. J Oral Pathol Med. 2019 Apr;48(4):263-269. doi: 10.1111/jop.12825. PubMed PMID: 30618114.
An P, Sáenz Robles MT, Duray AM, Cantalupo PG, Pipas JM. Human polyomavirus BKV infection of endothelial cells results in interferon pathway induction and persistence. PLoS Pathog. 2019 Jan;15(1):e1007505. doi: 10.1371/journal.ppat.1007505. PubMed PMID: 30620752; PMCID: PMC6338385.
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Guo ZS, Lu B, Guo Z, Giehl E, Feist M, Dai E, Liu W, Storkus WJ, He Y, Liu Z, Bartlett DL. Vaccinia virus-mediated cancer immunotherapy: cancer vaccines and oncolytics. J Immunother Cancer. 2019 Jan 9;7(1):6. doi: 10.1186/s40425-018-0495-7. PubMed PMID: 30626434; PMCID: PMC6325819.
Tosiano MA, Jacobs JL, Shutt KA, Cyktor JC, Mellors JW. A Simpler and More Sensitive Single-Copy HIV-1 RNA Assay for Quantification of Persistent HIV-1 Viremia in Individuals on Suppressive Antiretroviral Therapy. J Clin Microbiol. 2019 Mar;57(3): doi: 10.1128/JCM.01714-18. PubMed PMID: 30626659; PMCID: PMC6425167.
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Kramer PR, Rao M, Stinson C, Bellinger LL, Kinchington PR, Yee MB. Corrigendum: Aromatase Derived Estradiol Within the Thalamus Modulates Pain Induced by Varicella Zoster Virus. Front Integr Neurosci. 2018;1266. doi: 10.3389/fnint.2018.00066. PubMed PMID: 30766482; PMCID: PMC6366361.
Hsu DC, Mellors JW. Longitudinal changes in HIV DNA in HIV controllers: what do they mean? J Int AIDS Soc. 2019 Feb;22(2):e25254. doi: 10.1002/jia2.25254. PubMed PMID: 30768753; PMCID: PMC6376800.
Bozkurt E, Gronenborn AM. Diversifying Constrained Peptide Scaffolds: How To Truss Up a Bundle Really Tight. Biochemistry. 2019 Mar 5;58(9):1179-1180. doi: 10.1021/acs.biochem.9b00065. PubMed PMID: 30785728.
Tiwari A, Swamynathan S, Alexander N, Gnalian J, Tian S, Kinchington PR, Swamynathan SK. KLF4 Regulates Corneal Epithelial Cell Cycle Progression by Suppressing Canonical TGF-β Signaling and Upregulating CDK Inhibitors P16 and P27. Invest Ophthalmol Vis Sci. 2019 Feb 1;60(2):731-740. doi: 10.1167/iovs.18-26423. PubMed PMID: 30786277; PMCID: PMC6383833.
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Tang B, Guo ZS, Bartlett DL, Liu J, McFadden G, Shisler JL, Roy EJ. A cautionary note on the selectivity of oncolytic poxviruses. Oncolytic Virother. 2019;83-8. doi: 10.2147/OV.S189832. PubMed PMID: 30805315; PMCID: PMC6375109.
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Pipas JM. DNA Tumor Viruses and Their Contributions to Molecular Biology. J Virol. 2019 May 1;93(9): doi: 10.1128/JVI.01524-18. PubMed PMID: 30814278; PMCID: PMC6475781.
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Barr JA, Hayes KE, Brownmiller T, Harold AD, Jagannathan R, Lockman PR, Khan S, Martinez I. Long non-coding RNA FAM83H-AS1 is regulated by human papillomavirus 16 E6 independently of p53 in cervical cancer cells. Sci Rep. 2019 Mar 6;9(1):3662. doi: 10.1038/s41598-019-40094-8. PubMed PMID: 30842470; PMCID: PMC6403315.
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Dermody TS, Hirsch R, Hostetter MK, Orange JS, St Geme JW 3rd. Expanding the Pipeline for Pediatric Physician-Scientists. J Pediatr. 2019 Apr;2073-7.e1. doi: 10.1016/j.jpeds.2019.01.025. PubMed PMID: 30922503.
Kristoff J, Palma ML, Garcia-Bates TM, Shen C, Sluis-Cremer N, Gupta P, Rinaldo CR, Mailliard RB. Type 1-programmed dendritic cells drive antigen-specific latency reversal and immune elimination of persistent HIV-1. EBioMedicine. 2019 May;43295-306. doi: 10.1016/j.ebiom.2019.03.077. PubMed PMID: 30952614; PMCID: PMC6557749.
Rossi ED, Faquin WC, Baloch Z, Fadda G, Thompson L, Larocca LM, Pantanowitz L. Noninvasive Follicular Thyroid Neoplasm with Papillary-Like Nuclear Features (NIFTP): Update and Diagnostic Considerations-a Review. Endocr Pathol. 2019 Jun;30(2):155-162. doi: 10.1007/s12022-019-9574-7. PubMed PMID: 30953289; PMCID: PMC7477663.
LaFramboise WA, Pai RK, Petrosko P, Belsky MA, Dhir A, Howard PG, Becich MJ, Holtzman MP, Ahrendt SA, Pingpank JF, Zeh HJ, Dhir R, Bartlett DL, Choudry HA. Discrimination of low- and high-grade appendiceal mucinous neoplasms by targeted sequencing of cancer-related variants. Mod Pathol. 2019 Jul;32(8):1197-1209. doi: 10.1038/s41379-019-0256-2. PubMed PMID: 30962504.
Farchoukh L, Pantanowitz L, Xing J, Monaco SE. Azzopardi Phenomenon Associated with Small Cell Carcinoma. Diagn Cytopathol. 2019 Aug;47(8):837-838. doi: 10.1002/dc.24188. PubMed PMID: 30963714.
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Singhi AD, Nikiforova MN, Chennat J, Papachristou GI, Khalid A, Rabinovitz M, Das R, Sarkaria S, Ayasso MS, Wald AI, Monaco SE, Nalesnik M, Ohori NP, Geller D, Tsung A, Zureikat AH, Zeh H, Marsh JW, Hogg M, Lee K, Bartlett DL, Pingpank JF, Humar A, Bahary N, Dasyam AK, Brand R, Fasanella KE, McGrath K, Slivka A. Integrating next-generation sequencing to endoscopic retrograde cholangiopancreatography (ERCP)-obtained biliary specimens improves the detection and management of patients with malignant bile duct strictures. Gut. 2020 Jan;69(1):52-61. doi: 10.1136/gutjnl-2018-317817. PubMed PMID: 30971436; PMCID: PMC6943248.
Emery SP, Greene S, Murdoch G, Wiley CA. Histologic Appearance of Iatrogenic Obstructive Hydrocephalus in the Fetal Lamb Model. Fetal Diagn Ther. 2020;47(1):7-14. doi: 10.1159/000497360. PubMed PMID: 30974442.
Rosenbloom DIS, Bacchetti P, Stone M, Deng X, Bosch RJ, Richman DD, Siliciano JD, Mellors JW, Deeks SG, Ptak RG, Hoh R, Keating SM, Dimapasoc M, Massanella M, Lai J, Sobolewski MD, Kulpa DA, Busch MP, Reservoir Assay Validation and Evaluation Network (RAVEN) Study Group.. Assessing intra-lab precision and inter-lab repeatability of outgrowth assays of HIV-1 latent reservoir size. PLoS Comput Biol. 2019 Apr;15(4):e1006849. doi: 10.1371/journal.pcbi.1006849. PubMed PMID: 30978183; PMCID: PMC6481870.
Frigerio A, Toptan T, Chang Y, Abbott J, Cipriano SD, Bowen AR. Widespread keratosis pilaris-like eruption in an immunocompromised child. JAAD Case Rep. 2019 Apr;5(4):352-354. doi: 10.1016/j.jdcr.2019.02.001. PubMed PMID: 31008165; PMCID: PMC6453831.
Gaydosik AM, Tabib T, Geskin LJ, Bayan CA, Conway JF, Lafyatis R, Fuschiotti P. Single-Cell Lymphocyte Heterogeneity in Advanced Cutaneous T-cell Lymphoma Skin Tumors. Clin Cancer Res. 2019 Jul 15;25(14):4443-4454. doi: 10.1158/1078-0432.CCR-19-0148. PubMed PMID: 31010835; PMCID: PMC6635080.
Butterfield LH, Vujanovic L, Santos PM, Maurer DM, Gambotto A, Lohr J, Li C, Waldman J, Chandran U, Lin Y, Lin H, Tawbi HA, Tarhini AA, Kirkwood JM. Multiple antigen-engineered DC vaccines with or without IFNα to promote antitumor immunity in melanoma. J Immunother Cancer. 2019 Apr 24;7(1):113. doi: 10.1186/s40425-019-0552-x. PubMed PMID: 31014399; PMCID: PMC6480917.
Newsome JT, Clemmons EA, Fitzhugh DC, Gluckman TL, Creamer-Hente MA, Tambrallo LJ, Wilder-Kofie T. Compassion Fatigue, Euthanasia Stress, and Their Management in Laboratory Animal Research. J Am Assoc Lab Anim Sci. 2019 May 1;58(3):289-292. doi: 10.30802/AALAS-JAALAS-18-000092. PubMed PMID: 31014414; PMCID: PMC6526492.
Turaga KK, Gamblin TC, Edwards R, Alexander HR, Bartlett D. It Is Time. Ann Surg Oncol. 2019 Jul;26(7):1963-1966. doi: 10.1245/s10434-019-07207-z. PubMed PMID: 31037435.
Maleki Z, Baloch Z, Lu R, Shafique K, Song SJ, Viswanathan K, Rao RA, Lefler H, Fatima A, Wiles A, Jo VY, Wang H, Fadda G, Powers CN, Ali SZ, Pantanowitz L, Siddiqui MT, Nayar R, Klijanienko J, Barkan GA, Krane JF, Rossi ED, Callegari F, Kholová I, Bongiovanni M, Faquin WC, Pusztaszeri MP. Application of the Milan System for Reporting Submandibular Gland Cytopathology: An international, multi-institutional study. Cancer Cytopathol. 2019 May;127(5):306-315. doi: 10.1002/cncy.22135. PubMed PMID: 31050186; PMCID: PMC7404554.
Keating SM, Jones RB, Lalama CM, Bosch RJ, McMahon D, Hampton D, Cyktor J, Eron JJ, Mellors JW, Busch MP, Gandhi RT, ACTG 5321 Team.. Brief Report: HIV Antibodies Decline During Antiretroviral Therapy but Remain Correlated With HIV DNA and HIV-Specific T-Cell Responses. J Acquir Immune Defic Syndr. 2019 Aug 15;81(5):594-599. doi: 10.1097/QAI.0000000000002080. PubMed PMID: 31045647; PMCID: PMC6625873.
Lakdawala SS, Lee N, Brooke CB. Teaching an Old Virus New Tricks: A Review on New Approaches to Study Age-Old Questions in Influenza Biology. J Mol Biol. 2019 Oct 4;431(21):4247-4258. doi: 10.1016/j.jmb.2019.04.038. PubMed PMID: 31051174; PMCID: PMC6821588.
Chlipala EA, DeGeer T, Dwyer K, Ganske S, Krull D, Lara H, Manning L, Steiner D, Stephens L, Sterchi D, Wanner A, Wildeman C, Pantanowitz L. National Society for Histotechnology and Digital Pathology Association Online Self-Paced Digital Pathology Certificate of Completion Program. J Pathol Inform. 2019;1014. doi: 10.4103/jpi.jpi_5_19. PubMed PMID: 31057983; PMCID: PMC6489421.
Peters JM, Kim DJ, Bility MT, Borland MG, Zhu B, Gonzalez FJ. Regulatory mechanisms mediated by peroxisome proliferator-activated receptor-β/δ in skin cancer. Mol Carcinog. 2019 Sep;58(9):1612-1622. doi: 10.1002/mc.23033. PubMed PMID: 31062422; PMCID: PMC6692234.
Glaubius R, Ding Y, Penrose KJ, Hood G, Engquist E, Mellors JW, Parikh UM, Abbas UL. Dapivirine vaginal ring for HIV prevention: modelling health outcomes, drug resistance and cost-effectiveness. J Int AIDS Soc. 2019 May;22(5):e25282. doi: 10.1002/jia2.25282. PubMed PMID: 31074936; PMCID: PMC6510112.
Guseman AJ, Gronenborn AM. Isomerization as the secret Achilles' heel of long-lived proteins. J Biol Chem. 2019 May 10;294(19):7556-7557. doi: 10.1074/jbc.H119.008716. PubMed PMID: 31076522; PMCID: PMC6514620.
Gruffaz M, Yuan H, Meng W, Liu H, Bae S, Kim JS, Lu C, Huang Y, Gao SJ. CRISPR-Cas9 Screening of Kaposi's Sarcoma-Associated Herpesvirus-Transformed Cells Identifies XPO1 as a Vulnerable Target of Cancer Cells. mBio. 2019 May 14;10(3): doi: 10.1128/mBio.00866-19. PubMed PMID: 31088931; PMCID: PMC6520457.
Campbell WW, Kraus WE, Powell KE, Haskell WL, Janz KF, Jakicic JM, Troiano RP, Sprow K, Torres A, Piercy KL, Bartlett DB, 2018 PHYSICAL ACTIVITY GUIDELINES ADVISORY COMMITTEE*.. High-Intensity Interval Training for Cardiometabolic Disease Prevention. Med Sci Sports Exerc. 2019 Jun;51(6):1220-1226. doi: 10.1249/MSS.0000000000001934. PubMed PMID: 31095079; PMCID: PMC6777577.
Choudry HA, Pai RK, Parimi A, Jones HL, Pingpank JF, Ahrendt SS, Holtzman MP, Bartlett DL. Discordant Diagnostic Terminology and Pathologic Grading of Primary Appendiceal Mucinous Neoplasms Reviewed at a High-Volume Center. Ann Surg Oncol. 2019 Aug;26(8):2607-2614. doi: 10.1245/s10434-019-07447-z. PubMed PMID: 31111354.
Wells AI, Coyne CB. Enteroviruses: A Gut-Wrenching Game of Entry, Detection, and Evasion. Viruses. 2019 May 21;11(5): doi: 10.3390/v11050460. PubMed PMID: 31117206; PMCID: PMC6563291.
Dell'Aquila M, Gravina C, Cocomazzi A, Capodimonti S, Musarra T, Sfregola S, Fiorentino V, Revelli L, Martini M, Fadda G, Pantanowitz L, Larocca LM, Rossi ED. A large series of hyalinizing trabecular tumors: Cytomorphology and ancillary techniques on fine needle aspiration. Cancer Cytopathol. 2019 Jun;127(6):390-398. doi: 10.1002/cncy.22139. PubMed PMID: 31135104.
Rossi ED, Pantanowitz L. International perspectives in cytology: Contributions from around the world. Cancer Cytopathol. 2019 Jun;127(6):349. doi: 10.1002/cncy.22122. PubMed PMID: 31135096.
Abdel-Massih RC, Mellors JW. Telemedicine and Infectious Diseases Practice: A Leap Forward or a Step Back? Open Forum Infect Dis. 2019 May;6(5):ofz196. doi: 10.1093/ofid/ofz196. PubMed PMID: 31139674; PMCID: PMC6527083.
Chimukangara B, Lessells RJ, Rhee SY, Giandhari J, Kharsany ABM, Naidoo K, Lewis L, Cawood C, Khanyile D, Ayalew KA, Diallo K, Samuel R, Hunt G, Vandormael A, Stray-Pedersen B, Gordon M, Makadzange T, Kiepiela P, Ramjee G, Ledwaba J, Kalimashe M, Morris L, Parikh UM, Mellors JW, Shafer RW, Katzenstein D, Moodley P, Gupta RK, Pillay D, Abdool Karim SS, de Oliveira T. Trends in Pretreatment HIV-1 Drug Resistance in Antiretroviral Therapy-naive Adults in South Africa, 2000-2016: A Pooled Sequence Analysis. EClinicalMedicine. 2019 Mar;926-34. doi: 10.1016/j.eclinm.2019.03.006. PubMed PMID: 31143879; PMCID: PMC6510720.
Rossi ED, Faquin WC, Pantanowitz L. Cytologic features of aggressive variants of follicular-derived thyroid carcinoma. Cancer Cytopathol. 2019 Jul;127(7):432-446. doi: 10.1002/cncy.22136. PubMed PMID: 31150164; PMCID: PMC7478176.
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Sun R, Cheng E, Velásquez C, Chang Y, Moore PS. Mitosis-related phosphorylation of the eukaryotic translation suppressor 4E-BP1 and its interaction with eukaryotic translation initiation factor 4E (eIF4E). J Biol Chem. 2019 Aug 2;294(31):11840-11852. doi: 10.1074/jbc.RA119.008512. PubMed PMID: 31201269; PMCID: PMC6682726.
Coffin JM, Wells DW, Zerbato JM, Kuruc JD, Guo S, Luke BT, Eron JJ, Bale M, Spindler J, Simonetti FR, Hill S, Kearney MF, Maldarelli F, Wu X, Mellors JW, Hughes SH. Clones of infected cells arise early in HIV-infected individuals. JCI Insight. 2019 Jun 20;4(12): doi: 10.1172/jci.insight.128432. PubMed PMID: 31217357; PMCID: PMC6629130.
Stram M, Gigliotti T, Hartman D, Pitkus A, Huff SM, Riben M, Henricks WH, Farahani N, Pantanowitz L. Logical Observation Identifiers Names and Codes for Laboratorians. Arch Pathol Lab Med. 2020 Feb;144(2):229-239. doi: 10.5858/arpa.2018-0477-RA. PubMed PMID: 31219342.
Shao L, Hou W, Scharping NE, Vendetti FP, Srivastava R, Roy CN, Menk AV, Wang Y, Chauvin JM, Karukonda P, Thorne SH, Hornung V, Zarour HM, Bakkenist CJ, Delgoffe GM, Sarkar SN. IRF1 Inhibits Antitumor Immunity through the Upregulation of PD-L1 in the Tumor Cell. Cancer Immunol Res. 2019 Aug;7(8):1258-1266. doi: 10.1158/2326-6066.CIR-18-0711. PubMed PMID: 31239318; PMCID: PMC6677597.
Wang Y, Palmfeldt J, Gregersen N, Makhov AM, Conway JF, Wang M, McCalley SP, Basu S, Alharbi H, St Croix C, Calderon MJ, Watkins S, Vockley J. Mitochondrial fatty acid oxidation and the electron transport chain comprise a multifunctional mitochondrial protein complex. J Biol Chem. 2019 Aug 16;294(33):12380-12391. doi: 10.1074/jbc.RA119.008680. PubMed PMID: 31235473; PMCID: PMC6699831.
Stinson C, Logan SM, Bellinger LL, Rao M, Kinchington PR, Kramer PR. Estradiol Acts in Lateral Thalamic Region to Attenuate Varicella Zoster Virus Associated Affective Pain. Neuroscience. 2019 Aug 21;41499-111. doi: 10.1016/j.neuroscience.2019.06.029. PubMed PMID: 31271831; PMCID: PMC6944200.
Landau MS, Pantanowitz L. Artificial intelligence in cytopathology: a review of the literature and overview of commercial landscape. J Am Soc Cytopathol. 2019 Jul - Aug;8(4):230-241. doi: 10.1016/j.jasc.2019.03.003. PubMed PMID: 31272605.
Hanna MG, Pantanowitz L. Feasibility of using the Omnyx digital pathology system for cytology practice. J Am Soc Cytopathol. 2019 Jul - Aug;8(4):182-189. doi: 10.1016/j.jasc.2019.01.003. PubMed PMID: 31272601.
Ambinder RF, Wu J, Logan B, Durand CM, Shields R, Popat UR, Little RF, McMahon DK, Cyktor J, Mellors JW, Ayala E, Kaplan LD, Noy A, Jones RJ, Howard A, Forman SJ, Porter D, Arce-Lara C, Shaughnessy P, Sproat L, Hashmi SK, Mendizabal AM, Horowitz MM, Navarro WH, Alvarnas JC. Allogeneic Hematopoietic Cell Transplant for HIV Patients with Hematologic Malignancies: The BMT CTN-0903/AMC-080 Trial. Biol Blood Marrow Transplant. 2019 Nov;25(11):2160-2166. doi: 10.1016/j.bbmt.2019.06.033. PubMed PMID: 31279752; PMCID: PMC6907401.
Macatangay BJC, Jackson EK, Abebe KZ, Comer D, Cyktor J, Klamar-Blain C, Borowski L, Gillespie DG, Mellors JW, Rinaldo CR, Riddler SA. A Randomized, Placebo-Controlled, Pilot Clinical Trial of Dipyridamole to Decrease Human Immunodeficiency Virus-Associated Chronic Inflammation. J Infect Dis. 2020 Apr 27;221(10):1598-1606. doi: 10.1093/infdis/jiz344. PubMed PMID: 31282542; PMCID: PMC7184919.
Xing J, Qi Y, Monaco SE, Pantanowitz L. Determination of appropriate urine volume cutoff values for voided urine specimens to assess adequacy. J Am Soc Cytopathol. 2019 Mar - Apr;8(2):89-94. doi: 10.1016/j.jasc.2018.10.004. PubMed PMID: 31287425.
Dantey K, Pantanowitz L, Xing J, Cuda J, Nestler R, Monaco SE. Cell block preparation in urine cytology: examination of utility and workflow in an academic practice. J Am Soc Cytopathol. 2019 Mar - Apr;8(2):61-68. doi: 10.1016/j.jasc.2018.11.001. PubMed PMID: 31287421.
Fan K, Gravemeyer J, Ritter C, Rasheed K, Gambichler T, Moens U, Shuda M, Schrama D, Becker JC. MCPyV Large T Antigen-Induced Atonal Homolog 1 Is a Lineage-Dependency Oncogene in Merkel Cell Carcinoma. J Invest Dermatol. 2020 Jan;140(1):56-65.e3. doi: 10.1016/j.jid.2019.06.135. PubMed PMID: 31283928.
Wirsching HG, Zhang H, Szulzewsky F, Arora S, Grandi P, Cimino PJ, Amankulor N, Campbell JS, McFerrin L, Pattwell SS, Ene C, Hicks A, Ball M, Yan J, Zhang J, Kumasaka D, Pierce RH, Weller M, Finer M, Quéva C, Glorioso JC, Houghton AM, Holland EC. Arming oHSV with ULBP3 drives abscopal immunity in lymphocyte-depleted glioblastoma. JCI Insight. 2019 Jul 11;4(13): doi: 10.1172/jci.insight.128217. PubMed PMID: 31292299; PMCID: PMC6629248.
Li T, Ju E, Gao SJ. Kaposi sarcoma-associated herpesvirus miRNAs suppress CASTOR1-mediated mTORC1 inhibition to promote tumorigenesis. J Clin Invest. 2019 Jul 15;129(8):3310-3323. doi: 10.1172/JCI127166. PubMed PMID: 31305263; PMCID: PMC6668677.
Spudich S, Robertson KR, Bosch RJ, Gandhi RT, Cyktor JC, Mar H, Macatangay BJ, Lalama CM, Rinaldo C, Collier AC, Godfrey C, Eron JJ, McMahon D, Jacobs JL, Koontz D, Hogg E, Vecchio A, Mellors JW. Persistent HIV-infected cells in cerebrospinal fluid are associated with poorer neurocognitive performance. J Clin Invest. 2019 Jul 15;129(8):3339-3346. doi: 10.1172/JCI127413. PubMed PMID: 31305262; PMCID: PMC6668666.
Rappocciolo G, Sluis-Cremer N, Rinaldo CR. Efficient HIV-1 Trans Infection of CD4+ T Cells Occurs in the Presence of Antiretroviral Therapy. Open Forum Infect Dis. 2019 Jul;6(7):ofz253. doi: 10.1093/ofid/ofz253. PubMed PMID: 31304185; PMCID: PMC6613953.
Bedimo RJ, Mar H, Bosch RJ, Drechsler H, Cyktor JC, Macatangay BJC, Lalama C, Rinaldo C Jr, Collier A, Godfrey C, Hogg E, Hensel C, Eron JJ, Mcmahon DK, Mellors JW, Tebas P, Gandhi RT, A5321 Study Team.. Brief Report: No Evidence for an Association Between Statin Use and Lower Biomarkers of HIV Persistence or Immune Activation/Inflammation During Effective ART. J Acquir Immune Defic Syndr. 2019 Oct 1;82(2):e27-e31. doi: 10.1097/QAI.0000000000002124. PubMed PMID: 31335587; PMCID: PMC6799994.
Khattab RA, Rowe JJ, Booth CN, Sneige N, Fong N, Pantanowitz L, Oshilaja O, Brainard JA, Downs-Kelly EP, Dawson A, Sturgis CD. Mammary mesenchymal and fibroepithelial lesions: An illustrated cytomorphologic update with differential diagnoses. Diagn Cytopathol. 2019 Oct;47(10):1100-1118. doi: 10.1002/dc.24288. PubMed PMID: 31343114.
Abels E, Pantanowitz L, Aeffner F, Zarella MD, van der Laak J, Bui MM, Vemuri VN, Parwani AV, Gibbs J, Agosto-Arroyo E, Beck AH, Kozlowski C. Computational pathology definitions, best practices, and recommendations for regulatory guidance: a white paper from the Digital Pathology Association. J Pathol. 2019 Nov;249(3):286-294. doi: 10.1002/path.5331. PubMed PMID: 31355445; PMCID: PMC6852275.
McManus WR, Bale MJ, Spindler J, Wiegand A, Musick A, Patro SC, Sobolewski MD, Musick VK, Anderson EM, Cyktor JC, Halvas EK, Shao W, Wells D, Wu X, Keele BF, Milush JM, Hoh R, Mellors JW, Hughes SH, Deeks SG, Coffin JM, Kearney MF. HIV-1 in lymph nodes is maintained by cellular proliferation during antiretroviral therapy. J Clin Invest. 2019 Jul 30;129(11):4629-4642. doi: 10.1172/JCI126714. PubMed PMID: 31361603; PMCID: PMC6819093.
Enomoto LM, Choudry MH, Bartlett DL, Totin L, Mann GN, Skitzki JJ, Perry KC, Votanopoulos KI, Levine EA, Shen P. Outcomes After Adjuvant Hyperthermic Intraperitoneal Chemotherapy for High-Risk Primary Appendiceal Neoplasms After Complete Resection. Ann Surg Oncol. 2020 Jan;27(1):107-114. doi: 10.1245/s10434-019-07634-y. PubMed PMID: 31368017.
Girolami I, Parwani A, Barresi V, Marletta S, Ammendola S, Stefanizzi L, Novelli L, Capitanio A, Brunelli M, Pantanowitz L, Eccher A. The Landscape of Digital Pathology in Transplantation: From the Beginning to the Virtual E-Slide. J Pathol Inform. 2019;1021. doi: 10.4103/jpi.jpi_27_19. PubMed PMID: 31367473; PMCID: PMC6639852.
Grinsztejn B, Hughes MD, Ritz J, Salata R, Mugyenyi P, Hogg E, Wieclaw L, Gross R, Godfrey C, Cardoso SW, Bukuru A, Makanga M, Faesen S, Mave V, Wangari Ndege B, Nerette Fontain S, Samaneka W, Secours R, van Schalkwyk M, Mngqibisa R, Mohapi L, Valencia J, Sugandhavesa P, Montalban E, Avihingsanon A, Santos BR, Kumarasamy N, Kanyama C, Schooley RT, Mellors JW, Wallis CL, Collier AC, A5288 Team.. Third-line antiretroviral therapy in low-income and middle-income countries (ACTG A5288): a prospective strategy study. Lancet HIV. 2019 Sep;6(9):e588-e600. doi: 10.1016/S2352-3018(19)30146-8. PubMed PMID: 31371262; PMCID: PMC6857629.
Solomon D, Bekhor E, Leigh N, Maniar YM, Totin L, Hofstedt M, Aycart SN, Carr J, Ballentine S, Magge DR, Golas BJ, Pai RK, Polydorides AD, Bartlett DL, Labow DM, Choudry HA, Sarpel U. Surveillance of Low-Grade Appendiceal Mucinous Neoplasms With Peritoneal Metastases After Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemotherapy: Are 5 Years Enough? A Multisite Experience. Ann Surg Oncol. 2020 Jan;27(1):147-153. doi: 10.1245/s10434-019-07678-0. PubMed PMID: 31385130.
Laemmle L, Goldstein RS, Kinchington PR. Modeling Varicella Zoster Virus Persistence and Reactivation - Closer to Resolving a Perplexing Persistent State. Front Microbiol. 2019;101634. doi: 10.3389/fmicb.2019.01634. PubMed PMID: 31396173; PMCID: PMC6667558.
Barroso-González J, García-Expósito L, Hoang SM, Lynskey ML, Roncaioli JL, Ghosh A, Wallace CT, de Vitis M, Modesti M, Bernstein KA, Sarkar SN, Watkins SC, O'Sullivan RJ. RAD51AP1 Is an Essential Mediator of Alternative Lengthening of Telomeres. Mol Cell. 2019 Oct 3;76(1):11-26.e7. doi: 10.1016/j.molcel.2019.06.043. PubMed PMID: 31400850; PMCID: PMC6778027.
Mukherjee M, Donnelly A, Rose B, Warren DE, Lyden E, Chantziantoniou N, Dimmitt B, Varley K, Pantanowitz L. Eye tracking in cytotechnology education: "visualizing" students becoming experts. J Am Soc Cytopathol. 2020 Mar - Apr;9(2):76-83. doi: 10.1016/j.jasc.2019.07.002. PubMed PMID: 31401035.
Wirsching HG, Arora S, Zhang H, Szulzewsky F, Cimino PJ, Quéva C, Houghton AM, Glorioso JC, Weller M, Holland EC. Cooperation of oncolytic virotherapy with VEGF-neutralizing antibody treatment in IDH wildtype glioblastoma depends on MMP9. Neuro Oncol. 2019 Dec 17;21(12):1607-1609. doi: 10.1093/neuonc/noz145. PubMed PMID: 31412117; PMCID: PMC6917394.
Sanghvi AB, Allen EZ, Callenberg KM, Pantanowitz L. Performance of an artificial intelligence algorithm for reporting urine cytopathology. Cancer Cytopathol. 2019 Oct;127(10):658-666. doi: 10.1002/cncy.22176. PubMed PMID: 31412169.
Sanyal A, Rangachar VS, Gupta P. TZA, a Sensitive Reporter Cell-based Assay to Accurately and Rapidly Quantify Inducible, Replication-competent Latent HIV-1 from Resting CD4+ T Cells. Bio Protoc. 2019 May 20;9(10): doi: 10.21769/BioProtoc.3232. PubMed PMID: 31428662; PMCID: PMC6699756.
Lu M, Ishima R, Polenova T, Gronenborn AM. 19F NMR relaxation studies of fluorosubstituted tryptophans. J Biomol NMR. 2019 Sep;73(8-9):401-409. doi: 10.1007/s10858-019-00268-y. PubMed PMID: 31435857; PMCID: PMC6878660.
Veldsman KA, Janse van Rensburg A, Isaacs S, Naidoo S, Laughton B, Lombard C, Cotton MF, Mellors JW, van Zyl GU. HIV-1 DNA decay is faster in children who initiate ART shortly after birth than later. J Int AIDS Soc. 2019 Aug;22(8):e25368. doi: 10.1002/jia2.25368. PubMed PMID: 31441231; PMCID: PMC6868516.
Peterson ST, Kennedy EA, Brigleb PH, Taylor GM, Urbanek K, Bricker TL, Lee S, Shin H, Dermody TS, Boon ACM, Baldridge MT. Disruption of Type III Interferon (IFN) Genes Ifnl2 and Ifnl3 Recapitulates Loss of the Type III IFN Receptor in the Mucosal Antiviral Response. J Virol. 2019 Nov 15;93(22): doi: 10.1128/JVI.01073-19. PubMed PMID: 31462571; PMCID: PMC6819914.
Byeon IL, Jung J, Byeon CH, DeLucia M, Ahn J, Gronenborn AM. Complete 1H, 13C, 15N resonance assignments and secondary structure of the Vpr binding region of hHR23A (residues 223-363). Biomol NMR Assign. 2020 Apr;14(1):13-17. doi: 10.1007/s12104-019-09913-x. PubMed PMID: 31463759; PMCID: PMC7047585.
Cantalupo PG, Pipas JM. Detecting viral sequences in NGS data. Curr Opin Virol. 2019 Dec;3941-48. doi: 10.1016/j.coviro.2019.07.010. PubMed PMID: 31465960.
Ju E, Li T, Ramos da Silva S, Gao SJ. Gold Nanocluster-Mediated Efficient Delivery of Cas9 Protein through pH-Induced Assembly-Disassembly for Inactivation of Virus Oncogenes. ACS Appl Mater Interfaces. 2019 Sep 25;11(38):34717-34724. doi: 10.1021/acsami.9b12335. PubMed PMID: 31469541; PMCID: PMC6763369.
Rivadeneira DB, DePeaux K, Wang Y, Kulkarni A, Tabib T, Menk AV, Sampath P, Lafyatis R, Ferris RL, Sarkar SN, Thorne SH, Delgoffe GM. Oncolytic Viruses Engineered to Enforce Leptin Expression Reprogram Tumor-Infiltrating T Cell Metabolism and Promote Tumor Clearance. Immunity. 2019 Sep 17;51(3):548-560.e4. doi: 10.1016/j.immuni.2019.07.003. PubMed PMID: 31471106; PMCID: PMC6903394.
Forero A, Ozarkar S, Li H, Lee CH, Hemann EA, Nadjsombati MS, Hendricks MR, So L, Green R, Roy CN, Sarkar SN, von Moltke J, Anderson SK, Gale M Jr, Savan R. Differential Activation of the Transcription Factor IRF1 Underlies the Distinct Immune Responses Elicited by Type I and Type III Interferons. Immunity. 2019 Sep 17;51(3):451-464.e6. doi: 10.1016/j.immuni.2019.07.007. PubMed PMID: 31471108; PMCID: PMC7447158.
Boltz VF, Shao W, Bale MJ, Halvas EK, Luke B, McIntyre JA, Schooley RT, Lockman S, Currier JS, Sawe F, Hogg E, Hughes MD, Kearney MF, Coffin JM, Mellors JW. Linked dual-class HIV resistance mutations are associated with treatment failure. JCI Insight. 2019 Oct 3;4(19): doi: 10.1172/jci.insight.130118. PubMed PMID: 31487271; PMCID: PMC6795402.
Shao W, Shan J, Hu WS, Halvas EK, Mellors JW, Coffin JM, Kearney MF. HIV Proviral Sequence Database: A New Public Database for Near Full-Length HIV Proviral Sequences and Their Meta-Analyses. AIDS Res Hum Retroviruses. 2020 Jan;36(1):1-3. doi: 10.1089/AID.2019.0214. PubMed PMID: 31502467; PMCID: PMC6944138.
Asa SL, Bodén AC, Treanor D, Jarkman S, Lundström C, Pantanowitz L. 2020 Vision of Digital Pathology in Action. J Pathol Inform. 2019;1027. doi: 10.4103/jpi.jpi_31_19. PubMed PMID: 31516758; PMCID: PMC6704755.
Yazdani HO, Roy E, Comerci AJ, van der Windt DJ, Zhang H, Huang H, Loughran P, Shiva S, Geller DA, Bartlett DL, Tsung A, Sheng T, Simmons RL, Tohme S. Neutrophil Extracellular Traps Drive Mitochondrial Homeostasis in Tumors to Augment Growth. Cancer Res. 2019 Nov 1;79(21):5626-5639. doi: 10.1158/0008-5472.CAN-19-0800. PubMed PMID: 31519688; PMCID: PMC6825588.
Subramanian S, Maurer AC, Bator CM, Makhov AM, Conway JF, Turner KB, Marden JH, Vandenberghe LH, Hafenstein SL. Filling Adeno-Associated Virus Capsids: Estimating Success by Cryo-Electron Microscopy. Hum Gene Ther. 2019 Dec;30(12):1449-1460. doi: 10.1089/hum.2019.041. PubMed PMID: 31530236; PMCID: PMC6921155.
Gross R, Ritz J, Hughes MD, Salata R, Mugyenyi P, Hogg E, Wieclaw L, Godfrey C, Wallis CL, Mellors JW, Mudhune VO, Badal-Faesen S, Grinsztejn B, Collier AC. Two-way mobile phone intervention compared with standard-of-care adherence support after second-line antiretroviral therapy failure: a multinational, randomised controlled trial. Lancet Digit Health. 2019 May;1(1):e26-e34. doi: 10.1016/S2589-7500(19)30006-8. PubMed PMID: 31528850; PMCID: PMC6746315.
Harold A, Amako Y, Hachisuka J, Bai Y, Li MY, Kubat L, Gravemeyer J, Franks J, Gibbs JR, Park HJ, Ezhkova E, Becker JC, Shuda M. Conversion of Sox2-dependent Merkel cell carcinoma to a differentiated neuron-like phenotype by T antigen inhibition. Proc Natl Acad Sci U S A. 2019 Oct 1;116(40):20104-20114. doi: 10.1073/pnas.1907154116. PubMed PMID: 31527246; PMCID: PMC6778204.
Rossi ED, Pantanowitz L, Faquin WC. The Role of Molecular Testing for the Indeterminate Thyroid FNA. Genes (Basel). 2019 Sep 23;10(10): doi: 10.3390/genes10100736. PubMed PMID: 31547603; PMCID: PMC6826845.
Rossi ED, Pantanowitz L. ICC 2019 in Sydney: Considerations for pediatric cytology classifications. Cancer Cytopathol. 2019 Oct;127(10):621. doi: 10.1002/cncy.22179. PubMed PMID: 31553526.
Rossi ED, Papotti M, Faquin W, Larocca LM, Pantanowitz L. The Diagnosis of Hyalinizing Trabecular Tumor: A Difficult and Controversial Thyroid Entity. Head Neck Pathol. 2020 Sep;14(3):778-784. doi: 10.1007/s12105-019-01083-5. PubMed PMID: 31571046; PMCID: PMC7413943.
Koehler M, Aravamudhan P, Guzman-Cardozo C, Dumitru AC, Yang J, Gargiulo S, Soumillion P, Dermody TS, Alsteens D. Glycan-mediated enhancement of reovirus receptor binding. Nat Commun. 2019 Oct 1;10(1):4460. doi: 10.1038/s41467-019-12411-2. PubMed PMID: 31575869; PMCID: PMC6773860.
Huet A, Duda RL, Boulanger P, Conway JF. Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy. Proc Natl Acad Sci U S A. 2019 Oct 15;116(42):21037-21046. doi: 10.1073/pnas.1909645116. PubMed PMID: 31578255; PMCID: PMC6800373.
Fetters AM, Cantalupo PG, Ashman TL, Pipas JM. Coding-Complete Genome Sequence of a Pollen-Associated Virus Belonging to the Secoviridae Family Recovered from a Japanese Apricot (Prunus mume) Metagenome Data Set. Microbiol Resour Announc. 2019 Oct 3;8(40): doi: 10.1128/MRA.00881-19. PubMed PMID: 31582454; PMCID: PMC6776771.
Bissel SJ, Carter CE, Wang G, Johnson SK, Lashua LP, Kelvin AA, Wiley CA, Ghedin E, Ross TM. Age-Related Pathology Associated with H1N1 A/California/07/2009 Influenza Virus Infection. Am J Pathol. 2019 Dec;189(12):2389-2399. doi: 10.1016/j.ajpath.2019.08.017. PubMed PMID: 31585069; PMCID: PMC6893900.
Girolami I, Pantanowitz L, Marletta S, Brunelli M, Mescoli C, Parisi A, Barresi V, Parwani A, Neil D, Scarpa A, Rossi ED, Eccher A. Diagnostic concordance between whole slide imaging and conventional light microscopy in cytopathology: A systematic review. Cancer Cytopathol. 2020 Jan;128(1):17-28. doi: 10.1002/cncy.22195. PubMed PMID: 31600035.
Choudry HA, Bartlett DL. ASO Author Reflections: Controversies and Confusion in Terminology and Grading of Primary Appendiceal Mucinous Neoplasms. Ann Surg Oncol. 2019 Dec;26(Suppl 3):776-777. doi: 10.1245/s10434-019-07937-0. PubMed PMID: 31605329.
Schlueter N, Amaechi BT, Bartlett D, Buzalaf MAR, Carvalho TS, Ganss C, Hara AT, Huysmans MDNJM, Lussi A, Moazzez R, Vieira AR, West NX, Wiegand A, Young A, Lippert F. Terminology of Erosive Tooth Wear: Consensus Report of a Workshop Organized by the ORCA and the Cariology Research Group of the IADR. Caries Res. 2020;54(1):2-6. doi: 10.1159/000503308. PubMed PMID: 31610535.
Shi Z, Zou J, Zhang Z, Zhao X, Noriega J, Zhang B, Zhao C, Ingle H, Bittinger K, Mattei LM, Pruijssers AJ, Plemper RK, Nice TJ, Baldridge MT, Dermody TS, Chassaing B, Gewirtz AT. Segmented Filamentous Bacteria Prevent and Cure Rotavirus Infection. Cell. 2019 Oct 17;179(3):644-658.e13. doi: 10.1016/j.cell.2019.09.028. PubMed PMID: 31607511; PMCID: PMC7525827.
Golani-Zaidie L, Borodianskiy-Shteinberg T, Bisht P, Das B, Kinchington PR, Goldstein RS. Bioinformatically-predicted varicella zoster virus small non-coding RNAs are expressed in lytically-infected epithelial cells and neurons. Virus Res. 2019 Dec;274197773. doi: 10.1016/j.virusres.2019.197773. PubMed PMID: 31614167; PMCID: PMC6911696.
Dietz RL, Hartman DJ, Pantanowitz L. Systematic Review of the Use of Telepathology During Intraoperative Consultation. Am J Clin Pathol. 2020 Jan 2;153(2):198-209. doi: 10.1093/ajcp/aqz155. PubMed PMID: 31618416; PMCID: PMC7317083.
Goins WF, Huang S, Hall B, Marzulli M, Cohen JB, Glorioso JC. Engineering HSV-1 Vectors for Gene Therapy. Methods Mol Biol. 2020;206073-90. doi: 10.1007/978-1-4939-9814-2_4. PubMed PMID: 31617173.
Macatangay BJC, Gandhi RT, Jones RB, Mcmahon DK, Lalama CM, Bosch RJ, Cyktor JC, Thomas AS, Borowski L, Riddler SA, Hogg E, Stevenson E, Eron JJ, Mellors JW, Rinaldo CR, ACTG A5321 Team.. T cells with high PD-1 expression are associated with lower HIV-specific immune responses despite long-term antiretroviral therapy. AIDS. 2020 Jan 1;34(1):15-24. doi: 10.1097/QAD.0000000000002406. PubMed PMID: 31634201; PMCID: PMC7313719.
Musick A, Spindler J, Boritz E, Pérez L, Crespo-Vélez D, Patro SC, Sobolewski MD, Bale MJ, Reid C, Keele BF, Capoferri A, Shao W, Wiegand A, Simonetti FR, Mellors JW, Hughes SH, Coffin JM, Maldarelli F, Kearney MF. HIV Infected T Cells Can Proliferate in vivo Without Inducing Expression of the Integrated Provirus. Front Microbiol. 2019;102204. doi: 10.3389/fmicb.2019.02204. PubMed PMID: 31632364; PMCID: PMC6781911.
Wang F, Liu Y, Su Z, Osinski T, de Oliveira GAP, Conway JF, Schouten S, Krupovic M, Prangishvili D, Egelman EH. A packing for A-form DNA in an icosahedral virus. Proc Natl Acad Sci U S A. 2019 Nov 5;116(45):22591-22597. doi: 10.1073/pnas.1908242116. PubMed PMID: 31636205; PMCID: PMC6842630.
Dremel SE, DeLuca NA. Herpes simplex viral nucleoprotein creates a competitive transcriptional environment facilitating robust viral transcription and host shut off. Elife. 2019 Oct 22;8 doi: 10.7554/eLife.51109. PubMed PMID: 31638576; PMCID: PMC6805162.
Gronenborn AM. Integrated multidisciplinarity in the natural sciences. J Biol Chem. 2019 Nov 29;294(48):18162-18167. doi: 10.1074/jbc.AW119.008142. PubMed PMID: 31636121; PMCID: PMC6885623.
Choudry MH, Bartlett DL, Alexander HR, Turaga KK. Defining and Refining the Role for Surgery and Intraperitoneal Chemotherapy in the Treatment of Peritoneal Surface Malignancies. Ann Surg Oncol. 2020 Jan;27(1):73-75. doi: 10.1245/s10434-019-07956-x. PubMed PMID: 31646448.
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Fritz M, Kraus J, Quinn CM, Yap GPA, Struppe J, Sergeyev IV, Gronenborn AM, Polenova T. Measurement of Accurate Interfluorine Distances in Crystalline Organic Solids: A High-Frequency Magic Angle Spinning NMR Approach. J Phys Chem B. 2019 Dec 19;123(50):10680-10690. doi: 10.1021/acs.jpcb.9b08919. PubMed PMID: 31682453; PMCID: PMC7313266.
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Eccher A, Girolami I, D'Errico A, Zaza G, Carraro A, Montin U, Boggi U, Scarpa A, Brunelli M, Martignoni G, Segev D, Rossi ED, Pantanowitz L. Management of Thyroid Nodules in Deceased Donors With Comparison Between Fine Needle Aspiration and Intraoperative Frozen Section in the Setting of Transplantation. Prog Transplant. 2019 Dec;29(4):316-320. doi: 10.1177/1526924819873898. PubMed PMID: 31711391.
Moaven O, Votanopoulos KI, Shen P, Mansfield P, Bartlett DL, Russell G, McQuellon R, Stewart JH, Levine EA. Health-Related Quality of Life After Cytoreductive Surgery/HIPEC for Mucinous Appendiceal Cancer: Results of a Multicenter Randomized Trial Comparing Oxaliplatin and Mitomycin. Ann Surg Oncol. 2020 Mar;27(3):772-780. doi: 10.1245/s10434-019-08064-6. PubMed PMID: 31720933; PMCID: PMC7034653.
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Katusiime MG, Halvas EK, Wright I, Joseph K, Bale MJ, Kirby-McCullough B, Engelbrecht S, Shao W, Hu WS, Cotton MF, Mellors JW, Kearney MF, van Zyl GU. Intact HIV Proviruses Persist in Children Seven to Nine Years after Initiation of Antiretroviral Therapy in the First Year of Life. J Virol. 2020 Jan 31;94(4): doi: 10.1128/JVI.01519-19. PubMed PMID: 31776265; PMCID: PMC6997763.
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Monaco SE, Han M, Dietz R, Xing J, Cuda J, Pantanowitz L. Assessing competency for remote telecytology rapid on-site evaluation using pre-recorded dynamic video streaming. Cytopathology. 2020 Sep;31(5):411-418. doi: 10.1111/cyt.12794. PubMed PMID: 31808209.
Pantanowitz L, Pantanowitz J, Escalante EP, Krotish D. Volunteering at CerviCusco in Peru. Cancer Cytopathol. 2020 Mar;128(3):155-157. doi: 10.1002/cncy.22212. PubMed PMID: 31816158.
Dell'Aquila M, Granitto A, Martini M, Capodimonti S, Cocomazzi A, Musarra T, Fiorentino V, Pontecorvi A, Lombardi CP, Fadda G, Pantanowitz L, Larocca LM, Rossi ED. PD-L1 and thyroid cytology: A possible diagnostic and prognostic marker. Cancer Cytopathol. 2020 Mar;128(3):177-189. doi: 10.1002/cncy.22224. PubMed PMID: 31821747.
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Zureikat AH, Beane JD, Zenati MS, Al Abbas AI, Boone BA, Moser AJ, Bartlett DL, Hogg ME, Zeh HJ 3rd. 500 Minimally Invasive Robotic Pancreatoduodenectomies: One Decade of Optimizing Performance. Ann Surg. 2021 May 1;273(5):966-972. doi: 10.1097/SLA.0000000000003550. PubMed PMID: 31851003; PMCID: PMC7871451.
Kaltenmeier C, Shen C, Medich DS, Geller DA, Bartlett DL, Tsung A, Tohme S. Time to Surgery and Colon Cancer Survival in the United States. Ann Surg. 2021 Dec 1;274(6):1025-1031. doi: 10.1097/SLA.0000000000003745. PubMed PMID: 31850985.
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Akkina R, Barber DL, Bility MT, Bissig KD, Burwitz BJ, Eichelberg K, Endsley JJ, Garcia JV, Hafner R, Karakousis PC, Korba BE, Koshy R, Lambros C, Menne S, Nuermberger EL, Ploss A, Podell BK, Poluektova LY, Sanders-Beer BE, Subbian S, Wahl A. Small Animal Models for Human Immunodeficiency Virus (HIV), Hepatitis B, and Tuberculosis: Proceedings of an NIAID Workshop. Curr HIV Res. 2020;18(1):19-28. doi: 10.2174/1570162X18666191223114019. PubMed PMID: 31870268; PMCID: PMC7403688.
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Monaco SE, Pantanowitz L, Xing J, Cuda J, Kammula US. Cytologic Evaluation of Tumor-Infiltrating Lymphocytes for Adoptive Cell Therapy. Am J Clin Pathol. 2020 Mar 9;153(4):513-523. doi: 10.1093/ajcp/aqz195. PubMed PMID: 31895425.
Ju E, Li T, Liu Z, da Silva SR, Wei S, Zhang X, Wang X, Gao SJ. Specific Inhibition of Viral MicroRNAs by Carbon Dots-Mediated Delivery of Locked Nucleic Acids for Therapy of Virus-Induced Cancer. ACS Nano. 2020 Jan 28;14(1):476-487. doi: 10.1021/acsnano.9b06333. PubMed PMID: 31895530; PMCID: PMC7119180.
Kristoff J, Rinaldo CR, Mailliard RB. Role of Dendritic Cells in Exposing Latent HIV-1 for the Kill. Viruses. 2019 Dec 28;12(1): doi: 10.3390/v12010037. PubMed PMID: 31905690; PMCID: PMC7019604.
Castanha PMS, Erdos G, Watkins SC, Falo LD Jr, Marques ETA, Barratt-Boyes SM. Reciprocal immune enhancement of dengue and Zika virus infection in human skin. JCI Insight. 2020 Feb 13;5(3): doi: 10.1172/jci.insight.133653. PubMed PMID: 31910161; PMCID: PMC7098780.
Abere B, Li J, Zhou H, Toptan T, Moore PS, Chang Y. Kaposi's Sarcoma-Associated Herpesvirus-Encoded circRNAs Are Expressed in Infected Tumor Tissues and Are Incorporated into Virions. mBio. 2020 Jan 7;11(1): doi: 10.1128/mBio.03027-19. PubMed PMID: 31911496; PMCID: PMC6946807.
Carrasco C, Pastrana CL, Aicart-Ramos C, Leuba SH, Khan SA, Moreno-Herrero F. Dynamics of DNA nicking and unwinding by the RepC-PcrA complex. Nucleic Acids Res. 2020 Feb 28;48(4):2013-2025. doi: 10.1093/nar/gkz1200. PubMed PMID: 31930301; PMCID: PMC7038956.
Gruffaz M, Zhang T, Marshall V, Gonçalves P, Ramaswami R, Labo N, Whitby D, Uldrick TS, Yarchoan R, Huang Y, Gao SJ. Signatures of oral microbiome in HIV-infected individuals with oral Kaposi's sarcoma and cell-associated KSHV DNA. PLoS Pathog. 2020 Jan;16(1):e1008114. doi: 10.1371/journal.ppat.1008114. PubMed PMID: 31951641; PMCID: PMC6992226.
Hassan A, Quinn CM, Struppe J, Sergeyev IV, Zhang C, Guo C, Runge B, Theint T, Dao HH, Jaroniec CP, Berbon M, Lends A, Habenstein B, Loquet A, Kuemmerle R, Perrone B, Gronenborn AM, Polenova T. Sensitivity boosts by the CPMAS CryoProbe for challenging biological assemblies. J Magn Reson. 2020 Feb;311106680. doi: 10.1016/j.jmr.2019.106680. PubMed PMID: 31951864; PMCID: PMC7060763.
Dilly A, Honick BD, Lee YJ, Bartlett DL, Choudry HA. Rational application of targeted therapeutics in mucinous colon/appendix cancers with positive predictive factors. Cancer Med. 2020 Mar;9(5):1753-1767. doi: 10.1002/cam4.2847. PubMed PMID: 31958897; PMCID: PMC7050077.
Satturwar S, Monaco SE, Xing J, Pantanowitz L. The utility of cell blocks for international cytopathology teleconsultation by whole slide imaging. Cytopathology. 2020 Sep;31(5):419-425. doi: 10.1111/cyt.12800. PubMed PMID: 31961454.
Luo GG, Gao SJ. Global health concerns stirred by emerging viral infections. J Med Virol. 2020 Apr;92(4):399-400. doi: 10.1002/jmv.25683. PubMed PMID: 31967329; PMCID: PMC7166855.
Melody K, Roy CN, Kline C, Cottrell ML, Evans D, Shutt K, Pennings PS, Keele BF, Bility M, Kashuba ADM, Ambrose Z. Long-Acting Rilpivirine (RPV) Preexposure Prophylaxis Does Not Inhibit Vaginal Transmission of RPV-Resistant HIV-1 or Select for High-Frequency Drug Resistance in Humanized Mice. J Virol. 2020 Mar 31;94(8): doi: 10.1128/JVI.01912-19. PubMed PMID: 31969438; PMCID: PMC7108851.
Choudry HA, Bartlett DL. Deciphering the Molecular Landscape of Appendiceal Mucinous Neoplasms for Diagnostic, Prognostic and Therapeutic Purposes. Ann Surg Oncol. 2020 May;27(5):1312-1313. doi: 10.1245/s10434-020-08211-4. PubMed PMID: 31974714.
Wiley CA. Neuropathology on Trial. J Neuropathol Exp Neurol. 2019 Dec 14; doi: 10.1093/jnen/nlz137. PubMed PMID: 31977018.
Lee YS, Kalimuthu K, Seok Park Y, Makala H, Watkins SC, Choudry MHA, Bartlett DL, Tae Kwon Y, Lee YJ. Ferroptotic agent-induced endoplasmic reticulum stress response plays a pivotal role in the autophagic process outcome. J Cell Physiol. 2020 Oct;235(10):6767-6778. doi: 10.1002/jcp.29571. PubMed PMID: 31985039; PMCID: PMC7382974.
Upadhyay Baskota S, Monaco SE, Xing J, Pantanowitz L. Peritheliomatous pattern: A diagnostic clue for diagnosing metastatic melanoma in cytology. Cancer Cytopathol. 2020 Apr;128(4):260-268. doi: 10.1002/cncy.22241. PubMed PMID: 31985897.
Xing J, Monaco SE, Cuda J, Pantanowitz L. Telecytology rapid on-site evaluation: Diagnostic challenges, technical issues and lessons learned. Cytopathology. 2020 Sep;31(5):402-410. doi: 10.1111/cyt.12801. PubMed PMID: 31984572.
Tang B, Guo ZS, Bartlett DL, Yan DZ, Schane CP, Thomas DL, Liu J, McFadden G, Shisler JL, Roy EJ. Synergistic Combination of Oncolytic Virotherapy and Immunotherapy for Glioma. Clin Cancer Res. 2020 May 1;26(9):2216-2230. doi: 10.1158/1078-0432.CCR-18-3626. PubMed PMID: 32019860; PMCID: PMC7723446.
Maleki Z, Muller S, Layfield L, Siddiqui MT, Rekhtman N, Pantanowitz L. Pulmonary sclerosing pneumocytoma: Cytomorphology and immunoprofile. Cancer Cytopathol. 2020 Jun;128(6):414-423. doi: 10.1002/cncy.22251. PubMed PMID: 32022435.
Ke X, Qin Q, Deng T, Liao Y, Gao SJ. Heterogeneous Responses of Gastric Cancer Cell Lines to Tenovin-6 and Synergistic Effect with Chloroquine. Cancers (Basel). 2020 Feb 5;12(2): doi: 10.3390/cancers12020365. PubMed PMID: 32033497; PMCID: PMC7072542.
Phillips AN, Bansi-Matharu L, Venter F, Havlir D, Pozniak A, Kuritzkes DR, Wensing A, Lundgren JD, Pillay D, Mellors J, Cambiano V, Jahn A, Apollo T, Mugurungi O, Ripin D, Da Silva J, Raizes E, Ford N, Siberry GK, Gupta RK, Barnabas R, Revill P, Cohn J, Calmy A, Bertagnolio S. Updated assessment of risks and benefits of dolutegravir versus efavirenz in new antiretroviral treatment initiators in sub-Saharan Africa: modelling to inform treatment guidelines. Lancet HIV. 2020 Mar;7(3):e193-e200. doi: 10.1016/S2352-3018(19)30400-X. PubMed PMID: 32035041; PMCID: PMC7167509.
Tuzmen C, Cairns TM, Atanasiu D, Lou H, Saw WT, Hall BL, Cohen JB, Cohen GH, Glorioso JC. Point Mutations in Retargeted gD Eliminate the Sensitivity of EGFR/EGFRvIII-Targeted HSV to Key Neutralizing Antibodies. Mol Ther Methods Clin Dev. 2020 Mar 13;16145-154. doi: 10.1016/j.omtm.2019.12.013. PubMed PMID: 32042851; PMCID: PMC7000558.
Martínez-Girón R, Pantanowitz L. Crystalloid structures in lung fine needle aspiration cytology. Cytopathology. 2020 May;31(3):248-249. doi: 10.1111/cyt.12809. PubMed PMID: 32053741.
Xiao C, Li X, Liu S, Sang Y, Gao SJ, Gao F. HIV-1 did not contribute to the 2019-nCoV genome. Emerg Microbes Infect. 2020;9(1):378-381. doi: 10.1080/22221751.2020.1727299. PubMed PMID: 32056509; PMCID: PMC7033698.
Alvarez Orellana J, Kwun HJ, Artusi S, Chang Y, Moore PS. Sirolimus and Other Mechanistic Target of Rapamycin Inhibitors Directly Activate Latent Pathogenic Human Polyomavirus Replication. J Infect Dis. 2021 Oct 13;224(7):1160-1169. doi: 10.1093/infdis/jiaa071. PubMed PMID: 32060513; PMCID: PMC8514189.
Monaco SE, Dacic S, Seigh L, Hartman DJ, Xing J, Pantanowitz L. Quantitative image analysis for CD8 score in lung small biopsies and cytology cell-blocks. Cytopathology. 2020 Sep;31(5):393-401. doi: 10.1111/cyt.12812. PubMed PMID: 32065467; PMCID: PMC7429339.
McCormick KD, Penrose KJ, Brumme CJ, Harrigan PR, Viana RV, Mellors JW, Parikh UM, Wallis CL. Discordance between Etravirine Phenotype and Genotype-Based Predicted Phenotype for Subtype C HIV-1 from First-Line Antiretroviral Therapy Failures in South Africa. Antimicrob Agents Chemother. 2020 Apr 21;64(5): doi: 10.1128/AAC.02101-19. PubMed PMID: 32071061; PMCID: PMC7179637.
Kim AS, Zimmerman O, Fox JM, Nelson CA, Basore K, Zhang R, Durnell L, Desai C, Bullock C, Deem SL, Oppenheimer J, Shapiro B, Wang T, Cherry S, Coyne CB, Handley SA, Landis MJ, Fremont DH, Diamond MS. An Evolutionary Insertion in the Mxra8 Receptor-Binding Site Confers Resistance to Alphavirus Infection and Pathogenesis. Cell Host Microbe. 2020 Mar 11;27(3):428-440.e9. doi: 10.1016/j.chom.2020.01.008. PubMed PMID: 32075743; PMCID: PMC7163869.
Evans AS, Lennemann NJ, Coyne CB. BPIFB3 Regulates Endoplasmic Reticulum Morphology To Facilitate Flavivirus Replication. J Virol. 2020 Apr 16;94(9): doi: 10.1128/JVI.00029-20. PubMed PMID: 32102874; PMCID: PMC7163128.
Aravamudhan P, Raghunathan K, Konopka-Anstadt J, Pathak A, Sutherland DM, Carter BD, Dermody TS. Reovirus uses macropinocytosis-mediated entry and fast axonal transport to infect neurons. PLoS Pathog. 2020 Feb;16(2):e1008380. doi: 10.1371/journal.ppat.1008380. PubMed PMID: 32109948; PMCID: PMC7065821.
McSharry BP, Samer C, McWilliam HEG, Ashley CL, Yee MB, Steain M, Liu L, Fairlie DP, Kinchington PR, McCluskey J, Abendroth A, Villadangos JA, Rossjohn J, Slobedman B. Virus-Mediated Suppression of the Antigen Presentation Molecule MR1. Cell Rep. 2020 Mar 3;30(9):2948-2962.e4. doi: 10.1016/j.celrep.2020.02.017. PubMed PMID: 32130899; PMCID: PMC7798347.
Otani Y, Yoo JY, Chao S, Liu J, Jaime-Ramirez AC, Lee TJ, Hurwitz B, Yan Y, Dai H, Glorioso JC, Caligiuri MA, Yu J, Kaur B. Oncolytic HSV-Infected Glioma Cells Activate NOTCH in Adjacent Tumor Cells Sensitizing Tumors to Gamma Secretase Inhibition. Clin Cancer Res. 2020 May 15;26(10):2381-2392. doi: 10.1158/1078-0432.CCR-19-3420. PubMed PMID: 32139403; PMCID: PMC7325527.
Shomer NH, Allen-Worthington KH, Hickman DL, Jonnalagadda M, Newsome JT, Slate AR, Valentine H, Williams AM, Wilkinson M. Review of Rodent Euthanasia Methods. J Am Assoc Lab Anim Sci. 2020 May 1;59(3):242-253. doi: 10.30802/AALAS-JAALAS-19-000084. PubMed PMID: 32138808; PMCID: PMC7210730.
Li WF, Aryal M, Shu ST, Smithgall TE. HIV-1 Nef dimers short-circuit immune receptor signaling by activating Tec-family kinases at the host cell membrane. J Biol Chem. 2020 Apr 10;295(15):5163-5174. doi: 10.1074/jbc.RA120.012536. PubMed PMID: 32144207; PMCID: PMC7152769.
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Zeh HJ, Bahary N, Boone BA, Singhi AD, Miller-Ocuin JL, Normolle DP, Zureikat AH, Hogg ME, Bartlett DL, Lee KK, Tsung A, Marsh JW, Murthy P, Tang D, Seiser N, Amaravadi RK, Espina V, Liotta L, Lotze MT. A Randomized Phase II Preoperative Study of Autophagy Inhibition with High-Dose Hydroxychloroquine and Gemcitabine/Nab-Paclitaxel in Pancreatic Cancer Patients. Clin Cancer Res. 2020 Jul 1;26(13):3126-3134. doi: 10.1158/1078-0432.CCR-19-4042. PubMed PMID: 32156749; PMCID: PMC8086597.
Rocco JM, York Z, Shen C, Shiboski C, Cyriaque-Webster J, McLaughlin J, Borowski L, Chen H, Aberg JA, Dittmer DP, Ghannoum M, Rinaldo CR, Macatangay B. Oral Cytokine Levels Are More Linked to Levels of Plasma and Oral HIV-1 RNA Than to CD4+ T-Cell Counts in People With HIV. Open Forum Infect Dis. 2020 Mar;7(3):ofaa047. doi: 10.1093/ofid/ofaa047. PubMed PMID: 32158775; PMCID: PMC7051037.
Satturwar S, Monaco SE, Xing J, Brand RE, Pantanowitz L. Bizarre benign cells in peri-rectal endoscopic ultrasound-guided fine-needle aspiration due to seminal vesicle sampling. Diagn Cytopathol. 2020 Jun;48(6):586-588. doi: 10.1002/dc.24415. PubMed PMID: 32191821.
Huang Q, Zhou B, Cai D, Zong Y, Wu Y, Liu S, Mercier A, Guo H, Hou J, Colonno R, Sun J. Rapid Turnover of Hepatitis B Virus Covalently Closed Circular DNA Indicated by Monitoring Emergence and Reversion of Signature-Mutation in Treated Chronic Hepatitis B Patients. Hepatology. 2021 Jan;73(1):41-52. doi: 10.1002/hep.31240. PubMed PMID: 32189364; PMCID: PMC7898704.
Kalra S, Tizhoosh HR, Shah S, Choi C, Damaskinos S, Safarpoor A, Shafiei S, Babaie M, Diamandis P, Campbell CJV, Pantanowitz L. Pan-cancer diagnostic consensus through searching archival histopathology images using artificial intelligence. NPJ Digit Med. 2020;331. doi: 10.1038/s41746-020-0238-2. PubMed PMID: 32195366; PMCID: PMC7064517.
Trejo Bittar HE, Jerome JA, Hartman D, Pantanowitz L, Mehrad M, Dacic S. Prognostic significance of microscopic size in peripherally located scar-associated clinical stage I lung carcinomas. Lung Cancer. 2020 May;14312-18. doi: 10.1016/j.lungcan.2020.03.004. PubMed PMID: 32200136.
Hartman DJ, Frank M, Seigh L, Choudry H, Pingpank J, Holtzman M, Bartlett D, Bahary N, Pantanowitz L, Pai RK. Automated Quantitation of CD8-positive T Cells Predicts Prognosis in Colonic Adenocarcinoma With Mucinous, Signet Ring Cell, or Medullary Differentiation Independent of Mismatch Repair Protein Status. Am J Surg Pathol. 2020 Jul;44(7):991-1001. doi: 10.1097/PAS.0000000000001468. PubMed PMID: 32205483; PMCID: PMC7364820.
Ge Y, Wang H, Ren J, Liu W, Chen L, Chen H, Ye J, Dai E, Ma C, Ju S, Guo ZS, Liu Z, Bartlett DL. Oncolytic vaccinia virus delivering tethered IL-12 enhances antitumor effects with improved safety. J Immunother Cancer. 2020 Mar;8(1): doi: 10.1136/jitc-2020-000710. PubMed PMID: 32209602; PMCID: PMC7103801.
Choi UY, Lee JJ, Park A, Zhu W, Lee HR, Choi YJ, Yoo JS, Yu C, Feng P, Gao SJ, Chen S, Eoh H, Jung JU. Oncogenic human herpesvirus hijacks proline metabolism for tumorigenesis. Proc Natl Acad Sci U S A. 2020 Apr 7;117(14):8083-8093. doi: 10.1073/pnas.1918607117. PubMed PMID: 32213586; PMCID: PMC7149499.
Paniccia A, Gleisner AL, Zenati MS, Al Abbas AI, Jung JP, Bahary N, Lee KKW, Bartlett D, Hogg ME, Zeh HJ, Zureikat AH. Predictors of Disease Progression or Performance Status Decline in Patients Undergoing Neoadjuvant Therapy for Localized Pancreatic Head Adenocarcinoma. Ann Surg Oncol. 2020 Aug;27(8):2961-2971. doi: 10.1245/s10434-020-08257-4. PubMed PMID: 32222859.
Gonzalez D, Dietz RL, Pantanowitz L. Feasibility of a deep learning algorithm to distinguish large cell neuroendocrine from small cell lung carcinoma in cytology specimens. Cytopathology. 2020 Sep;31(5):426-431. doi: 10.1111/cyt.12829. PubMed PMID: 32246504.
Girolami I, Marletta S, Pantanowitz L, Torresani E, Ghimenton C, Barbareschi M, Scarpa A, Brunelli M, Barresi V, Trimboli P, Eccher A. Impact of image analysis and artificial intelligence in thyroid pathology, with particular reference to cytological aspects. Cytopathology. 2020 Sep;31(5):432-444. doi: 10.1111/cyt.12828. PubMed PMID: 32248583.
Kim E, Erdos G, Huang S, Kenniston TW, Balmert SC, Carey CD, Raj VS, Epperly MW, Klimstra WB, Haagmans BL, Korkmaz E, Falo LD Jr, Gambotto A. Microneedle array delivered recombinant coronavirus vaccines: Immunogenicity and rapid translational development. EBioMedicine. 2020 May;55102743. doi: 10.1016/j.ebiom.2020.102743. PubMed PMID: 32249203; PMCID: PMC7128973.
Rossi ED, Pantanowitz L. International perspectives: Impact of the COVID-19 pandemic on cytology. Cancer Cytopathol. 2020 May;128(5):307-308. doi: 10.1002/cncy.22275. PubMed PMID: 32259387; PMCID: PMC7262335.
Bartlett DL, Howe JR, Chang G, Crago A, Hogg M, Karakousis G, Levine E, Maker A, Mamounas E, McGuire K, Merchant N, Shibata D, Sohn V, Solorzano C, Turaga K, White R, Yang A, Yoon S, Society of Surgical Oncology.. Management of Cancer Surgery Cases During the COVID-19 Pandemic: Considerations. Ann Surg Oncol. 2020 Jun;27(6):1717-1720. doi: 10.1245/s10434-020-08461-2. PubMed PMID: 32270420; PMCID: PMC7141488.
Agarwal Y, Beatty C, Biradar S, Castronova I, Ho S, Melody K, Bility MT. Moving beyond the mousetrap: current and emerging humanized mouse and rat models for investigating prevention and cure strategies against HIV infection and associated pathologies. Retrovirology. 2020 Apr 10;17(1):8. doi: 10.1186/s12977-020-00515-3. PubMed PMID: 32276640; PMCID: PMC7149862.
Bisht P, Das B, Kinchington PR, Goldstein RS. Varicella-Zoster Virus (VZV) Small Noncoding RNAs Antisense to the VZV Latency-Encoded Transcript VLT Enhance Viral Replication. J Virol. 2020 Jun 16;94(13): doi: 10.1128/JVI.00123-20. PubMed PMID: 32295909; PMCID: PMC7307171.
Balasubramani GK, Nowalk MP, Sax TM, Suyama J, Bobyock E, Rinaldo CR Jr, Martin ET, Monto AS, Jackson ML, Gaglani MJ, Flannery B, Chung JR, Zimmerman RK. Influenza vaccine effectiveness among outpatients in the US Influenza Vaccine Effectiveness Network by study site 2011-2016. Influenza Other Respir Viruses. 2020 Jul;14(4):380-390. doi: 10.1111/irv.12741. PubMed PMID: 32298048; PMCID: PMC7298285.
Kuroda S, Miyagawa Y, Sato Y, Yamamoto M, Adachi K, Kinoh H, Goins WF, Cohen JB, Glorioso JC, Taniai N, Yoshida H, Okada T. Protocol Optimization for the Production of the Non-Cytotoxic JΔNI5 HSV Vector Deficient in Expression of Immediately Early Genes. Mol Ther Methods Clin Dev. 2020 Jun 12;17612-621. doi: 10.1016/j.omtm.2020.03.014. PubMed PMID: 32300608; PMCID: PMC7150431.
Sutherland DM, Taylor GM, Dermody TS. Coping with COVID: How a Research Team Learned To Stay Engaged in This Time of Physical Distancing. mBio. 2020 Apr 17;11(2): doi: 10.1128/mBio.00850-20. PubMed PMID: 32303589; PMCID: PMC7167600.
DiMaio D, Enquist LW, Dermody TS. A New Coronavirus Emerges, This Time Causing a Pandemic. Annu Rev Virol. 2020 Sep 29;7(1):iii-v. doi: 10.1146/annurev-vi-07-042020-100001. PubMed PMID: 32315256.
Hartman DJ, Van Der Laak JAWM, Gurcan MN, Pantanowitz L. Value of Public Challenges for the Development of Pathology Deep Learning Algorithms. J Pathol Inform. 2020;117. doi: 10.4103/jpi.jpi_64_19. PubMed PMID: 32318315; PMCID: PMC7147520.
Erdos G, Balmert SC, Carey CD, Falo GD, Patel NA, Zhang J, Gambotto A, Korkmaz E, Falo LD Jr. Improved Cutaneous Genetic Immunization by Microneedle Array Delivery of an Adjuvanted Adenovirus Vaccine. J Invest Dermatol. 2020 Dec;140(12):2528-2531.e2. doi: 10.1016/j.jid.2020.03.966. PubMed PMID: 32330464; PMCID: PMC7172852.
Nassour I, Winters SB, Hoehn R, Tohme S, Adam MA, Bartlett DL, Lee KK, Paniccia A, Zureikat AH. Long-term oncologic outcomes of robotic and open pancreatectomy in a national cohort of pancreatic adenocarcinoma. J Surg Oncol. 2020 Aug;122(2):234-242. doi: 10.1002/jso.25958. PubMed PMID: 32350882.
Xing J, Han M, Monaco SE, Dhir R, Roy S, Pantanowitz L. An institutional experience evaluating hTERT immunostaining in 100 consecutive ThinPrep urine specimens. J Am Soc Cytopathol. 2021 Jan-Feb;10(1):88-93. doi: 10.1016/j.jasc.2020.03.003. PubMed PMID: 32354607.
Henry BA, Kanarek JP, Kotter A, Helm M, Lee N. 5-methylcytosine modification of an Epstein-Barr virus noncoding RNA decreases its stability. RNA. 2020 Aug;26(8):1038-1048. doi: 10.1261/rna.075275.120. PubMed PMID: 32354721; PMCID: PMC7373997.
Fernández de Castro I, Tenorio R, Ortega-González P, Knowlton JJ, Zamora PF, Lee CH, Fernández JJ, Dermody TS, Risco C. A modified lysosomal organelle mediates nonlytic egress of reovirus. J Cell Biol. 2020 Jul 6;219(7): doi: 10.1083/jcb.201910131. PubMed PMID: 32356864; PMCID: PMC7337502.
Kraus J, Gupta R, Lu M, Gronenborn AM, Akke M, Polenova T. Accurate Backbone 13 C and 15 N Chemical Shift Tensors in Galectin-3 Determined by MAS NMR and QM/MM: Details of Structure and Environment Matter. Chemphyschem. 2020 Jul 2;21(13):1436-1443. doi: 10.1002/cphc.202000249. PubMed PMID: 32363727; PMCID: PMC8080305.
Santos PM, Adamik J, Howes TR, Du S, Vujanovic L, Warren S, Gambotto A, Kirkwood JM, Butterfield LH. Impact of checkpoint blockade on cancer vaccine-activated CD8+ T cell responses. J Exp Med. 2020 Jul 6;217(7): doi: 10.1084/jem.20191369. PubMed PMID: 32369107; PMCID: PMC7336310.
Howe JR, Bartlett DL, Tyler DS, Wong SL, Hunt KK, DeMatteo RP, Society of Surgical Oncology.. COVID-19 Guideline Modifications as CMS Announces "Opening Up America Again": Comments from the Society of Surgical Oncology. Ann Surg Oncol. 2020 Jul;27(7):2111-2113. doi: 10.1245/s10434-020-08565-9. PubMed PMID: 32378088; PMCID: PMC7202680.
Favazza LA, Parseghian CM, Kaya C, Nikiforova MN, Roy S, Wald AI, Landau MS, Proksell SS, Dueker JM, Johnston ER, Brand RE, Bahary N, Gorantla VC, Rhee JC, Pingpank JF, Choudry HA, Lee K, Paniccia A, Ongchin MC, Zureikat AH, Bartlett DL, Singhi AD. KRAS amplification in metastatic colon cancer is associated with a history of inflammatory bowel disease and may confer resistance to anti-EGFR therapy. Mod Pathol. 2020 Sep;33(9):1832-1843. doi: 10.1038/s41379-020-0560-x. PubMed PMID: 32376853; PMCID: PMC7483889.
Li W, Wang Q, Qi X, Guo Y, Lu H, Chen Y, Lu Z, Yan Q, Zhu X, Jung JU, Tosato G, Gao SJ, Lu C. Viral interleukin-6 encoded by an oncogenic virus promotes angiogenesis and cellular transformation by enhancing STAT3-mediated epigenetic silencing of caveolin 1. Oncogene. 2020 Jun;39(23):4603-4618. doi: 10.1038/s41388-020-1317-1. PubMed PMID: 32393833; PMCID: PMC7970339.
Satturwar SP, Pantanowitz JL, Manko CD, Seigh L, Monaco SE, Pantanowitz L. Ki-67 proliferation index in neuroendocrine tumors: Can augmented reality microscopy with image analysis improve scoring? Cancer Cytopathol. 2020 Aug;128(8):535-544. doi: 10.1002/cncy.22272. PubMed PMID: 32401429.
Liu W, Dai E, Liu Z, Ma C, Guo ZS, Bartlett DL. In Situ Therapeutic Cancer Vaccination with an Oncolytic Virus Expressing Membrane-Tethered IL-2. Mol Ther Oncolytics. 2020 Jun 26;17350-360. doi: 10.1016/j.omto.2020.04.006. PubMed PMID: 32405533; PMCID: PMC7210382.
Wong ZS, Borrelli SLS, Coyne CC, Boyle JP. Cell type- and species-specific host responses to Toxoplasma gondii and its near relatives. Int J Parasitol. 2020 May;50(5):423-431. doi: 10.1016/j.ijpara.2020.05.001. PubMed PMID: 32407716; PMCID: PMC8281328.
Satturwar S, Rekhtman N, Lin O, Pantanowitz L. An update on touch preparations of small biopsies. J Am Soc Cytopathol. 2020 Sep - Oct;9(5):322-331. doi: 10.1016/j.jasc.2020.04.004. PubMed PMID: 32417160; PMCID: PMC8375623.
Martínez-Girón R, Pantanowitz L, Martínez-Torre C. Plant material (aeriferous parenchyma and sclereid cells) mimicking mucormycosis in sputum cytology. Diagn Cytopathol. 2020 Dec;48(12):1309-1312. doi: 10.1002/dc.24474. PubMed PMID: 32445261.
Robles MTS, Cantalupo PG, Duray AM, Freeland M, Murkowski M, van Bokhoven A, Stephens-Shields AJ, Pipas JM, Imperiale MJ. Analysis of viruses present in urine from patients with interstitial cystitis. Virus Genes. 2020 Aug;56(4):430-438. doi: 10.1007/s11262-020-01767-z. PubMed PMID: 32447589; PMCID: PMC7339973.
Xia Y, Guo H. Hepatitis B virus cccDNA: Formation, regulation and therapeutic potential. Antiviral Res. 2020 Aug;180104824. doi: 10.1016/j.antiviral.2020.104824. PubMed PMID: 32450266; PMCID: PMC7387223.
Sun F, Guo ZS, Gregory AD, Shapiro SD, Xiao G, Qu Z. Dual but not single PD-1 or TIM-3 blockade enhances oncolytic virotherapy in refractory lung cancer. J Immunother Cancer. 2020 May;8(1): doi: 10.1136/jitc-2019-000294. PubMed PMID: 32461344; PMCID: PMC7254155.
Girolami I, Pantanowitz L, Mete O, Brunelli M, Marletta S, Colato C, Trimboli P, Crescenzi A, Bongiovanni M, Barbareschi M, Eccher A. Programmed Death-Ligand 1 (PD-L1) Is a Potential Biomarker of Disease-Free Survival in Papillary Thyroid Carcinoma: a Systematic Review and Meta-Analysis of PD-L1 Immunoexpression in Follicular Epithelial Derived Thyroid Carcinoma. Endocr Pathol. 2020 Sep;31(3):291-300. doi: 10.1007/s12022-020-09630-5. PubMed PMID: 32468210.
Baskota SU, Wiley C, Pantanowitz L. The Next Generation Robotic Microscopy for Intraoperative Teleneuropathology Consultation. J Pathol Inform. 2020;1113. doi: 10.4103/jpi.jpi_2_20. PubMed PMID: 32477619; PMCID: PMC7245340.
Zheng W, Klammer AM, Naciri JN, Yeung J, Demers M, Milosevic J, Kinchington PR, Bloom DC, Nimgaonkar VL, D'Aiuto L. Patterns of Herpes Simplex Virus 1 Infection in Neural Progenitor Cells. J Virol. 2020 Jul 30;94(16): doi: 10.1128/JVI.00994-20. PubMed PMID: 32493817; PMCID: PMC7394888.
Voyten J, Holtzman MP, Pantanowitz L, Dhir R, Beasley HS, Cuda J, Monaco SE. Lessons learned from clinical trial queries on small biopsy collections: importance of rapid on-site evaluation. J Am Soc Cytopathol. 2020 Sep - Oct;9(5):461-468. doi: 10.1016/j.jasc.2020.04.012. PubMed PMID: 32499137.
Martínez-Girón R, Pantanowitz L. "Splendore-Hoeppli" phenomenon. Diagn Cytopathol. 2020 Dec;48(12):1316-1317. doi: 10.1002/dc.24512. PubMed PMID: 32501649.
Bartlett DL. Better Biomarkers for Surgeons Treating Cancer. JAMA Surg. 2020 Jul 1;155(7):580. doi: 10.1001/jamasurg.2020.1134. PubMed PMID: 32520321.
Drummond C, Gebhardt ME, Sáenz Robles MT, Carpi G, Hoyer I, Pastusiak A, Reddy MR, Norris DE, Pipas JM, Jackson EK. Stability and detection of nucleic acid from viruses and hosts in controlled mosquito blood feeds. PLoS One. 2020;15(6):e0231061. doi: 10.1371/journal.pone.0231061. PubMed PMID: 32525960; PMCID: PMC7289426.
AlMasri S, Nassour I, Tohme S, Adam MA, Hoehn RS, Bartlett DL, Lee KK, Zureikat AH, Paniccia A. Long-term survival following minimally invasive extended cholecystectomy for gallbladder cancer: A 7-year experience from the National Cancer Database. J Surg Oncol. 2020 Jun 12; doi: 10.1002/jso.26062. PubMed PMID: 32531820.
Sun Z, Chen C, Li W, Martinez DR, Drelich A, Baek DS, Liu X, Mellors JW, Tseng CT, Baric RS, Dimitrov DS. Potent neutralization of SARS-CoV-2 by human antibody heavy-chain variable domains isolated from a large library with a new stable scaffold. MAbs. 2020 Jan 1;12(1):1778435. doi: 10.1080/19420862.2020.1778435. PubMed PMID: 32544372; PMCID: PMC7531518.
Bartlett DL, Ryan DP. The role of HIPEC in patients with advanced colorectal cancer. Clin Adv Hematol Oncol. 2020 Feb;18(2):103-105. PubMed PMID: 32558803.
Shyu S, Choudry H, Hall L, Pingpank J, Holtzman M, Bartlett D, Pai RK. Clinicopathological analysis of appendiceal goblet cell adenocarcinoma with peritoneal metastasis: World Health Organization grade predicts survival following cytoreductive surgery with intraperitoneal chemotherapy. Histopathology. 2020 Nov;77(5):798-809. doi: 10.1111/his.14189. PubMed PMID: 32557796.
Li W, Wang Q, Qi X, Lu H, Chen Y, Shi J, Wang F, Wang Z, Lu Y, Lu Z, Yan Q, Wang C, Gao SJ, Lu C. An oncogenic viral interferon regulatory factor upregulates CUB domain-containing protein 1 to promote angiogenesis by hijacking transcription factor lymphoid enhancer-binding factor 1 and metastasis suppressor CD82. Cell Death Differ. 2020 Dec;27(12):3289-3306. doi: 10.1038/s41418-020-0578-0. PubMed PMID: 32555380; PMCID: PMC7852890.
Girolami I, Pantanowitz L, Munari E, Martini M, Nocini R, Bisi N, Molteni G, Marchioni D, Ghimenton C, Brunelli M, Eccher A. Prevalence of PD-L1 expression in head and neck squamous precancerous lesions: a systematic review and meta-analysis. Head Neck. 2020 Oct;42(10):3018-3030. doi: 10.1002/hed.26339. PubMed PMID: 32567746.
Eccher A, Girolami I, Brunelli M, Novelli L, Mescoli C, Malvi D, D'Errico A, Luchini C, Furian L, Zaza G, Cardillo M, Boggi U, Pantanowitz L. Digital pathology for second opinion consultation and donor assessment during organ procurement: Review of the literature and guidance for deployment in transplant practice. Transplant Rev (Orlando). 2020 Oct;34(4):100562. doi: 10.1016/j.trre.2020.100562. PubMed PMID: 32576430.
Satturwar S, Pantanowitz L, Xing J, Schoedel K, Weber D, Monaco SE. Cytomorphology of Mycobacterium avium intracellulare-associated ascites. Diagn Cytopathol. 2020 Dec;48(12):E10-E13. doi: 10.1002/dc.24532. PubMed PMID: 32592614.
Boatz JC, Piretra T, Lasorsa A, Matlahov I, Conway JF, van der Wel PCA. Protofilament Structure and Supramolecular Polymorphism of Aggregated Mutant Huntingtin Exon 1. J Mol Biol. 2020 Jul 24;432(16):4722-4744. doi: 10.1016/j.jmb.2020.06.021. PubMed PMID: 32598938; PMCID: PMC8170701.
Patel RK, Patel YK, Smithgall TE. In Vitro Evolution Reveals a Single Mutation as Sole Source of Src-Family Kinase C-Helix-out Inhibitor Resistance. ACS Chem Biol. 2020 Aug 21;15(8):2175-2184. doi: 10.1021/acschembio.0c00373. PubMed PMID: 32602694; PMCID: PMC8136437.
Cyktor JC, Bosch RJ, Mar H, Macatangay BJ, Collier AC, Hogg E, Godfrey C, Eron JJ, McMahon DK, Mellors JW, Gandhi RT, ACTG A5321 Team.. Association of Male Sex and Obesity With Residual Plasma Human Immunodeficiency Virus 1 Viremia in Persons on Long-Term Antiretroviral Therapy. J Infect Dis. 2021 Feb 13;223(3):462-470. doi: 10.1093/infdis/jiaa373. PubMed PMID: 32603416; PMCID: PMC7881329.
Le Sage V, Kanarek JP, Snyder DJ, Cooper VS, Lakdawala SS, Lee N. Mapping of Influenza Virus RNA-RNA Interactions Reveals a Flexible Network. Cell Rep. 2020 Jun 30;31(13):107823. doi: 10.1016/j.celrep.2020.107823. PubMed PMID: 32610124; PMCID: PMC7372595.
Niksefat M, Guillen D, Moshayedi P, Rinaldo CR, Ojha A. Third time's a charm: diagnosis of herpes simplex encephalitis after two negative polymerase chain reaction results. Heliyon. 2020 Jun;6(6):e04247. doi: 10.1016/j.heliyon.2020.e04247. PubMed PMID: 32613121; PMCID: PMC7322049.
Pantanowitz L, Hartman D, Qi Y, Cho EY, Suh B, Paeng K, Dhir R, Michelow P, Hazelhurst S, Song SY, Cho SY. Accuracy and efficiency of an artificial intelligence tool when counting breast mitoses. Diagn Pathol. 2020 Jul 4;15(1):80. doi: 10.1186/s13000-020-00995-z. PubMed PMID: 32622359; PMCID: PMC7335442.
Kalra S, Tizhoosh HR, Choi C, Shah S, Diamandis P, Campbell CJV, Pantanowitz L. Yottixel - An Image Search Engine for Large Archives of Histopathology Whole Slide Images. Med Image Anal. 2020 Oct;65101757. doi: 10.1016/ PubMed PMID: 32623275.
Satturwar S, Pantanowitz L. Fine-needle aspiration of granulomatous pneumocystosis. Diagn Cytopathol. 2021 Jan;49(1):146-149. doi: 10.1002/dc.24537. PubMed PMID: 32621323.
Porteus C, Gan Q, Gong Y, Pantanowitz L, Henderson-Jackson E, Saeed-Vafa D, Mela N, Peterson D, Ahmad N, Ahmed A, Bui M. Sclerosing epithelioid fibrosarcoma: cytologic characterization with histologic, immunohistologic, molecular, and clinical correlation of 8 cases. J Am Soc Cytopathol. 2020 Nov - Dec;9(6):513-519. doi: 10.1016/j.jasc.2020.05.005. PubMed PMID: 32624384.
Feist M, Zhu Z, Dai E, Ma C, Liu Z, Giehl E, Ravindranathan R, Kowalsky SJ, Obermajer N, Kammula US, Lee AJH, Lotze MT, Guo ZS, Bartlett DL. Oncolytic virus promotes tumor-reactive infiltrating lymphocytes for adoptive cell therapy. Cancer Gene Ther. 2021 Feb;28(1-2):98-111. doi: 10.1038/s41417-020-0189-4. PubMed PMID: 32632271.
Wiley CA. Emergent Viral Infections of the CNS. J Neuropathol Exp Neurol. 2020 Aug 1;79(8):823-842. doi: 10.1093/jnen/nlaa054. PubMed PMID: 32647884.
Dell'Aquila M, Musarra T, Fiorentino V, Brunelli C, De Marco C, Raffaelli M, Traini E, Pio Lombardi C, Fadda G, Larocca LM, Pantanowitz L, Rossi ED. Relevance of rosette patterns in variants of papillary thyroid carcinoma. Cytopathology. 2020 Nov;31(6):533-540. doi: 10.1111/cyt.12885. PubMed PMID: 32654236.
Thrall MJ, Vrbin C, Barkan GA, Monaco SE, Pambuccian SE, Pantanowitz L, Pitman MB, Kurtycz DFI. Small core needle biopsies in cytology practice: a survey of members of the American Society of Cytopathology. J Am Soc Cytopathol. 2020 Sep - Oct;9(5):310-321. doi: 10.1016/j.jasc.2020.06.002. PubMed PMID: 32653451.
Farchoukh L, Hartman DJ, Ma C, Celebrezze J, Medich D, Bahary N, Frank M, Pantanowitz L, Pai RK. Intratumoral budding and automated CD8-positive T-cell density in pretreatment biopsies can predict response to neoadjuvant therapy in rectal adenocarcinoma. Mod Pathol. 2021 Jan;34(1):171-183. doi: 10.1038/s41379-020-0619-8. PubMed PMID: 32661298.
Pantanowitz L, Thompson LDR, Jing X, Rossi ED. Is thyroid core needle biopsy a valid compliment to fine-needle aspiration? J Am Soc Cytopathol. 2020 Sep - Oct;9(5):383-388. doi: 10.1016/j.jasc.2020.06.003. PubMed PMID: 32665216.
Clymer D, Kostadinov S, Catov J, Skvarca L, Pantanowitz L, Cagan J, LeDuc P. Decidual Vasculopathy Identification in Whole Slide Images Using Multiresolution Hierarchical Convolutional Neural Networks. Am J Pathol. 2020 Oct;190(10):2111-2122. doi: 10.1016/j.ajpath.2020.06.014. PubMed PMID: 32679230; PMCID: PMC7668102.
Williams BJ, Fraggetta F, Hanna MG, Huang R, Lennerz J, Salgado R, Sirintrapun SJ, Pantanowitz L, Parwani A, Zarella M, Treanor DE. The Future of Pathology: What can we Learn from the COVID-19 Pandemic? J Pathol Inform. 2020;1115. doi: 10.4103/jpi.jpi_29_20. PubMed PMID: 32685256; PMCID: PMC7363060.
Simonetti FR, White JA, Tumiotto C, Ritter KD, Cai M, Gandhi RT, Deeks SG, Howell BJ, Montaner LJ, Blankson JN, Martin A, Laird GM, Siliciano RF, Mellors JW, Siliciano JD. Intact proviral DNA assay analysis of large cohorts of people with HIV provides a benchmark for the frequency and composition of persistent proviral DNA. Proc Natl Acad Sci U S A. 2020 Aug 4;117(31):18692-18700. doi: 10.1073/pnas.2006816117. PubMed PMID: 32690683; PMCID: PMC7414172.
Harancher MR, Packard JE, Cowan SP, DeLuca NA, Dembowski JA. Antiviral Properties of the LSD1 Inhibitor SP-2509. J Virol. 2020 Sep 15;94(19): doi: 10.1128/JVI.00974-20. PubMed PMID: 32699090; PMCID: PMC7495396.
Diedrich CR, Rutledge T, Maiello P, Baranowski TM, White AG, Borish HJ, Karell P, Hopkins F, Brown J, Fortune SM, Flynn JL, Ambrose Z, Lin PL. SIV and Mycobacterium tuberculosis synergy within the granuloma accelerates the reactivation pattern of latent tuberculosis. PLoS Pathog. 2020 Jul;16(7):e1008413. doi: 10.1371/journal.ppat.1008413. PubMed PMID: 32730321; PMCID: PMC7419014.
Lee YS, Kalimuthu K, Park YS, Luo X, Choudry MHA, Bartlett DL, Lee YJ. BAX-dependent mitochondrial pathway mediates the crosstalk between ferroptosis and apoptosis. Apoptosis. 2020 Oct;25(9-10):625-631. doi: 10.1007/s10495-020-01627-z. PubMed PMID: 32737652; PMCID: PMC7529973.
Hornung R, Pritchard A, Kinchington PR, Kramer PR. Reduced activity of GAD67 expressing cells in the reticular thalamus enhance thalamic excitatory activity and varicella zoster virus associated pain. Neurosci Lett. 2020 Sep 25;736135287. doi: 10.1016/j.neulet.2020.135287. PubMed PMID: 32763361; PMCID: PMC7501271.
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Jacobs JL, Tosiano MA, Koontz DL, Staines B, Worlock A, Harrington K, Bakkour S, Stone M, Shutt K, Busch MP, Mellors JW. Automated Multireplicate Quantification of Persistent HIV-1 Viremia in Individuals on Antiretroviral Therapy. J Clin Microbiol. 2020 Nov 18;58(12): doi: 10.1128/JCM.01442-20. PubMed PMID: 32967899; PMCID: PMC7685899.
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Toptan T, Cantrell PS, Zeng X, Liu Y, Sun M, Yates NA, Chang Y, Moore PS. Proteomic approach to discover human cancer viruses from formalin-fixed tissues. JCI Insight. 2020 Nov 19;5(22): doi: 10.1172/jci.insight.143003. PubMed PMID: 33055416; PMCID: PMC7710300.
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Cai D, Yan R, Xu JZ, Zhang H, Shen S, Mitra B, Marchetti A, Kim ES, Guo H. Characterization of the Termini of Cytoplasmic Hepatitis B Virus Deproteinated Relaxed Circular DNA. J Virol. 2020 Dec 9;95(1): doi: 10.1128/JVI.00922-20. PubMed PMID: 33055252; PMCID: PMC7737736.
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Urbanek K, Sutherland DM, Orchard RC, Wilen CB, Knowlton JJ, Aravamudhan P, Taylor GM, Virgin HW, Dermody TS. Cytidine Monophosphate N-Acetylneuraminic Acid Synthetase and Solute Carrier Family 35 Member A1 Are Required for Reovirus Binding and Infection. J Virol. 2020 Dec 22;95(2): doi: 10.1128/JVI.01571-20. PubMed PMID: 33087464; PMCID: PMC7944449.
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Heise M, Dermody TS, Casadevall A, Sandri-Goldin RM, Schloss PD. The Decision To Publish Gutierrez-Alvarez et al., "Middle East Respiratory Syndrome Coronavirus Gene 5 Modulates Pathogenesis in Mice". J Virol. 2021 Jan 13;95(3): doi: 10.1128/JVI.02118-20. PubMed PMID: 33144320; PMCID: PMC7925116.
Dilly AK, Honick BD, Frederick R, Elapavaluru A, Velankar S, Makala H, Hitchens TK, Foley LM, Guo J, Beumer JH, Rigatti LH, Lee YJ, Bartlett DL, Choudry HA. Improved chemosensitivity following mucolytic therapy in patient-derived models of mucinous appendix cancer. Transl Res. 2021 Mar;229100-114. doi: 10.1016/j.trsl.2020.10.005. PubMed PMID: 33164812; PMCID: PMC7867596.
Markazi A, Bracci PM, McGrath M, Gao SJ. Pseudomonas aeruginosa Stimulates Inflammation and Enhances Kaposi's Sarcoma Herpesvirus-Induced Cell Proliferation and Cellular Transformation through both Lipopolysaccharide and Flagellin. mBio. 2020 Nov 10;11(6): doi: 10.1128/mBio.02843-20. PubMed PMID: 33173008; PMCID: PMC7667028.
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Dermody TS, DiMaio D, Enquist LW. Vaccine Safety, Efficacy, and Trust Take Time. Annu Rev Virol. 2021 Sep 29;8(1):iii-iv. doi: 10.1146/annurev-vi-08-102220-100001. PubMed PMID: 33186082.
McCormick KD, Mellors JW, Jacobs JL. Adaptation of advanced clinical virology assays from HIV-1 to SARS-CoV-2. Curr Opin HIV AIDS. 2021 Jan;16(1):3-10. doi: 10.1097/COH.0000000000000656. PubMed PMID: 33186228; PMCID: PMC7752249.
Anderko RR, Rinaldo CR, Mailliard RB. IL-18 Responsiveness Defines Limitations in Immune Help for Specialized FcRγ- NK Cells. J Immunol. 2020 Dec 15;205(12):3429-3442. doi: 10.4049/jimmunol.2000430. PubMed PMID: 33188073; PMCID: PMC7725987.
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Yun H, Yee MB, Lathrop KL, Kinchington PR, Hendricks RL, St Leger AJ. Production of the Cytokine VEGF-A by CD4+ T and Myeloid Cells Disrupts the Corneal Nerve Landscape and Promotes Herpes Stromal Keratitis. Immunity. 2020 Nov 17;53(5):1050-1062.e5. doi: 10.1016/j.immuni.2020.10.013. PubMed PMID: 33207210; PMCID: PMC7682749.
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Chopra A, Hodges JC, Olson A, Burton S, Ellsworth SG, Bahary N, Singhi AD, Boone BA, Beane JD, Bartlett D, Lee KK, Hogg ME, Lotze MT, Paniccia A, Zeh H, Zureikat AH. Outcomes of Neoadjuvant Chemotherapy Versus Chemoradiation in Localized Pancreatic Cancer: A Case-Control Matched Analysis. Ann Surg Oncol. 2021 Jul;28(7):3779-3788. doi: 10.1245/s10434-020-09391-9. PubMed PMID: 33231769; PMCID: PMC8366580.
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Satturwar SP, Rossi ED, Maleki Z, Cantley RL, Faquin WC, Pantanowitz L. Thyroid paraganglioma: A diagnostic pitfall in thyroid FNA. Cancer Cytopathol. 2021 Jun;129(6):439-449. doi: 10.1002/cncy.22390. PubMed PMID: 33232572.
Hall BL, Leronni D, Miyagawa Y, Goins WF, Glorioso JC, Cohen JB. Generation of an Oncolytic Herpes Simplex Viral Vector Completely Retargeted to the GDNF Receptor GFRα1 for Specific Infection of Breast Cancer Cells. Int J Mol Sci. 2020 Nov 21;21(22): doi: 10.3390/ijms21228815. PubMed PMID: 33233403; PMCID: PMC7700293.
Guseman AJ, Whitley MJ, González JJ, Rathi N, Ambarian M, Gronenborn AM. Assessing the Structures and Interactions of γD-Crystallin Deamidation Variants. Structure. 2021 Mar 4;29(3):284-291.e3. doi: 10.1016/j.str.2020.11.006. PubMed PMID: 33264606; PMCID: PMC7935750.
Evans AS, Lennemann NJ, Coyne CB. BPIFB3 interacts with ARFGAP1 and TMED9 to regulate non-canonical autophagy and RNA virus infection. J Cell Sci. 2021 Feb 25;134(5): doi: 10.1242/jcs.251835. PubMed PMID: 33277377; PMCID: PMC7929927.
Abere B, Zhou H, Li J, Cao S, Toptan T, Grundhoff A, Fischer N, Moore PS, Chang Y. Merkel Cell Polyomavirus Encodes Circular RNAs (circRNAs) Enabling a Dynamic circRNA/microRNA/mRNA Regulatory Network. mBio. 2020 Dec 15;11(6): doi: 10.1128/mBio.03059-20. PubMed PMID: 33323517; PMCID: PMC7773998.
Pantanowitz L, Quiroga-Garza GM, Bien L, Heled R, Laifenfeld D, Linhart C, Sandbank J, Albrecht Shach A, Shalev V, Vecsler M, Michelow P, Hazelhurst S, Dhir R. An artificial intelligence algorithm for prostate cancer diagnosis in whole slide images of core needle biopsies: a blinded clinical validation and deployment study. Lancet Digit Health. 2020 Aug;2(8):e407-e416. doi: 10.1016/S2589-7500(20)30159-X. PubMed PMID: 33328045.
Xu C, Fischer DK, Rankovic S, Li W, Dick RA, Runge B, Zadorozhnyi R, Ahn J, Aiken C, Polenova T, Engelman AN, Ambrose Z, Rousso I, Perilla JR. Permeability of the HIV-1 capsid to metabolites modulates viral DNA synthesis. PLoS Biol. 2020 Dec;18(12):e3001015. doi: 10.1371/journal.pbio.3001015. PubMed PMID: 33332391; PMCID: PMC7775124.
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Nachega JB, Sam-Agudu NA, Machekano RN, Rabie H, van der Zalm MM, Redfern A, Dramowski A, O'Connell N, Pipo MT, Tshilanda MB, Byamungu LN, Masekela R, Jeena PM, Pillay A, Gachuno OW, Kinuthia J, Ishoso DK, Amoako E, Agyare E, Agbeno EK, Martyn-Dickens C, Sylverken J, Enimil A, Jibril AM, Abdullahi AM, Amadi O, Umar UM, Sigwadhi LN, Hermans MP, Otokoye JO, Mbala-Kingebeni P, Muyembe-Tamfum JJ, Zumla A, Sewankambo NK, Aanyu HT, Musoke P, Suleman F, Adejumo P, Noormahomed EV, Deckelbaum RJ, Fowler MG, Tshilolo L, Smith G, Mills EJ, Umar LW, Siedner MJ, Kruger M, Rosenthal PJ, Mellors JW, Mofenson LM, African Forum for Research and Education in Health (AFREhealth) COVID-19 Research Collaboration on Children and Adolescents.. Assessment of Clinical Outcomes Among Children and Adolescents Hospitalized With COVID-19 in 6 Sub-Saharan African Countries. JAMA Pediatr. 2022 Mar 1;176(3):e216436. doi: 10.1001/jamapediatrics.2021.6436. PubMed PMID: 35044430; PMCID: PMC8771438.
Jacobs JL, Naqvi A, Shah FA, Boltz VF, Kearney MF, McVerry BJ, Ray P, Schaefer C, Fitzpatrick M, Methé B, Lee J, Morris A, Mellors JW, Kitsios GD, Bain W. Plasma SARS-CoV-2 RNA levels as a biomarker of lower respiratory tract SARS-CoV-2 infection in critically ill patients with COVID-19. medRxiv. 2022 Jan 11; doi: 10.1101/2022.01.10.22269018. PubMed PMID: 35043122; PMCID: PMC8764731.
Gronenborn AM. Meet the IUPAB councilor - Angela M. Gronenborn. Biophys Rev. 2021 Dec;13(6):835-838. doi: 10.1007/s12551-021-00886-7. PubMed PMID: 35059003; PMCID: PMC8724357.
Tisthammer KH, Kline C, Rutledge T, Diedrich CR, Ita S, Lin PL, Ambrose Z, Pennings PS. SIV Evolutionary Dynamics in Cynomolgus Macaques during SIV-Mycobacterium tuberculosis Co-Infection. Viruses. 2021 Dec 29;14(1): doi: 10.3390/v14010048. PubMed PMID: 35062252; PMCID: PMC8778162.
Fetters AM, Cantalupo PG, Wei N, Robles MTS, Stanley A, Stephens JD, Pipas JM, Ashman TL. The pollen virome of wild plants and its association with variation in floral traits and land use. Nat Commun. 2022 Jan 26;13(1):523. doi: 10.1038/s41467-022-28143-9. PubMed PMID: 35082293; PMCID: PMC8791949.
Dremel SE, Sivrich FL, Tucker JM, Glaunsinger BA, DeLuca NA. Manipulation of RNA polymerase III by Herpes Simplex Virus-1. Nat Commun. 2022 Feb 2;13(1):623. doi: 10.1038/s41467-022-28144-8. PubMed PMID: 35110532; PMCID: PMC8810925.
Zhang H, Fischer DK, Shuda M, Moore PS, Gao SJ, Ambrose Z, Guo H. Construction and characterization of two SARS-CoV-2 minigenome replicon systems. J Med Virol. 2022 Jun;94(6):2438-2452. doi: 10.1002/jmv.27650. PubMed PMID: 35137972; PMCID: PMC9088700.
Bosch RJ, Gandhi RT, Mar H, Eron JJ, Cyktor JC, McMahon DK, Mellors JW. Associations Between Multiple Measures of HIV-1 Persistence in Persons on Suppressive Antiretroviral Therapy. J Infect Dis. 2022 Jun 15;225(12):2163-2166. doi: 10.1093/infdis/jiac030. PubMed PMID: 35137129.
Haidar G, Agha M, Bilderback A, Lukanski A, Linstrum K, Troyan R, Rothenberger S, McMahon DK, Crandall MD, Sobolewksi MD, Enick PN, Jacobs JL, Collins K, Klamar-Blain C, Macatangay BJC, Parikh UM, Heaps A, Coughenour L, Schwartz MB, Dueker JM, Silveira FP, Keebler ME, Humar A, Luketich JD, Morrell MR, Pilewski JM, McDyer JF, Pappu B, Ferris RL, Marks SM, Mahon J, Mulvey K, Hariharan S, Updike GM, Brock L, Edwards R, Beigi RH, Kip PL, Wells A, Minnier T, Angus DC, Mellors JW. Prospective evaluation of COVID-19 vaccine responses across a broad spectrum of immunocompromising conditions: the COVICS study. Clin Infect Dis. 2022 Feb 18; doi: 10.1093/cid/ciac103. PubMed PMID: 35179197; PMCID: PMC8903515.
Ettinger AK, Landsittel D, Abebe KZ, Bey J, Chavis V, Navratil JD, Savage Friedman F, Dermody TS, Miller E, Pittsburgh Study Committee Co-Leads.. THRIVE Conceptual Framework and Study Protocol: A Community-Partnered Longitudinal Multi-Cohort Study to Promote Child and Youth Thriving, Health Equity, and Community Strength. Front Pediatr. 2021;9797526. doi: 10.3389/fped.2021.797526. PubMed PMID: 35186824; PMCID: PMC8856106.
Lentscher AJ, McAllister N, Griswold KA, Martin JL, Welsh OL, Sutherland DM, Silva LA, Dermody TS. Chikungunya virus vaccine candidate incorporating synergistic mutations is attenuated and protects against virulent virus challenge. J Infect Dis. 2022 Feb 23; doi: 10.1093/infdis/jiac066. PubMed PMID: 35196388.
Wu BW, Yee MB, Goldstein RS, Kinchington PR. Antiviral Targeting of Varicella Zoster Virus Replication and Neuronal Reactivation Using CRISPR/Cas9 Cleavage of the Duplicated Open Reading Frames 62/71. Viruses. 2022 Feb 12;14(2): doi: 10.3390/v14020378. PubMed PMID: 35215971; PMCID: PMC8880005.
Ivison GT, Vendrame E, Martínez-Colón GJ, Ranganath T, Vergara R, Zhao NQ, Martin MP, Bendall SC, Carrington M, Cyktor JC, McMahon DK, Eron J, Jones RB, Mellors JW, Bosch RJ, Gandhi RT, Holmes S, Blish CA, ACTG 5321 Team.. Natural Killer Cell Receptors and Ligands Are Associated With Markers of HIV-1 Persistence in Chronically Infected ART Suppressed Patients. Front Cell Infect Microbiol. 2022;12757846. doi: 10.3389/fcimb.2022.757846. PubMed PMID: 35223535; PMCID: PMC8866573.
Ortega-Gonzalez P, Taylor G, Jangra RK, Tenorio R, Fernandez de Castro I, Mainou BA, Orchard RC, Wilen CB, Brigleb PH, Sojati J, Chandran K, Sachse M, Risco C, Dermody TS. Reovirus infection is regulated by NPC1 and endosomal cholesterol homeostasis. PLoS Pathog. 2022 Mar;18(3):e1010322. doi: 10.1371/journal.ppat.1010322. PubMed PMID: 35263388; PMCID: PMC8906592.
Castanha PMS, Tuttle DJ, Kitsios GD, Jacobs JL, Braga-Neto U, Duespohl M, Rathod S, Marti MM, Wheeler S, Naqvi A, Staines B, Mellors J, Morris A, McVerry BJ, Shah F, Schaefer C, Macatangay BJC, Methe B, Fernandez CA, Barratt-Boyes SM, Burke D, Marques ETA. IgG response to SARS-CoV-2 and seasonal coronaviruses contributes to complement overactivation in severe COVID-19 patients. J Infect Dis. 2022 Mar 10; doi: 10.1093/infdis/jiac091. PubMed PMID: 35267024; PMCID: PMC8992249.
Zhu W, Guseman AJ, Bhinderwala F, Lu M, Su XC, Gronenborn AM. Visualizing Proteins in Mammalian Cells by 19 F NMR Spectroscopy. Angew Chem Int Ed Engl. 2022 Jun 7;61(23):e202201097. doi: 10.1002/anie.202201097. PubMed PMID: 35278268.
Feng J, Zhang T, Sorel O, Meng W, Zhang X, Lai Z, Yuan W, Chen Y, Huang Y, Gao SJ. Global profiling reveals common and distinct N6-methyladenosine (m6A) regulation of innate immune responses during bacterial and viral infections. Cell Death Dis. 2022 Mar 14;13(3):234. doi: 10.1038/s41419-022-04681-4. PubMed PMID: 35288544; PMCID: PMC8921188.
Eshleman SH, Fogel JM, Piwowar-Manning E, Chau G, Cummings V, Agyei Y, Richardson P, Sullivan P, Haines CD, Bushman LR, Petropoulos C, Persaud D, Kofron R, Hendrix CW, Anderson PL, Farrior J, Mellors J, Adeyeye A, Rinehart A, St Clair M, Ford S, Rooney JF, Mathew CA, Hunidzarira P, Spooner E, Mpendo J, Nair G, Cohen MS, Hughes JP, Hosseinipour M, Hanscom B, Delany-Moretlwe S, Marzinke MA. Characterization of Human Immunodeficiency Virus (HIV) Infections in Women Who Received Injectable Cabotegravir or Tenofovir Disoproxil Fumarate/Emtricitabine for HIV Prevention: HPTN 084. J Infect Dis. 2022 May 16;225(10):1741-1749. doi: 10.1093/infdis/jiab576. PubMed PMID: 35301540; PMCID: PMC9113509.
Zhang T, Zhang SW, Zhang SY, Ma QQ. m6Aexpress-Reader: Prediction of m6A regulated expression genes by integrating m6A sites and reader binding information in specific- context. Methods. 2022 Jul;203167-178. doi: 10.1016/j.ymeth.2022.03.008. PubMed PMID: 35314342.
Abere B, Zhou H, Shuda M, Stolz DB, Rapchak K, Moore PS, Chang Y. Replication Kinetics for a Reporter Merkel Cell Polyomavirus. Viruses. 2022 Feb 25;14(3): doi: 10.3390/v14030473. PubMed PMID: 35336880; PMCID: PMC8950423.
Deng R, Liu S, Shen S, Guo H, Sun J. Circulating hepatitis B virus RNA: From biology to clinical applications. Hepatology. 2022 Mar 28; doi: 10.1002/hep.32479. PubMed PMID: 35342969.
Aravamudhan P, Guzman-Cardozo C, Urbanek K, Welsh OL, Konopka-Anstadt JL, Sutherland DM, Dermody TS. The Murine Neuronal Receptor NgR1 Is Dispensable for Reovirus Pathogenesis. J Virol. 2022 Apr 27;96(8):e0005522. doi: 10.1128/jvi.00055-22. PubMed PMID: 35353001; PMCID: PMC9044964.
Yang DT, Gronenborn AM, Chong LT. Development and Validation of Fluorinated, Aromatic Amino Acid Parameters for Use with the AMBER ff15ipq Protein Force Field. J Phys Chem A. 2022 Apr 14;126(14):2286-2297. doi: 10.1021/acs.jpca.2c00255. PubMed PMID: 35352936; PMCID: PMC9014858.
Cyktor JC, Bosch RJ, Mar H, Macatangay BJ, Collier AC, Hogg E, Godfrey C, Eron JJ, McMahon DK, Mellors JW, Gandhi RT, ACTG A5321 Team.. Reply to Bottanelli et al. J Infect Dis. 2022 Jun 1;225(11):2051-2052. doi: 10.1093/infdis/jiac071. PubMed PMID: 35381084.
Ziegler P, Reznik AS, Kitchloo SP, Wang E, Lee SE, Green A, Myerburg MM, Sample CE, Shair KHY. Three-dimensional Models of the Nasopharynx for the Study of Epstein-Barr Virus Infection. Bio Protoc. 2022 Mar 20;12(6):e4365. doi: 10.21769/BioProtoc.4365. PubMed PMID: 35434197; PMCID: PMC8986362.
Lloyd MG, Yee MB, Flot JS, Liu D, Geiler BW, Kinchington PR, Moffat JF. Development of Robust Varicella Zoster Virus Luciferase Reporter Viruses for In Vivo Monitoring of Virus Growth and Its Antiviral Inhibition in Culture, Skin, and Humanized Mice. Viruses. 2022 Apr 15;14(4): doi: 10.3390/v14040826. PubMed PMID: 35458556; PMCID: PMC9032946.
Sun Z, Li W, Mellors JW, Orentas R, Dimitrov DS. Construction of a Large Size Human Immunoglobulin Heavy Chain Variable (VH) Domain Library, Isolation and Characterization of Novel Human Antibody VH Domains Targeting PD-L1 and CD22. Front Immunol. 2022;13869825. doi: 10.3389/fimmu.2022.869825. PubMed PMID: 35464476; PMCID: PMC9019674.
Levy L, Peterson JM, Kudrick LD, Chohan B, Bosek E, Mukui I, Mugambi M, Masyuko S, Mugurungi O, Ndlovu N, Mahaka I, Dunbar M, Hettema A, Kuwengwa RAP, Matse S, Mullick S, Greener L, O'Connor C, Pillay D, Fawzy M, Mellors JW, Parikh UM, Global Evaluation of Microbicide Sensitivity (GEMS) project.. Casting a Wide Net: HIV Drug Resistance Monitoring in Pre-Exposure Prophylaxis Seroconverters in the Global Evaluation of Microbicide Sensitivity Project. Glob Health Sci Pract. 2022 Apr 28;10(2): doi: 10.9745/GHSP-D-21-00122. PubMed PMID: 35487541; PMCID: PMC9053149.
Phillips AN, Bershteyn A, Revill P, Bansi-Matharu L, Kripke K, Boily MC, Martin-Hughes R, Johnson LF, Mukandavire Z, Jamieson L, Meyer-Rath G, Hallett TB, Ten Brink D, Kelly SL, Nichols BE, Bendavid E, Mudimu E, Taramusi I, Smith J, Dalal S, Baggaley R, Crowley S, Terris-Prestholt F, Godfrey-Faussett P, Mukui I, Jahn A, Case KK, Havlir D, Petersen M, Kamya M, Koss CA, Balzer LB, Apollo T, Chidarikire T, Mellors JW, Parikh UM, Godfrey C, Cambiano V, HIV Modelling Consortium.. Cost-effectiveness of easy-access, risk-informed oral pre-exposure prophylaxis in HIV epidemics in sub-Saharan Africa: a modelling study. Lancet HIV. 2022 May;9(5):e353-e362. doi: 10.1016/S2352-3018(22)00029-7. PubMed PMID: 35489378.
Jacobs JL, Naqvi A, Shah FA, Boltz VF, Kearney MF, McVerry BJ, Ray P, Schaefer C, Fitzpatrick M, Methé B, Lee JS, Morris A, Mellors JW, Kitsios GD, Bain W. Plasma SARS-CoV-2 RNA levels as a biomarker of lower respiratory tract SARS-CoV-2 infection in critically ill patients with COVID-19. J Infect Dis. 2022 May 2; doi: 10.1093/infdis/jiac157. PubMed PMID: 35511031.
Qi X, Yan Q, Shang Y, Zhao R, Ding X, Gao SJ, Li W, Lu C. A viral interferon regulatory factor degrades RNA-binding protein hnRNP Q1 to enhance aerobic glycolysis via recruiting E3 ubiquitin ligase KLHL3 and decaying GDPD1 mRNA. Cell Death Differ. 2022 May 10; doi: 10.1038/s41418-022-01011-1. PubMed PMID: 35538151.
Porat-Dahlerbruch G, Struppe J, Quinn CM, Gronenborn AM, Polenova T. Determination of accurate 19F chemical shift tensors with R-symmetry recoupling at high MAS frequencies (60-100 kHz). J Magn Reson. 2022 Jul;340107227. doi: 10.1016/j.jmr.2022.107227. PubMed PMID: 35568013.
Lu M, Toptygin D, Xiang Y, Shi Y, Schwieters CD, Lipinski EC, Ahn J, Byeon IL, Gronenborn AM. The Magic of Linking Rings: Discovery of a Unique Photoinduced Fluorescent Protein Crosslink. J Am Chem Soc. 2022 Jun 22;144(24):10809-10816. doi: 10.1021/jacs.2c02054. PubMed PMID: 35574633.
Lee DM, Sun A, Patil SS, Liu L, Rao AV, Trent PT, Ali AA, Liu C, Rausch JL, Presutti LD, Kaczorowski A, Schneider F, Amankulor NM, Shuda M, Duensing A. Targeting the translational machinery in gastrointestinal stromal tumors (GIST): a new therapeutic vulnerability. Sci Rep. 2022 May 18;12(1):8275. doi: 10.1038/s41598-022-12000-2. PubMed PMID: 35585158; PMCID: PMC9117308.
Gronenborn AM, Polenova T. Introduction: Biomolecular NMR Spectroscopy. Chem Rev. 2022 May 25;122(10):9265-9266. doi: 10.1021/acs.chemrev.2c00142. PubMed PMID: 35611522.
Khadem TM, Nguyen MH, Mellors JW, Bariola JR. Development of a Centralized Antimicrobial Stewardship Program Across a Diverse Health System and Early Antimicrobial Usage Trends. Open Forum Infect Dis. 2022 Jun;9(6):ofac168. doi: 10.1093/ofid/ofac168. PubMed PMID: 35615296; PMCID: PMC9126488.
Bisht P, Das B, Borodianskiy-Shteinberg T, Kinchington PR, Goldstein RS. Studies of Infection and Experimental Reactivation by Recombinant VZV with Mutations in Virally-Encoded Small Non-Coding RNA. Viruses. 2022 May 10;14(5): doi: 10.3390/v14051015. PubMed PMID: 35632756.
Sarkar S, Runge B, Russell RW, Movellan KT, Calero D, Zeinalilathori S, Quinn CM, Lu M, Calero G, Gronenborn AM, Polenova T. Atomic-Resolution Structure of SARS-CoV-2 Nucleocapsid Protein N-Terminal Domain. J Am Chem Soc. 2022 Jun 15;144(23):10543-10555. doi: 10.1021/jacs.2c03320. PubMed PMID: 35638584.
Bayer AN, Homa FL. Exposing the invader. Elife. 2022 May 30;11 doi: 10.7554/eLife.79813. PubMed PMID: 35635544.
Wang Y, Ungerleider N, Hoffman BA, Kara M, Farrell PJ, Flemington EK, Lee N, Tibbetts SA. A Polymorphism in the Epstein-Barr Virus EBER2 Noncoding RNA Drives In Vivo Expansion of Latently Infected B Cells. mBio. 2022 Jun 1;e0083622. doi: 10.1128/mbio.00836-22. PubMed PMID: 35642944.
Dermody TS, Ettinger A, Savage Friedman F, Chavis V, Miller E. The Pittsburgh Study: Learning with Communities About Child Health and Thriving. Health Equity. 2022;6(1):338-344. doi: 10.1089/heq.2021.0084. PubMed PMID: 35651357; PMCID: PMC9148643.
Biradar S, Agarwal Y, Lotze MT, Bility MT, Mailliard RB. The BLT Humanized Mouse Model as a Tool for Studying Human Gamma Delta T Cell-HIV Interactions In Vivo. Front Immunol. 2022;13881607. doi: 10.3389/fimmu.2022.881607. PubMed PMID: 35669780; PMCID: PMC9164110.
Hertzog J, Zhou W, Fowler G, Rigby RE, Bridgeman A, Blest HT, Cursi C, Chauveau L, Davenne T, Warner BE, Kinchington PR, Kranzusch PJ, Rehwinkel J. Varicella-Zoster virus ORF9 is an antagonist of the DNA sensor cGAS. EMBO J. 2022 Jun 7;e109217. doi: 10.15252/embj.2021109217. PubMed PMID: 35670106.
Joseph KW, Halvas EK, Brandt LD, Patro SC, Rausch JW, Chopra A, Mallal S, Kearney MF, Coffin JM, Mellors JW. Deep Sequencing Analysis of Individual HIV-1 Proviruses Reveals Frequent Asymmetric Long Terminal Repeats. J Virol. 2022 Jun 8;e0012222. doi: 10.1128/jvi.00122-22. PubMed PMID: 35674431.
Kim ES, Zhou J, Zhang H, Marchetti A, van de Klundert M, Cai D, Yu X, Mitra B, Liu Y, Wang M, Protzer U, Guo H. Hepatitis B virus X protein counteracts high mobility group box 1 protein-mediated epigenetic silencing of covalently closed circular DNA. PLoS Pathog. 2022 Jun;18(6):e1010576. doi: 10.1371/journal.ppat.1010576. PubMed PMID: 35679251.
Kramer PR, Umorin M, Hornung R, Kinchington PR. Neurexin 3α in the Central Amygdala has a Role in Orofacial Varicella Zoster Pain. Neuroscience. 2022 Jun 6;49616-26. doi: 10.1016/j.neuroscience.2022.06.003. PubMed PMID: 35679996.
Rodriguez D, Nayak T, Chen Y, Krishnan R, Huang Y. On the role of deep learning model complexity in adversarial robustness for medical images. BMC Med Inform Decis Mak. 2022 Jun 20;22(Suppl 2):160. doi: 10.1186/s12911-022-01891-w. PubMed PMID: 35725429.
Ward AR, Thomas AS, Stevenson EM, Huang SH, Keating SM, Gandhi RT, McMahon DK, Bosch RJ, Macatangay BJ, Cyktor JC, Eron JJ, Mellors JW, Jones RB, ACTG A5321 Team.. No evidence that circulating HIV-specific immune responses contribute to persistent inflammation and immune activation in persons on long-term ART. AIDS. 2022 Jun 23; doi: 10.1097/QAD.0000000000003301. PubMed PMID: 35730388.
Comunale MJ, Dermody TS, Peters M, Rudolph JA, Sevco M, Young S. Consumer-centric approach to enhance access to pediatric specialty care. Am J Manag Care. 2022 Jun 1;28(6):e228-e231. doi: 10.37765/ajmc.2022.89161. PubMed PMID: 35738230.